Gpr35 (G protein-coupled receptor 35) - Rat Genome Database

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Gene: Gpr35 (G protein-coupled receptor 35) Heterocephalus glaber
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Symbol: Gpr35
Name: G protein-coupled receptor 35
RGD ID: 18904161
Description: ENCODES a protein that exhibits C-X-C chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); cytoskeleton organization (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Bethlem Myopathy 1A (ortholog); chromosome 2q37 deletion syndrome (ortholog); D-2-hydroxyglutaric aciduria 1 (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: G-protein coupled receptor 35
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248474,925,516 - 4,945,831 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248474,922,631 - 4,947,098 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Gpr35
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248474,925,516 - 4,945,831 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248474,922,631 - 4,947,098 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
GPR35
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382240,605,430 - 240,633,159 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2240,605,430 - 240,633,159 (+)EnsemblGRCh38hg38GRCh38
GRCh372241,544,847 - 241,572,576 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362241,217,468 - 241,219,342 (+)NCBINCBI36Build 36hg18NCBI36
Build 342241,288,784 - 241,290,659NCBI
Celera2235,241,148 - 235,243,022 (+)NCBICelera
Cytogenetic Map2q37.3NCBI
HuRef2233,301,477 - 233,329,054 (+)NCBIHuRef
CHM1_12241,550,880 - 241,576,585 (+)NCBICHM1_1
T2T-CHM13v2.02241,099,521 - 241,129,422 (+)NCBIT2T-CHM13v2.0
Gpr35
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39192,875,774 - 92,913,984 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl192,878,587 - 92,914,113 (+)EnsemblGRCm39 Ensembl
GRCm38192,948,052 - 92,986,391 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl192,950,865 - 92,986,391 (+)EnsemblGRCm38mm10GRCm38
MGSCv37194,869,696 - 94,882,968 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36194,809,527 - 94,815,938 (+)NCBIMGSCv36mm8
Celera195,921,390 - 95,934,813 (+)NCBICelera
Cytogenetic Map1DNCBI
cM Map146.65NCBI
Gpr35
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89100,974,580 - 100,995,330 (+)NCBIGRCr8
mRatBN7.2993,527,165 - 93,539,573 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl993,527,127 - 93,539,299 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9101,971,813 - 101,972,733 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09107,107,605 - 107,108,525 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09105,463,760 - 105,464,680 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.09100,129,428 - 100,141,269 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl9100,137,881 - 100,138,801 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0999,781,874 - 99,804,215 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4992,258,279 - 92,259,199 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1992,463,040 - 92,465,108 (+)NCBI
Celera991,072,466 - 91,073,386 (+)NCBICelera
Cytogenetic Map9q36NCBI
Gpr35
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955542851,895 - 856,688 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955542851,895 - 856,688 (-)NCBIChiLan1.0ChiLan1.0
GPR35
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213143,285,391 - 143,316,536 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B143,300,354 - 143,331,501 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B127,853,660 - 127,887,204 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B246,664,731 - 246,692,467 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B246,680,998 - 246,692,090 (+)Ensemblpanpan1.1panPan2
GPR35
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12550,566,263 - 50,841,473 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2551,036,038 - 51,050,997 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02551,017,995 - 51,032,727 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2551,016,566 - 51,032,730 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12550,859,957 - 50,874,922 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02550,605,715 - 50,620,874 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02550,882,551 - 50,897,299 (+)NCBIUU_Cfam_GSD_1.0
Gpr35
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303192,225,123 - 192,226,904 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936745993,375 - 994,373 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936745993,375 - 994,292 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR35
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15139,583,769 - 139,591,632 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115139,571,093 - 139,591,638 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GPR35
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110126,653,754 - 126,661,106 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10126,658,185 - 126,659,114 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604072,735,037 - 72,740,692 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000003808   ⟹   ENSHGLP00000003753
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248474,925,516 - 4,945,831 (+)Ensembl
RefSeq Acc Id: XM_004868442   ⟹   XP_004868499
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248474,922,631 - 4,947,098 (+)NCBI
RefSeq Acc Id: XM_004868443   ⟹   XP_004868500
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248474,939,818 - 4,947,098 (+)NCBI
RefSeq Acc Id: XM_004868444   ⟹   XP_004868501
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248474,940,047 - 4,947,098 (+)NCBI
RefSeq Acc Id: XM_021247315   ⟹   XP_021102974
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248474,922,631 - 4,947,098 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004868499 (Get FASTA)   NCBI Sequence Viewer  
  XP_004868500 (Get FASTA)   NCBI Sequence Viewer  
  XP_004868501 (Get FASTA)   NCBI Sequence Viewer  
  XP_021102974 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000003753
RefSeq Acc Id: XP_004868499   ⟸   XM_004868442
RefSeq Acc Id: XP_021102974   ⟸   XM_021247315
RefSeq Acc Id: XP_004868500   ⟸   XM_004868443
RefSeq Acc Id: XP_004868501   ⟸   XM_004868444
Ensembl Acc Id: ENSHGLP00000003753   ⟸   ENSHGLT00000003808


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000002761 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000003808 ENTREZGENE
NCBI Gene Gpr35 ENTREZGENE