Gpr35 (G protein-coupled receptor 35) - Rat Genome Database

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Gene: Gpr35 (G protein-coupled receptor 35) Mus musculus
Analyze
Symbol: Gpr35
Name: G protein-coupled receptor 35
RGD ID: 1319733
MGI Page MGI
Description: Predicted to enable C-X-C chemokine receptor activity. Involved in cytoskeleton organization. Located in plasma membrane. Is expressed in adipose tissue; bone; gut; lower urinary tract; and spleen. Orthologous to human GPR35 (G protein-coupled receptor 35).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: G-protein coupled receptor 35; KPG_007; KYNA receptor; kynurenic acid receptor
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39192,875,774 - 92,913,984 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl192,878,587 - 92,914,113 (+)EnsemblGRCm39 Ensembl
GRCm38192,948,052 - 92,986,391 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl192,950,865 - 92,986,391 (+)EnsemblGRCm38mm10GRCm38
MGSCv37194,869,696 - 94,882,968 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36194,809,527 - 94,815,938 (+)NCBIMGSCv36mm8
Celera195,921,390 - 95,934,813 (+)NCBICelera
Cytogenetic Map1DNCBI
cM Map146.65NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
plasma membrane  (IBA,IDA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9479505   PMID:10349636   PMID:11017071   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16754668  
PMID:20100464   PMID:21267068   PMID:21677750   PMID:21873635   PMID:24095869   PMID:24312407   PMID:25411203   PMID:28648739   PMID:29414686   PMID:29860395   PMID:30043283   PMID:30600262  
PMID:30973865   PMID:31202927   PMID:32523084   PMID:32755573   PMID:33839412   PMID:33990686   PMID:34201526   PMID:34275335   PMID:35087615   PMID:35123988   PMID:35148838   PMID:35264769  
PMID:35926043   PMID:36758734   PMID:37279752   PMID:37590143   PMID:38198925   PMID:38355793   PMID:38427721  


Genomics

Comparative Map Data
Gpr35
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39192,875,774 - 92,913,984 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl192,878,587 - 92,914,113 (+)EnsemblGRCm39 Ensembl
GRCm38192,948,052 - 92,986,391 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl192,950,865 - 92,986,391 (+)EnsemblGRCm38mm10GRCm38
MGSCv37194,869,696 - 94,882,968 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36194,809,527 - 94,815,938 (+)NCBIMGSCv36mm8
Celera195,921,390 - 95,934,813 (+)NCBICelera
Cytogenetic Map1DNCBI
cM Map146.65NCBI
GPR35
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382240,605,430 - 240,633,159 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2240,605,430 - 240,633,159 (+)EnsemblGRCh38hg38GRCh38
GRCh372241,544,847 - 241,572,576 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362241,217,468 - 241,219,342 (+)NCBINCBI36Build 36hg18NCBI36
Build 342241,288,784 - 241,290,659NCBI
Celera2235,241,148 - 235,243,022 (+)NCBICelera
Cytogenetic Map2q37.3NCBI
HuRef2233,301,477 - 233,329,054 (+)NCBIHuRef
CHM1_12241,550,880 - 241,576,585 (+)NCBICHM1_1
T2T-CHM13v2.02241,099,521 - 241,129,422 (+)NCBIT2T-CHM13v2.0
Gpr35
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89100,974,580 - 100,995,330 (+)NCBIGRCr8
mRatBN7.2993,527,165 - 93,539,573 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl993,527,127 - 93,539,299 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9101,971,813 - 101,972,733 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09107,107,605 - 107,108,525 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09105,463,760 - 105,464,680 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.09100,129,428 - 100,141,269 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl9100,137,881 - 100,138,801 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0999,781,874 - 99,804,215 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4992,258,279 - 92,259,199 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1992,463,040 - 92,465,108 (+)NCBI
Celera991,072,466 - 91,073,386 (+)NCBICelera
Cytogenetic Map9q36NCBI
Gpr35
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955542851,895 - 856,688 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955542851,895 - 856,688 (-)NCBIChiLan1.0ChiLan1.0
GPR35
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213143,285,391 - 143,316,536 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B143,300,354 - 143,331,501 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B127,853,660 - 127,887,204 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B246,664,731 - 246,692,467 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B246,680,998 - 246,692,090 (+)Ensemblpanpan1.1panPan2
GPR35
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12550,566,263 - 50,841,473 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2551,036,038 - 51,050,997 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02551,017,995 - 51,032,727 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2551,016,566 - 51,032,730 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12550,859,957 - 50,874,922 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02550,605,715 - 50,620,874 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02550,882,551 - 50,897,299 (+)NCBIUU_Cfam_GSD_1.0
Gpr35
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303192,225,123 - 192,226,904 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936745993,375 - 994,373 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936745993,375 - 994,292 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR35
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15139,583,769 - 139,591,632 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115139,571,093 - 139,591,638 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GPR35
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110126,653,754 - 126,661,106 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10126,658,185 - 126,659,114 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604072,735,037 - 72,740,692 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gpr35
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248474,925,516 - 4,945,831 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248474,922,631 - 4,947,098 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2993
Count of miRNA genes:588
Interacting mature miRNAs:706
Transcripts:ENSMUST00000027489, ENSMUST00000064480, ENSMUST00000169198
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
15039333Nmrs1_mNAFLD-associated magnetic resonance shift 1 (mouse)189786512123786512Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174991977133290937Mouse
4142394Mssq1_mmandible size and shape QTL 1 (mouse)Not determined73615692107615830Mouse
1300821Lore1_mloss of righting induced by ethanol 1 (mouse)Not determined17554919192941077Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1558928Mord2_mmodifier of retinal degeneration 2 (mouse)Not determined177123115110536075Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
14697706Stsl3a_mSalmonella typhimurium susceptibility locus 3a (mouse)17747663795827725Mouse
12790991Aath1_maortic arch atherosclerosis 1 (mouse)186483929120483929Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse
10412238Alpq5_malcohol preference QTL 5 (mouse)Not determined182832635116832635Mouse
1302146Cocrb1_mcocaine related behavior 1 (mouse)Not determined170133533104139557Mouse
1357760Synch3_msynechia 3 (mouse)Not determined192901442126901550Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
4141347Reb1_mrepetitive behavior 1 (mouse)Not determined91468266100413667Mouse
12791004Aath7_maortic arch atherosclerosis 7 (mouse)182832635116832635Mouse
4141725Wbcq4_mwhite blood cell quantitative locus 4 (mouse)Not determined179858683113858791Mouse
12050069Nabq1_mnasal bone morphology QTL 1 (mouse)179858683113858791Mouse
1300976Bmd19_mbone mineral density 19 (mouse)Not determined173266214108838414Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74516235148715579Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)175976637148775742Mouse
27095931Pglq1_mpelvic girdle length QTL 1, 5 week (mouse)175976637128527737Mouse
13452395Leusq2_mleucocytosis susceptibility QTL 2 (mouse)180245593126386517Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162946755120529678Mouse
1301304Hrq3_mheart rate quantitative locus 3 (mouse)Not determined173615692107615830Mouse
1357439Popoa_mpremature ovulation and primary oocyte arrest (mouse)Not determined182643189135615379Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173755175147125370Mouse
4141329Mleu1_mmyeloid leukemia survival 1 (mouse)Not determined89786512123786512Mouse
11667074Led2_mlate embryonic death 2 (mouse)185696027117195081Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167339159129727737Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782291982147125370Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163920002153557562Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001104529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_022320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC119846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF200349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK089198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY205822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY233205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000027489   ⟹   ENSMUSP00000027489
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,900,844 - 92,913,975 (+)Ensembl
GRCm38.p6 Ensembl192,973,122 - 92,986,253 (+)Ensembl
Ensembl Acc Id: ENSMUST00000064480   ⟹   ENSMUSP00000070832
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,903,069 - 92,913,586 (+)Ensembl
GRCm38.p6 Ensembl192,975,347 - 92,985,864 (+)Ensembl
Ensembl Acc Id: ENSMUST00000169198   ⟹   ENSMUSP00000126914
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,906,644 - 92,914,113 (+)Ensembl
GRCm38.p6 Ensembl192,978,922 - 92,986,391 (+)Ensembl
Ensembl Acc Id: ENSMUST00000185421   ⟹   ENSMUSP00000139817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,878,587 - 92,910,408 (+)Ensembl
GRCm38.p6 Ensembl192,950,865 - 92,982,686 (+)Ensembl
Ensembl Acc Id: ENSMUST00000186298   ⟹   ENSMUSP00000139648
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,900,844 - 92,912,766 (+)Ensembl
GRCm38.p6 Ensembl192,973,122 - 92,985,044 (+)Ensembl
Ensembl Acc Id: ENSMUST00000189697   ⟹   ENSMUSP00000139787
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl192,883,886 - 92,910,731 (+)Ensembl
GRCm38.p6 Ensembl192,956,164 - 92,983,009 (+)Ensembl
RefSeq Acc Id: NM_001104529   ⟹   NP_001097999
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39192,900,841 - 92,913,977 (+)NCBI
GRCm38192,973,119 - 92,986,391 (+)NCBI
MGSCv37194,869,696 - 94,882,968 (+)RGD
Celera195,921,390 - 95,934,813 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001271766   ⟹   NP_001258695
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39192,903,069 - 92,913,977 (+)NCBI
GRCm38192,975,347 - 92,986,391 (+)NCBI
Celera195,921,390 - 95,934,813 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001412853   ⟹   NP_001399782
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39192,878,587 - 92,913,977 (+)NCBI
RefSeq Acc Id: NM_022320   ⟹   NP_071715
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39192,906,650 - 92,913,977 (+)NCBI
GRCm38192,978,903 - 92,986,391 (+)NCBI
MGSCv37194,869,696 - 94,882,968 (+)RGD
Celera195,921,390 - 95,934,813 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006529777   ⟹   XP_006529840
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39192,890,060 - 92,913,984 (+)NCBI
GRCm38192,962,331 - 92,986,262 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529779   ⟹   XP_006529842
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39192,908,838 - 92,913,984 (+)NCBI
GRCm38192,981,122 - 92,986,262 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529780   ⟹   XP_006529843
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39192,875,774 - 92,913,984 (+)NCBI
GRCm38192,948,052 - 92,986,262 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011248053   ⟹   XP_011246355
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39192,878,482 - 92,913,984 (+)NCBI
GRCm38192,950,755 - 92,986,262 (+)NCBI
Sequence:
RefSeq Acc Id: NP_071715   ⟸   NM_022320
- UniProtKB: Q9ES90 (UniProtKB/Swiss-Prot),   Q3TBY9 (UniProtKB/TrEMBL),   Q8CB97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001097999   ⟸   NM_001104529
- UniProtKB: Q9ES90 (UniProtKB/Swiss-Prot),   Q3TBY9 (UniProtKB/TrEMBL),   Q8CB97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258695   ⟸   NM_001271766
- UniProtKB: Q9ES90 (UniProtKB/Swiss-Prot),   Q3TBY9 (UniProtKB/TrEMBL),   Q8CB97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529843   ⟸   XM_006529780
- Peptide Label: isoform X2
- UniProtKB: Q9ES90 (UniProtKB/Swiss-Prot),   Q3TBY9 (UniProtKB/TrEMBL),   Q8CB97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529840   ⟸   XM_006529777
- Peptide Label: isoform X1
- UniProtKB: Q8CB97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529842   ⟸   XM_006529779
- Peptide Label: isoform X2
- UniProtKB: Q9ES90 (UniProtKB/Swiss-Prot),   Q3TBY9 (UniProtKB/TrEMBL),   Q8CB97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011246355   ⟸   XM_011248053
- Peptide Label: isoform X2
- UniProtKB: Q9ES90 (UniProtKB/Swiss-Prot),   Q3TBY9 (UniProtKB/TrEMBL),   Q8CB97 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000027489   ⟸   ENSMUST00000027489
Ensembl Acc Id: ENSMUSP00000139648   ⟸   ENSMUST00000186298
Ensembl Acc Id: ENSMUSP00000139817   ⟸   ENSMUST00000185421
Ensembl Acc Id: ENSMUSP00000126914   ⟸   ENSMUST00000169198
Ensembl Acc Id: ENSMUSP00000070832   ⟸   ENSMUST00000064480
Ensembl Acc Id: ENSMUSP00000139787   ⟸   ENSMUST00000189697
RefSeq Acc Id: NP_001399782   ⟸   NM_001412853
- UniProtKB: Q9ES90 (UniProtKB/Swiss-Prot),   Q3TBY9 (UniProtKB/TrEMBL)
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9ES90-F1-model_v2 AlphaFold Q9ES90 1-307 view protein structure

Promoters
RGD ID:6874520
Promoter ID:EPDNEW_M711
Type:multiple initiation site
Name:Gpr35_1
Description:Mus musculus G protein-coupled receptor 35 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38192,973,119 - 92,973,179EPDNEW
RGD ID:6817862
Promoter ID:MM_KWN:1665
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:ENSMUST00000027489,   NM_001104529
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36194,868,841 - 94,869,727 (+)MPROMDB
RGD ID:6817863
Promoter ID:MM_KWN:1667
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:NM_022320
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36194,875,456 - 94,875,956 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1929509 AgrOrtholog
Ensembl Genes ENSMUSG00000026271 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027489.9 UniProtKB/TrEMBL
  ENSMUST00000064480 ENTREZGENE
  ENSMUST00000064480.7 UniProtKB/Swiss-Prot
  ENSMUST00000169198 ENTREZGENE
  ENSMUST00000169198.3 UniProtKB/Swiss-Prot
  ENSMUST00000185421.2 UniProtKB/TrEMBL
  ENSMUST00000186298 ENTREZGENE
  ENSMUST00000186298.7 UniProtKB/Swiss-Prot
  ENSMUST00000189697.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro 7tmA_GPR35 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:64095 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1929509 ENTREZGENE
NCBI Gene 64095 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G-PROTEIN COUPLED RECEPTOR 35 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gpr35 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WPI1_MOUSE UniProtKB/TrEMBL
  A0A087WPK8_MOUSE UniProtKB/TrEMBL
  A0A0A0MQ77_MOUSE UniProtKB/TrEMBL
  GPR35_MOUSE UniProtKB/Swiss-Prot
  Q3TBY9 ENTREZGENE, UniProtKB/TrEMBL
  Q3TU48_MOUSE UniProtKB/TrEMBL
  Q8BS98_MOUSE UniProtKB/TrEMBL
  Q8CB97 ENTREZGENE, UniProtKB/TrEMBL
  Q9ES90 ENTREZGENE