Rrad (RRAD, Ras related glycolysis inhibitor and calcium channel regulator) - Rat Genome Database

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Gene: Rrad (RRAD, Ras related glycolysis inhibitor and calcium channel regulator) Heterocephalus glaber
Analyze
Symbol: Rrad
Name: RRAD, Ras related glycolysis inhibitor and calcium channel regulator
RGD ID: 18906250
Description: ENCODES a protein that exhibits calcium channel regulator activity (inferred); calmodulin binding (inferred); GTP binding (inferred); INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH autosomal dominant dyskeratosis congenita 6 (ortholog); Breast Neoplasms (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN T-tubule (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: GTP-binding protein RAD
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474619,583,541 - 19,587,598 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474619,584,061 - 19,587,476 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Rrad
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474619,583,541 - 19,587,598 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474619,584,061 - 19,587,476 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
RRAD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381666,921,685 - 66,925,535 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1666,921,685 - 66,925,535 (-)EnsemblGRCh38hg38GRCh38
GRCh371666,955,588 - 66,959,438 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361665,513,089 - 65,516,920 (-)NCBINCBI36Build 36hg18NCBI36
Build 341665,513,088 - 65,516,920NCBI
Celera1651,463,841 - 51,467,698 (-)NCBICelera
Cytogenetic Map16q22.1NCBI
HuRef1652,829,691 - 52,833,549 (-)NCBIHuRef
CHM1_11668,362,590 - 68,366,447 (-)NCBICHM1_1
T2T-CHM13v2.01672,715,985 - 72,719,835 (-)NCBIT2T-CHM13v2.0
Rrad
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398105,354,702 - 105,357,921 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8105,354,702 - 105,357,959 (-)EnsemblGRCm39 Ensembl
GRCm388104,628,070 - 104,631,350 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8104,628,070 - 104,631,327 (-)EnsemblGRCm38mm10GRCm38
MGSCv378107,151,966 - 107,155,221 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368107,517,580 - 107,520,044 (-)NCBIMGSCv36mm8
Celera8108,860,666 - 108,863,921 (-)NCBICelera
Cytogenetic Map8D3NCBI
cM Map853.04NCBI
Rrad
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr819360,581 - 363,874 (+)NCBIGRCr8
mRatBN7.219354,184 - 357,424 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl19354,198 - 357,417 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx19342,318 - 345,516 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0191,109,123 - 1,112,321 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.019384,316 - 387,514 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.019561,696 - 564,929 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl19561,727 - 564,930 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.019555,959 - 559,189 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.419272,791 - 275,957 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.119272,790 - 275,957 (+)NCBI
Celera19350,432 - 353,630 (+)NCBICelera
Cytogenetic Map19p14NCBI
Rrad
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543323,426,643 - 23,438,923 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543323,426,258 - 23,439,094 (-)NCBIChiLan1.0ChiLan1.0
RRAD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21876,421,435 - 76,425,352 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11682,333,967 - 82,337,877 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01647,236,886 - 47,240,799 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11666,339,106 - 66,342,396 (-)NCBIpanpan1.1PanPan1.1panPan2
RRAD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1582,392,608 - 82,395,574 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl582,392,557 - 82,395,561 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha582,381,299 - 82,384,264 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0582,829,207 - 82,832,176 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl582,828,951 - 82,832,163 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1582,652,397 - 82,655,362 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0582,339,219 - 82,342,172 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0582,978,172 - 82,981,138 (+)NCBIUU_Cfam_GSD_1.0
Rrad
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934942,412,632 - 42,415,959 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647517,173,165 - 17,176,463 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647517,173,170 - 17,176,446 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RRAD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl627,601,695 - 27,605,083 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1627,601,692 - 27,605,127 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
RRAD
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1552,620,846 - 52,626,799 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl552,621,231 - 52,624,436 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604723,285,743 - 23,293,154 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000023886   ⟹   ENSHGLP00000023668
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462474619,583,541 - 19,587,598 (+)Ensembl
RefSeq Acc Id: XM_004843080   ⟹   XP_004843137
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474619,584,061 - 19,587,099 (+)NCBI
RefSeq Acc Id: XM_021256922   ⟹   XP_021112581
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474619,584,597 - 19,587,476 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004843137 (Get FASTA)   NCBI Sequence Viewer  
  XP_021112581 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000023668
RefSeq Acc Id: XP_004843137   ⟸   XM_004843080
- UniProtKB: A0AAX6P3Y5 (UniProtKB/TrEMBL),   G5BDH6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021112581   ⟸   XM_021256922
- UniProtKB: A0AAX6P3Y5 (UniProtKB/TrEMBL),   G5BDH6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000023668   ⟸   ENSHGLT00000023886


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000016885 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000023886 ENTREZGENE
Gene3D-CATH P-loop containing nucleotide triphosphate hydrolases UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  RGK UniProtKB/TrEMBL
  RGK_GTP-binding_reg UniProtKB/TrEMBL
  Small_GTPase UniProtKB/TrEMBL
NCBI Gene Rrad ENTREZGENE
PANTHER GTP-BINDING PROTEIN RAD UniProtKB/TrEMBL
  RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C UniProtKB/TrEMBL
Pfam Ras UniProtKB/TrEMBL
PIRSF GTP-binding_GEM UniProtKB/TrEMBL
PRINTS RASTRNSFRMNG UniProtKB/TrEMBL
PROSITE RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
SMART RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
Superfamily-SCOP P-loop containing nucleoside triphosphate hydrolases UniProtKB/TrEMBL
UniProt A0AAX6P3Y5 ENTREZGENE, UniProtKB/TrEMBL
  G5BDH6 ENTREZGENE, UniProtKB/TrEMBL