Get3 (guided entry of tail-anchored proteins factor 3, ATPase) - Rat Genome Database

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Gene: Get3 (guided entry of tail-anchored proteins factor 3, ATPase) Heterocephalus glaber
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Symbol: Get3 (Ensembl: ASNA1)
Name: guided entry of tail-anchored proteins factor 3, ATPase
RGD ID: 18917437
Description: ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane (inferred); tail-anchored membrane protein insertion into ER membrane (inferred); ASSOCIATED WITH Aicardi-Goutieres Syndrome 4 (ortholog); alpha-mannosidosis (ortholog); Charcot-Marie-Tooth disease dominant intermediate B (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: arsA arsenite transporter, ATP-binding, homolog 1; Asna1; ATPase ASNA1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624901361,352 - 368,725 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624901361,364 - 368,249 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Get3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624901361,352 - 368,725 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624901361,364 - 368,249 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
GET3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381912,737,106 - 12,748,323 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1912,737,139 - 12,748,323 (+)EnsemblGRCh38hg38GRCh38
GRCh371912,847,920 - 12,859,137 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361912,709,306 - 12,720,137 (+)NCBINCBI36Build 36hg18NCBI36
Build 341912,709,305 - 12,720,137NCBI
Celera1912,738,017 - 12,748,848 (+)NCBICelera
Cytogenetic Map19p13.13NCBI
HuRef1912,421,428 - 12,432,073 (+)NCBIHuRef
CHM1_11912,848,768 - 12,859,600 (+)NCBICHM1_1
T2T-CHM13v2.01912,861,599 - 12,872,815 (+)NCBIT2T-CHM13v2.0
Get3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,744,558 - 85,751,916 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl885,744,560 - 85,751,910 (-)EnsemblGRCm39 Ensembl
GRCm38885,017,929 - 85,025,287 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl885,017,931 - 85,025,281 (-)EnsemblGRCm38mm10GRCm38
MGSCv37887,541,830 - 87,549,177 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36887,908,036 - 87,915,383 (-)NCBIMGSCv36mm8
Celera889,312,886 - 89,320,055 (-)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.48NCBI
Get3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81940,034,675 - 40,043,064 (+)NCBIGRCr8
mRatBN7.21923,130,109 - 23,138,196 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1923,130,109 - 23,138,193 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1929,952,705 - 29,960,802 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01930,607,069 - 30,615,165 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01932,829,753 - 32,837,848 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01926,133,024 - 26,142,637 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1926,133,027 - 26,141,111 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01937,108,647 - 37,116,734 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41924,786,390 - 24,794,477 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11924,791,225 - 24,799,303 (+)NCBI
Celera1922,688,066 - 22,696,153 (+)NCBICelera
Cytogenetic Map19q11NCBI
Get3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541531,836,294 - 31,843,104 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541531,836,294 - 31,843,046 (+)NCBIChiLan1.0ChiLan1.0
GET3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22017,666,769 - 17,678,009 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11916,667,339 - 16,678,560 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01912,299,706 - 12,310,923 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11913,045,570 - 13,055,908 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1913,045,570 - 13,055,908 (+)Ensemblpanpan1.1panPan2
GET3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12049,392,662 - 49,398,662 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2049,392,662 - 49,398,664 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2049,266,281 - 49,272,270 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02049,911,098 - 49,917,088 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2049,911,099 - 49,917,111 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12049,122,172 - 49,128,161 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02049,548,511 - 49,554,497 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02049,791,179 - 49,797,169 (-)NCBIUU_Cfam_GSD_1.0
Get3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118208,496,527 - 208,502,722 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366591,851,051 - 1,858,322 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366591,851,953 - 1,858,176 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GET3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl266,251,432 - 66,260,958 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1266,251,381 - 66,261,135 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2266,632,155 - 66,641,634 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GET3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1611,426,857 - 11,437,343 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl611,426,787 - 11,437,119 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660748,359,262 - 8,370,564 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000015146   ⟹   ENSHGLP00000014996
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624901361,352 - 368,725 (+)Ensembl
RefSeq Acc Id: XM_004872381   ⟹   XP_004872438
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624901361,364 - 368,249 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004872438 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000014996
  ENSHGLP00100012886
GenBank Protein JAN99227 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004872438   ⟸   XM_004872381
- UniProtKB: A0A0P6JV78 (UniProtKB/TrEMBL),   G5BYX4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000014996   ⟸   ENSHGLT00000015146


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000010735 Ensembl, ENTREZGENE
  ENSHGLG00100009542 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000015146 ENTREZGENE
  ENSHGLT00100013032 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro Anion-transp_ATPase-like_dom UniProtKB/TrEMBL
  ATPase_ArsA/GET3 UniProtKB/TrEMBL
  ATPase_ArsA/GET3_euk UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report hgl:101711689 UniProtKB/TrEMBL
NCBI Gene Get3 ENTREZGENE
PANTHER ATPASE GET3 UniProtKB/TrEMBL
  PTHR10803 UniProtKB/TrEMBL
Pfam ArsA_ATPase UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A0P6JV78 ENTREZGENE, UniProtKB/TrEMBL
  G5BYX4 ENTREZGENE, UniProtKB/TrEMBL