Rad51ap2 (RAD51 associated protein 2) - Rat Genome Database

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Gene: Rad51ap2 (RAD51 associated protein 2) Heterocephalus glaber
Analyze
Symbol: Rad51ap2
Name: RAD51 associated protein 2
RGD ID: 18904393
Description: ASSOCIATED WITH genetic disease (ortholog); FOUND IN protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: RAD51-associated protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624738473,782 - 480,663 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Rad51ap2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624738473,782 - 480,663 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
RAD51AP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38217,510,579 - 17,537,859 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl217,510,579 - 17,518,440 (-)EnsemblGRCh38hg38GRCh38
GRCh37217,691,846 - 17,711,681 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36217,555,467 - 17,563,187 (-)NCBINCBI36Build 36hg18NCBI36
Celera217,571,800 - 17,579,522 (-)NCBICelera
Cytogenetic Map2p24.2NCBI
HuRef217,467,067 - 17,474,789 (-)NCBIHuRef
CHM1_1217,621,382 - 17,629,106 (-)NCBICHM1_1
T2T-CHM13v2.0217,542,340 - 17,569,626 (-)NCBIT2T-CHM13v2.0
Rad51ap2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391211,506,024 - 11,513,154 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1211,506,080 - 11,512,929 (+)EnsemblGRCm39 Ensembl
GRCm381211,456,023 - 11,463,153 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1211,456,079 - 11,462,928 (+)EnsemblGRCm38mm10GRCm38
MGSCv371211,462,885 - 11,469,734 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361211,484,348 - 11,489,271 (+)NCBIMGSCv36mm8
Celera1211,804,142 - 11,810,990 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map125.58NCBI
Rad51ap2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8639,901,251 - 39,908,203 (+)NCBIGRCr8
mRatBN7.2634,182,177 - 34,189,129 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl634,182,201 - 34,189,041 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx634,477,030 - 34,483,976 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0634,792,971 - 34,799,917 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0634,265,275 - 34,272,234 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0637,144,747 - 37,151,642 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl637,144,787 - 37,151,468 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0646,895,029 - 46,901,844 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4634,917,939 - 34,924,620 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera633,580,165 - 33,586,989 (+)NCBICelera
Cytogenetic Map6q15NCBI
Rad51ap2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955469312,601 - 320,227 (-)NCBIChiLan1.0ChiLan1.0
RAD51AP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212108,988,264 - 109,016,049 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A108,992,230 - 109,019,598 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A17,495,213 - 17,505,411 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A17,621,863 - 17,629,471 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A17,621,874 - 17,629,471 (-)Ensemblpanpan1.1panPan2
RAD51AP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11712,991,562 - 12,998,975 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1712,991,746 - 12,998,945 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1712,943,494 - 12,951,120 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01713,127,543 - 13,135,164 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1713,127,728 - 13,136,088 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11712,986,247 - 12,993,879 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01712,997,378 - 13,005,006 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01713,023,398 - 13,031,026 (-)NCBIUU_Cfam_GSD_1.0
Rad51ap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629257,451,355 - 57,456,035 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493649313,383,563 - 13,387,979 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAD51AP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3120,318,249 - 120,327,406 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13120,318,238 - 120,327,050 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23128,466,321 - 128,474,910 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RAD51AP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11490,148,178 - 90,156,429 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1490,148,383 - 90,156,206 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604522,057,235 - 22,065,403 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013070046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01015401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_013070046   ⟹   XP_012925500
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624738473,782 - 480,663 (-)NCBI
Protein Sequences
Protein RefSeqs XP_012925500 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_012925500   ⟸   XM_013070046
- UniProtKB: G5AZB6 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
InterPro RAD51_interact UniProtKB/TrEMBL
NCBI Gene Rad51ap2 ENTREZGENE
PANTHER MCG1037962 UniProtKB/TrEMBL
  RAD51-ASSOCIATED PROTEIN 2 UniProtKB/TrEMBL
Pfam RAD51_interact UniProtKB/TrEMBL
UniProt G5AZB6 ENTREZGENE, UniProtKB/TrEMBL