RRAD (RRAD, Ras related glycolysis inhibitor and calcium channel regulator) - Rat Genome Database

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Gene: RRAD (RRAD, Ras related glycolysis inhibitor and calcium channel regulator) Sus scrofa
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Symbol: RRAD
Name: RRAD, Ras related glycolysis inhibitor and calcium channel regulator
RGD ID: 13863016
Description: ENCODES a protein that exhibits GTPase activity (inferred); INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Cardiac Arrhythmias (ortholog); Cardiomegaly (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: GTP-binding protein RAD
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl627,601,692 - 27,605,083 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1627,601,692 - 27,605,127 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
plasma membrane  (IBA,ISO)

Molecular Function

References

Genomics

Comparative Map Data
RRAD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl627,601,692 - 27,605,083 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1627,601,692 - 27,605,127 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
RRAD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1666,921,679 - 66,925,536 (-)EnsemblGRCh38hg38GRCh38
GRCh381666,921,685 - 66,925,535 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371666,955,588 - 66,959,438 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361665,513,089 - 65,516,920 (-)NCBINCBI36hg18NCBI36
Build 341665,513,088 - 65,516,920NCBI
Celera1651,463,841 - 51,467,698 (-)NCBI
Cytogenetic Map16q22.1NCBI
HuRef1652,829,691 - 52,833,549 (-)NCBIHuRef
CHM1_11668,362,590 - 68,366,447 (-)NCBICHM1_1
Rrad
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398105,354,702 - 105,357,976 (-)NCBIGRCm39mm39
GRCm39 Ensembl8105,354,702 - 105,357,959 (-)Ensembl
GRCm388104,628,070 - 104,631,350 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8104,628,070 - 104,631,327 (-)EnsemblGRCm38mm10GRCm38
MGSCv378107,151,966 - 107,155,221 (-)NCBIGRCm37mm9NCBIm37
MGSCv368107,517,580 - 107,520,044 (-)NCBImm8
Celera8108,860,666 - 108,863,921 (-)NCBICelera
Cytogenetic Map8D3NCBI
Rrad
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.219354,184 - 357,424 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl19354,198 - 357,417 (+)Ensembl
Rnor_6.019561,696 - 564,929 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl19561,727 - 564,930 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.019555,959 - 559,189 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.419272,791 - 275,957 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.119272,790 - 275,957 (+)NCBI
Celera19350,432 - 353,630 (+)NCBICelera
Cytogenetic Map19p14NCBI
Rrad
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543323,426,643 - 23,438,923 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543323,426,258 - 23,439,094 (-)NCBIChiLan1.0ChiLan1.0
RRAD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11666,339,106 - 66,342,396 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01647,236,886 - 47,240,799 (-)NCBIMhudiblu_PPA_v0panPan3
RRAD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1582,392,608 - 82,395,574 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl582,392,557 - 82,395,561 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha582,381,299 - 82,384,264 (+)NCBI
ROS_Cfam_1.0582,829,207 - 82,832,176 (+)NCBI
UMICH_Zoey_3.1582,652,397 - 82,655,362 (+)NCBI
UNSW_CanFamBas_1.0582,339,219 - 82,342,172 (+)NCBI
UU_Cfam_GSD_1.0582,978,172 - 82,981,138 (+)NCBI
Rrad
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934942,412,632 - 42,415,959 (+)NCBI
SpeTri2.0NW_00493647517,173,170 - 17,176,446 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RRAD
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1552,620,846 - 52,626,799 (-)NCBI
ChlSab1.1 Ensembl552,621,231 - 52,624,436 (-)Ensembl
Vero_WHO_p1.0NW_02366604723,285,743 - 23,293,154 (+)NCBI
Rrad
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474619,584,061 - 19,587,476 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 2 1
Low 4 2 3 1 2 2 1
Below cutoff 5 3 2 8 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000063009   ⟹   ENSSSCP00000054338
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl627,601,692 - 27,605,083 (-)Ensembl
RefSeq Acc Id: XM_021094024   ⟹   XP_020949683
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1627,601,692 - 27,605,089 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094026   ⟹   XP_020949685
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1627,601,692 - 27,605,089 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094027   ⟹   XP_020949686
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1627,601,692 - 27,605,093 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094028   ⟹   XP_020949687
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1627,601,692 - 27,605,091 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094029   ⟹   XP_020949688
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1627,601,692 - 27,605,127 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_020949688   ⟸   XM_021094029
- Sequence:
RefSeq Acc Id: XP_020949686   ⟸   XM_021094027
- Sequence:
RefSeq Acc Id: XP_020949687   ⟸   XM_021094028
- Sequence:
RefSeq Acc Id: XP_020949683   ⟸   XM_021094024
- Sequence:
RefSeq Acc Id: XP_020949685   ⟸   XM_021094026
- Sequence:
RefSeq Acc Id: ENSSSCP00000054338   ⟸   ENSSSCT00000063009


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000036060 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070018700 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000054338 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00070030830 UniProtKB/TrEMBL
  ENSSSCP00070030835 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000063009 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00070036869 UniProtKB/TrEMBL
  ENSSSCT00070036874 UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  RAD UniProtKB/TrEMBL
  RGK UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  Small_GTPase UniProtKB/TrEMBL
  Small_GTPase_Ras-type UniProtKB/TrEMBL
NCBI Gene RRAD ENTREZGENE
PANTHER PTHR45775:SF3 UniProtKB/TrEMBL
Pfam Ras UniProtKB/TrEMBL
PIRSF GTP-binding_GEM UniProtKB/TrEMBL
PROSITE RAS UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
TIGRFAMs small_GTP UniProtKB/TrEMBL
UniProt A0A286ZSB2_PIG UniProtKB/TrEMBL
  A0A4X1UQ12_PIG UniProtKB/TrEMBL
VGNC ID VGNC:92454 ENTREZGENE