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Gene: Abhd11 (abhydrolase domain containing 11) Heterocephalus glaber

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Symbol:

Abhd11

Name:

abhydrolase domain containing 11

RGD ID:

18915487

Description:

ENCODES a protein that exhibits lipase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); intestinal volvulus (ortholog); FOUND IN mitochondrial matrix (ortholog); oxoglutarate dehydrogenase complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

Abhydrolase domain-containing protein 11; protein ABHD11

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	14,093,439 - 14,095,994 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	14,093,587 - 14,099,465 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Abhd11	Naked Mole-Rat	autism spectrum disorder		ISO	ABHD11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism spectrum disorder	ClinVar	PMID:21658581 more ...
Abhd11	Naked Mole-Rat	autistic disorder		ISO	ABHD11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:21681106 and PMID:30208311
Abhd11	Naked Mole-Rat	intestinal volvulus		ISO	ABHD11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: INTESTINAL MALROTATION and FAMILIAL	ClinVar	PMID:25741868
Abhd11	Naked Mole-Rat	Neurodevelopmental Disorders		ISO	ABHD11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
Abhd11	Naked Mole-Rat	pleomorphic xanthoastrocytoma		ISO	ABHD11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Pleomorphic xanthoastrocytoma	ClinVar	PMID:28299358
Abhd11	Naked Mole-Rat	schizophrenia		ISO	ABHD11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Schizophrenia	ClinVar	PMID:21681106 and PMID:30208311
Abhd11	Naked Mole-Rat	supravalvular aortic stenosis		ISO	ABHD11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Supravalvar aortic stenosis	ClinVar	PMID:10627943 more ...
Abhd11	Naked Mole-Rat	Volvulus Of Midgut		ISO	ABHD11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Volvulus of midgut	ClinVar	PMID:25741868
Abhd11	Naked Mole-Rat	Williams-Beuren syndrome		ISO	ABHD11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Williams syndrome	ClinVar	PMID:25741868

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Abhd11	Naked Mole-Rat	mitochondrial matrix	located_in	ISO	ABHD11 (Homo sapiens)	9068941	PMID:32792488	UniProt	PMID:32792488
Abhd11	Naked Mole-Rat	mitochondrion	located_in	IEA	PANTHER:PTN000106249 and PANTHER:PTN000106254	150520179		TreeGrafter	GO_REF:0000118
Abhd11	Naked Mole-Rat	oxoglutarate dehydrogenase complex	part_of	ISO	ABHD11 (Homo sapiens)	9068941	PMID:32792488	UniProt	PMID:32792488

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Abhd11	Naked Mole-Rat	carboxylic ester hydrolase activity	enables	IEA	PANTHER:PTN000106249 and PANTHER:PTN000106254	150520179		TreeGrafter	GO_REF:0000118
Abhd11	Naked Mole-Rat	hydrolase activity	enables	IEA	UniProtKB-KW:KW-0378	150520179		UniProt	GO_REF:0000043
Abhd11	Naked Mole-Rat	lipase activity	enables	ISO	ABHD11 (Homo sapiens)	9068941	PMID:32579589	UniProt	PMID:32579589
Abhd11	Naked Mole-Rat	protein binding	enables	ISO	UniProtKB:A5D8V6 more ...	9068941	PMID:32296183	IntAct	PMID:32296183

PMID:21993625	PMID:30032202

Abhd11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	14,093,439 - 14,095,994 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	14,093,587 - 14,099,465 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

ABHD11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	73,736,094 - 73,738,802 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	73,736,094 - 73,738,852 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	73,150,424 - 73,153,132 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	72,788,363 - 72,791,120 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	68,628,612 - 68,631,377 (-)	NCBI		Celera
Cytogenetic Map	7	q11.23	NCBI
HuRef	7	69,033,148 - 69,035,914 (-)	NCBI		HuRef
CHM1_1	7	73,296,148 - 73,298,913 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	74,936,993 - 74,939,701 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	72,483,496 - 72,486,262 (-)	NCBI

Abhd11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	135,038,006 - 135,041,029 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	135,038,006 - 135,041,029 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	135,009,152 - 135,012,175 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	135,009,152 - 135,012,175 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	135,485,022 - 135,488,045 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	135,293,926 - 135,296,797 (+)	NCBI		MGSCv36	mm8
Celera	5	132,019,360 - 132,022,383 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	74.94	NCBI

Abhd11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	27,318,739 - 27,322,016 (-)	NCBI		GRCr8
mRatBN7.2	12	21,682,206 - 21,685,331 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	21,682,202 - 21,685,398 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	22,823,227 - 22,825,957 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	23,435,546 - 23,438,280 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	22,503,442 - 22,506,162 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	24,722,277 - 24,725,760 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	24,722,283 - 24,724,997 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	26,722,547 - 26,725,267 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	12	23,412,608 - 23,447,868 (-)	NCBI		Celera
Cytogenetic Map	12	q12	NCBI

Abhd11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	14,018,109 - 14,021,483 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	14,019,073 - 14,021,536 (+)	NCBI	ChiLan1.0	ChiLan1.0

ABHD11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	91,160,995 - 91,163,780 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	139,425,641 - 139,428,411 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1	7	80,889,063 - 80,891,826 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	80,889,063 - 80,891,826 (-)	Ensembl	panpan1.1		panPan2

ABHD11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	6,550,929 - 6,553,392 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	6,550,923 - 6,553,362 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	8,248,442 - 8,250,868 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	6,366,074 - 6,368,503 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	6,366,028 - 6,371,424 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	6,355,576 - 6,358,002 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	6,303,330 - 6,305,756 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	6,467,029 - 6,469,455 (+)	NCBI		UU_Cfam_GSD_1.0

Abhd11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	131,100,366 - 131,102,815 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936543	2,930,786 - 2,936,218 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936543	2,933,752 - 2,936,122 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ABHD11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	11,000,998 - 11,003,795 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	11,000,991 - 11,003,789 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	10,697,167 - 10,700,542 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ABHD11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	9,330,037 - 9,332,788 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	9,329,923 - 9,334,816 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666070	7,171,267 - 7,174,005 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_004840045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_004840046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013070503	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013070504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021254399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002393251	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AHKG01018112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH170081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSHGLT00000013248 ⟹ ENSHGLP00000013111

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla_female_1.0 Ensembl	NW_004624740	14,093,439 - 14,095,994 (+)	Ensembl

RefSeq Acc Id:

XM_004840045 ⟹ XP_004840102

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	14,093,587 - 14,097,946 (+)	NCBI

RefSeq Acc Id:

XM_004840046 ⟹ XP_004840103

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	14,093,587 - 14,097,946 (+)	NCBI

RefSeq Acc Id:

XM_013070503 ⟹ XP_012925957

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	14,093,587 - 14,099,465 (+)	NCBI

RefSeq Acc Id:

XM_013070504 ⟹ XP_012925958

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	14,093,587 - 14,099,465 (+)	NCBI

RefSeq Acc Id:

XM_021254399 ⟹ XP_021110058

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	14,093,587 - 14,095,922 (+)	NCBI

RefSeq Acc Id:

XR_002393251

Type:

NON-CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624740	14,093,587 - 14,097,946 (+)	NCBI


Protein RefSeqs	XP_004840102	(Get FASTA)	NCBI Sequence Viewer
	XP_004840103	(Get FASTA)	NCBI Sequence Viewer
	XP_012925957	(Get FASTA)	NCBI Sequence Viewer
	XP_012925958	(Get FASTA)	NCBI Sequence Viewer
	XP_021110058	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EHB08294	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSHGLP00000013111

RefSeq Acc Id:	XP_012925958 ⟸ XM_013070504
- Peptide Label:	isoform X5
- UniProtKB:	G5BG83 (UniProtKB/TrEMBL), A0AAX6QRG9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_012925957 ⟸ XM_013070503
- Peptide Label:	isoform X4
- UniProtKB:	A0AAX6QUV0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_004840103 ⟸ XM_004840046
- Peptide Label:	isoform X2
- UniProtKB:	G5BG83 (UniProtKB/TrEMBL), A0AAX6NYY9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_004840102 ⟸ XM_004840045
- Peptide Label:	isoform X1
- UniProtKB:	G5BG83 (UniProtKB/TrEMBL), A0AAX6NYW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_021110058 ⟸ XM_021254399
- Peptide Label:	isoform X3
- UniProtKB:	G5BG83 (UniProtKB/TrEMBL), A0AAX6SMU3 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
Ensembl Genes	ENSHGLG00000009372	Ensembl, ENTREZGENE
Ensembl Transcript	ENSHGLT00000013248	ENTREZGENE
Gene3D-CATH	alpha/beta hydrolase	UniProtKB/TrEMBL
InterPro	AB_hydrolase	UniProtKB/TrEMBL
	AB_hydrolase_1	UniProtKB/TrEMBL
NCBI Gene	Abhd11	ENTREZGENE
PANTHER	PROTEIN ABHD11	UniProtKB/TrEMBL
	PROTEIN ABHD11	UniProtKB/TrEMBL
Pfam	Abhydrolase_1	UniProtKB/TrEMBL
PRINTS	ABHYDROLASE	UniProtKB/TrEMBL
Superfamily-SCOP	alpha/beta-Hydrolases	UniProtKB/TrEMBL
UniProt	A0AAX6NYW6	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6NYY9	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6QRG9	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6QUV0	ENTREZGENE, UniProtKB/TrEMBL
	A0AAX6SMU3	ENTREZGENE, UniProtKB/TrEMBL
	G5BG83	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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