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Gene: Pimreg (PICALM interacting mitotic regulator) Heterocephalus glaber

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Symbol:

Pimreg

Name:

PICALM interacting mitotic regulator

RGD ID:

18916373

Description:

ASSOCIATED WITH cone-rod dystrophy 5 (ortholog); congenital myasthenic syndrome 2A (ortholog); developmental and epileptic encephalopathy 25 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

Fam64a; family with sequence similarity 64 member A; protein FAM64A; protein PIMREG

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624786	7,568,097 - 7,573,485 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pimreg	Naked Mole-Rat	cone-rod dystrophy 5		ISO	PIMREG (Homo sapiens)	8554872	ClinVar Annotator: match by term: Cone-rod dystrophy 5	ClinVar	PMID:25741868
Pimreg	Naked Mole-Rat	congenital myasthenic syndrome 2A		ISO	PIMREG (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital myasthenic syndrome 2A	ClinVar	PMID:28492532
Pimreg	Naked Mole-Rat	developmental and epileptic encephalopathy 25		ISO	PIMREG (Homo sapiens)	8554872	ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 25	ClinVar	PMID:10615133 more ...
Pimreg	Naked Mole-Rat	Leber congenital amaurosis 4		ISO	PIMREG (Homo sapiens)	8554872	ClinVar Annotator: match by term: Leber congenital amaurosis 4	ClinVar	PMID:10615133 more ...
Pimreg	Naked Mole-Rat	very long chain acyl-CoA dehydrogenase deficiency		ISO	PIMREG (Homo sapiens)	8554872	ClinVar Annotator: match by term: Very long chain acyl-CoA dehydrogenase deficiency	ClinVar	PMID:28492532

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pimreg	Naked Mole-Rat	nucleolus	located_in	ISO	PIMREG (Homo sapiens)	9068941	PMID:16491119	HPA	GO_REF:0000052 and PMID:16491119
Pimreg	Naked Mole-Rat	nucleoplasm	located_in	ISO	PIMREG (Homo sapiens)	9068941		HPA	GO_REF:0000052

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Pimreg	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:Q13492	9068941	PMID:16491119	BHF-UCL	PMID:16491119
Pimreg	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:P04156	9068941	PMID:18482256	IntAct	PMID:18482256
Pimreg	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:P50402 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
Pimreg	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:O95273 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
Pimreg	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:O95273 more ...	9068941	PMID:26871637	IntAct	PMID:26871637

Pimreg
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624786	7,568,097 - 7,573,485 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

PIMREG
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	6,444,455 - 6,451,469 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	6,444,441 - 6,451,469 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	6,347,775 - 6,354,789 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	6,288,519 - 6,295,108 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	6,368,303 - 6,374,898 (+)	NCBI		Celera
Cytogenetic Map	17	p13.2	NCBI
HuRef	17	6,243,091 - 6,249,743 (+)	NCBI		HuRef
CHM1_1	17	6,357,166 - 6,363,816 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	6,344,181 - 6,351,199 (+)	NCBI		T2T-CHM13v2.0

Pimreg
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	71,932,867 - 71,938,197 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	71,932,858 - 71,938,196 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	72,042,428 - 72,047,372 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	72,042,032 - 72,047,370 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	71,856,004 - 71,860,872 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	71,858,697 - 71,863,565 (+)	NCBI		MGSCv36	mm8
Celera	11	79,567,398 - 79,572,265 (+)	NCBI		Celera
Cytogenetic Map	11	B4	NCBI
cM Map	11	43.81	NCBI

Pimreg
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	57,168,136 - 57,173,713 (+)	NCBI		GRCr8
mRatBN7.2	10	56,669,603 - 56,674,540 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	56,669,675 - 56,674,791 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	61,333,647 - 61,338,494 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	60,822,134 - 60,826,981 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	56,321,186 - 56,326,033 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	58,613,588 - 58,618,524 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	58,613,674 - 58,618,514 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	58,354,609 - 58,360,750 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	58,895,262 - 58,900,104 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	58,908,869 - 58,913,730 (+)	NCBI
Celera	10	55,800,601 - 55,805,442 (+)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

Pimreg
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955467	11,967,977 - 11,972,049 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955467	11,967,986 - 11,972,049 (+)	NCBI	ChiLan1.0	ChiLan1.0

PIMREG
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	14,045,457 - 14,052,099 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	16,011,515 - 16,018,156 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	6,482,837 - 6,489,480 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	6,471,520 - 6,478,156 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	6,471,520 - 6,478,156 (+)	Ensembl	panpan1.1		panPan2

PIMREG
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	30,820,867 - 30,825,169 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	30,820,867 - 30,825,300 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	30,952,548 - 30,956,850 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	30,922,550 - 30,926,870 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	30,922,550 - 30,927,714 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	30,887,362 - 30,891,663 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	30,846,408 - 30,850,707 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	31,019,761 - 31,024,063 (-)	NCBI		UU_Cfam_GSD_1.0

Pimreg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	54,366,142 - 54,371,329 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936677	1,531,220 - 1,534,208 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PIMREG
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	50,898,501 - 50,903,464 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	50,898,493 - 50,903,238 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	52,896,983 - 52,901,847 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PIMREG
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	5,824,323 - 5,829,908 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666059	15,661,861 - 15,668,468 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_004857264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013076762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AHKG01062151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GEBF01001722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_004857264 ⟹ XP_004857321

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624786	7,568,097 - 7,573,484 (-)	NCBI

RefSeq Acc Id:

XM_013076762 ⟹ XP_012932216

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624786	7,568,097 - 7,573,485 (-)	NCBI


Protein RefSeqs	XP_004857321	(Get FASTA)	NCBI Sequence Viewer
	XP_012932216	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	JAO01911	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_012932216 ⟸ XM_013076762
- Peptide Label:	isoform X1
- UniProtKB:	A0A0P6JGC9 (UniProtKB/TrEMBL), G5BW87 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_004857321 ⟸ XM_004857264
- Peptide Label:	isoform X2
- UniProtKB:	G5BW87 (UniProtKB/TrEMBL), A0AAX6PQS6 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
InterPro	RCS1	UniProtKB/TrEMBL
NCBI Gene	Pimreg	ENTREZGENE
PANTHER	PROTEIN PIMREG	UniProtKB/TrEMBL
	PTHR35819	UniProtKB/TrEMBL
Pfam	RCS1	UniProtKB/TrEMBL
UniProt	A0A0P6JGC9	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6PQS6	ENTREZGENE, UniProtKB/TrEMBL
	G5BW87	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar