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Gene: CDIN1 (CDAN1 interacting nuclease 1) Chlorocebus sabaeus

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Symbol:

CDIN1

Name:

CDAN1 interacting nuclease 1

RGD ID:

18789303

Description:

INVOLVED IN erythrocyte differentiation (inferred); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); congenital dyserythropoietic anemia (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

C26H15orf41; CDAN1-interacting nuclease 1; chromosome 26 open reading frame, human C15orf41; uncharacterized protein C15orf41 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	46,135,826 - 46,364,476 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	46,137,567 - 46,363,393 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	94,560,730 - 94,788,034 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

congenital dyserythropoietic anemia (ISO)

congenital dyserythropoietic anemia type Ib (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

erythrocyte differentiation (IEA)

Cellular Component

cytoplasm (IEA)

nucleus (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

CDIN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	46,135,826 - 46,364,476 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	46,137,567 - 46,363,393 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	94,560,730 - 94,788,034 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

CDIN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	36,579,626 - 36,810,244 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	36,579,626 - 36,810,248 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	36,871,827 - 37,102,445 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	34,720,098 - 34,889,739 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	13,631,911 - 13,862,498 (+)	NCBI		Celera
Cytogenetic Map	15	q14	NCBI
HuRef	15	13,717,858 - 13,948,394 (+)	NCBI		HuRef
CHM1_1	15	36,990,382 - 37,221,015 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	34,385,147 - 34,615,722 (+)	NCBI		T2T-CHM13v2.0

Cdin1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	115,411,388 - 115,609,263 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	115,412,197 - 115,609,249 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	115,580,907 - 115,778,774 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	115,581,716 - 115,778,768 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	115,407,452 - 115,604,504 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	115,273,217 - 115,470,209 (+)	NCBI		MGSCv36	mm8
Celera	2	116,724,725 - 116,922,914 (+)	NCBI		Celera
Cytogenetic Map	2	E4	NCBI
cM Map	2	58.18	NCBI

Cdin1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	122,895,754 - 123,101,099 (+)	NCBI		GRCr8
mRatBN7.2	3	102,441,553 - 102,646,935 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	102,441,704 - 102,646,682 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	106,097,270 - 106,302,329 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	114,696,296 - 114,901,360 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	112,351,477 - 112,563,803 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	107,142,734 - 107,347,381 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	107,142,762 - 107,348,650 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	113,709,675 - 113,914,205 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	101,607,751 - 101,811,485 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	101,386,865 - 101,590,149 (+)	NCBI		Celera
Cytogenetic Map	3	q35	NCBI

Cdin1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	3,805,341 - 4,015,232 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	3,805,968 - 4,014,328 (+)	NCBI	ChiLan1.0	ChiLan1.0

CDIN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	25,802,134 - 26,033,531 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	29,956,934 - 30,187,299 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	15,503,685 - 15,734,015 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	33,761,827 - 33,992,100 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	33,762,079 - 33,990,777 (+)	Ensembl	panpan1.1		panPan2

CDIN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	4,129,366 - 4,356,771 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	4,129,082 - 4,341,136 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	4,184,136 - 4,411,392 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	4,251,032 - 4,478,505 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	4,251,216 - 4,478,949 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	4,179,015 - 4,406,403 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	4,276,695 - 4,503,833 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	4,410,703 - 4,638,214 (+)	NCBI		UU_Cfam_GSD_1.0

Cdin1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	82,652,970 - 82,867,769 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	500,978 - 715,885 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	501,005 - 715,208 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CDIN1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	134,301,103 - 134,538,461 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	134,301,076 - 134,538,874 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	150,140,420 - 150,271,986 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Cdin1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624804	3,881,189 - 4,121,527 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624804	3,881,789 - 4,199,472 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CDIN1
5253 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008017110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008017111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008017112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008017113	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038009811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000005252 ⟹ ENSCSAP00000003477

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	26	46,137,567 - 46,363,393 (-)	Ensembl

RefSeq Acc Id:

XM_008017110 ⟹ XP_008015301

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	26	46,135,826 - 46,364,059 (-)	NCBI
Vero_WHO_p1.0	NW_023666048	94,560,730 - 94,788,034 (+)	NCBI

Sequence:

show sequence

TTTTCTGAGAATTGGATTACAAAGACAATAAGATGTGATTTTAGTCCTTAAGCAGCTCACTGCA
AGGAGTGAAAGTGACATTCTTTACTGCCAGCTGTTTGATGACGTCGGATTTGTTTCAAGTCTGC
TTCTCAACAAGGACAAAACTGCCTTCCACGCGATGTAGAGAAGTTGTAGGACTTCCTCAACACA
AGCTAAACTATGTTTACAGCGACCCTAGTGAGTCGCTCGACCCATGACAGACTTGGTGGAGTGA
AGACGTGGTTTCTCGGCAGGCCGGTCTCCGAGGAGCGCTCAAACTGGCGCGTTAGGAAGTGTAT
TCAAATCGCGCGCTCCGGCAGGGGCTTTCGGGGGCTCACGCTGAAGGATCGCGGGGCACTCATG
AGACCTGCCTCCTGGTCTGTGCGTCAGGCCGCCCTGGCTTCTAGTAATTGGGAGAGTACAAAGC
ATTCCTTGTTAATCCTTTGATCCCAGGTGGGCGATGCCTGGGATACCTATCTGCCAGCTGAAAC
TCTGGCGCGGCGCCTTTCCAAGGGTGGCTGCTACTTCCTGGTTGGTTTGCCCTTAACTGACATG
GCGGCTAGCTGCCTTCGGCCGCACCCACTGCGGCTGCTCAGTAAGCCAAGCACGGGCACTCCGG
TGTACAGCCCGCCCCCGCCGCGGAGGTGCCGGTGGAGCTTGAGACCGGGCGAGTGTCCGCCCCG
CTTTTGCAGCTAGGGGTGTGTTTCAGGGGGGATTGGGGCAAACCGAGCAGGCGAGGACCCGGGC
CTGTGCCGCTGTTTGCCTATCCCTCATCCCTCGGCACCAAGGCTACTCGAGCCCCTGGGTGTTT
TTTCCTTGTTCCCGCCACCTCCTGGTCCCTGGCCCAACATGATACTGACCAAAGCTCAGTACGA
GGAGATAGCCCAGTGCCTAGTGTCTGTGCCGCCCACCAGGCAGAGCCTGAGGAAGCTGAAGCAG
AGGTTTCCCAGTCAATCGCAGGCCACTCTGCTGAGCATCTTCTCCCAGGAGTACCAGAAACACA
TTAAAAGAACACATGCCAAGCATCATACTTCGGAAGCAATTGAAAGTTATTACCAGAGGTACCT
GAATGGAGTGGTGAAAAATGGAGCTGCCCCAGTGCTCCTGGACCTGGCCAATGAGGTGGACTAT
GCACCCTCATTAATGGCTCGGCTTATACTGGAGAGATTTCTACAGGAACATGAGGAAACTGCAC
CCTCCAAGTCTGTTATAAATAGTATGCTACGGGACCCTTCTCAGATTCCAGATGGAGTTCTAGC
AAATCAGGTCTATCAGTGCATTGTGAACGACTGCTGTTATGGACCACTGGTGGACTGCATCAAG
CATGCCATTGGTCATGAGCATGAAGTCCTGCTGAGAGACTTACTTCTAGAGAAAAACCTGTCCT
TCCTTGATGAAGATCAGCTCCGTGCAAAGGGTTATGACAAAACACCAGACTTTATTTTACAAGT
ACCAGTTGCTGTAGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAA
TGTAGCCACCACGCCTACCTGCATGACCAGTTCTGGAGCTACTGGAATAGATTTGGGCCAGGCT
TAGTCATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCT
CAAAGCCTGTTTCCCTACGAACATTGTCACCTTATGCCACAGCATAGCTTGACCCTGAAGATCC
TGGAAGAGAAGCTGGGAGGAAAAGAGACCCAGCGCTGCATTACCATCGTGGAATAATCTAGCAC
AAACCTAGGAAAGCTGAAGCCACAAAGTCCGAAGCCACCTTTGCACTCACCTGCAGAGCTCCAG
AAGACCTTGACGGCAGCCCGCCTATGCTGTGTGTTTGCTGTATTCAATCTTTACGGCTTCCTGA
CTTCTGTGACAGTAAGCCAAGCTGCAAAAATACACTTGATGAGAATTTCCTCTTTTAATAATGT
TCTTTGAACACCAAATATTTTCGATTTATCTTATTTGAAAGTATTAGTTCCATTGTGCCTGGAA
ACCACACTCCTTTAGATTGGGGGCCGAGAGGAGACGACCCAACATTGAGAAGAGTTTATTTTTA
AACATGGTTAGTTGTCAGTATGTACGTGAGTTAGTATTTTTATGAGTGGAGTTTTTTAAAGGCA
CATTCTGTATACTGCTTAGTGTATGCATTTTATACCATGTAATTATATAACACTCAAATAAGTT
CAGCATTAGAAATGTTTAGCTTTGTATGAACTAAGTGTGCCAGAAATAAACCTGGAGCAGTTTT
TAAATAAGCAAAATAAAGGAGATTTTTCTATTTGTTCACTTTATTCACTTTCATGTACTTTTAT
GTACTGCAAATCAGATTTCAGTCTAAAGCGAAACATCAATAAGTTAATAATAAACCTATCTTTT
GGGAAGTTGAATATTAATCTGTACCCAAAACGTATTTAGTAAAATATTTGCTACAGCATTATAA
AACATAACTTTTATAATGTTGAATAGATGATTTGGCAAATACTAACAACAACAATGTAACTTTT
GCAGACAGCTGTAACTTACATACGTTGCTTGATTTTTTTCAAAAGACTAAATATGTCATTTATA
CTTTGTTCATTTTCTACCAAAGAAGGTTTGGAAAAATATGCCTGCTGCCTTTCCTTTTGAAGGA
CACAAACCTGGTCCAAACATGTGTGGATTTTAACTCTGAGTGGGGTGCATTAAATCAAAAGAGA
GAGGAAGAAGATGAAATGCTAAAGAAGTATCAGGCAAACTTCTGTTTCAGTATAAAATTCATCC
TGCAGGCTTCTGAGTGAAACAGAATGATTTGAAACCACTACTGTATTGCCTGGATACACACACA
CACACACACACACTTTATACAAAAATGTTAAAAGCAGGTTTCCTGGCATGTTCTTAACTGTTTT
TTCTTTAGGAATAAATTACATTTATCTGCACAGATGTTGAGAATCCTGTTAAACCCTCGTCAAG
GATTTGTTTATTTTACATTAAACAAATTTATGATGAACGTGAACAAATAAATTAAAAAATAAAA
AAGGTA

hide sequence

RefSeq Acc Id:

XM_008017111 ⟹ XP_008015302

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	26	46,135,826 - 46,364,065 (-)	NCBI
Vero_WHO_p1.0	NW_023666048	94,560,738 - 94,788,034 (+)	NCBI

Sequence:

show sequence

CTACTATTTTCTGAGAATTGGATTACAAAGACAATAAGATGTGATTTTAGTCCTTAAGCAGCTC
ACTGCAAGGAGTGAAAGTGACATTCTTTACTGCCAGCTGTTTGATGACGTCGGATTTGTTTCAA
GTCTGCTTCTCAACAAGGACAAAACTGCCTTCCACGCGATGTAGAGAAGTTGTAGGACTTCCTC
AACACAAGCTAAACTATGTTTACAGCGACCCTAGTGAGTCGCTCGACCCATGACAGACTTGGTG
GAGTGAAGACGTGGTTTCTCGGCAGGCCGGTCTCCGAGGAGCGCTCAAACTGGCGCGTTAGGAA
GTGTATTCAAATCGCGCGCTCCGGCAGGGGCTTTCGGGGGCTCACGCTGAAGGATCGCGGGGCA
CTCATGAGACCTGCCTCCTGGTCTGTGCGTCAGGCCGCCCTGGCTTCTAGTAATTGGGAGAGTA
CAAAGCATTCCTTGTTAATCCTTTGATCCCAGGTGGGCGATGCCTGGGATACCTATCTGCCAGC
TGAAACTCTGGCGCGGCGCCTTTCCAAGGGTGGCTGCTACTTCCTGGTTGGTTTGCCCTTAACT
GACATGGCGGCTAGCTGCCTTCGGCCGCACCCACTGCGGCTGCTCAGTAAGCCAAGCACGGGCA
CTCCGGTGTACAGCCCGCCCCCGCCGCGGAGGTGCCGGTGGAGCTTGAGACCGGGCGAGTGTCC
GCCCCGCTTTTGCAGCTAGGGGTGTGTTTCAGGGGGGATTGGGGCAAACCGAGCAGGCGAGGAC
CCGGGCCTGTGCCGCTGTTTGCCTATCCCTCATCCCTCGGCACCAAGGCTACTCGAGCCCCTGG
GTGTTTTTTCCTTGTTCCCGCCACCTCCTGGTCCCTGGCCCAACATGATACTGACCAAAGCTCA
GTACGAGGAGATAGCCCAGTGCCTAGTGTCTGTGCCGCCCACCAGGCAGAGCCTGAGGAAGCTG
AAGCAGAGGTTTCCCAGGTACCTGAATGGAGTGGTGAAAAATGGAGCTGCCCCAGTGCTCCTGG
ACCTGGCCAATGAGGTGGACTATGCACCCTCATTAATGGCTCGGCTTATACTGGAGAGATTTCT
ACAGGAACATGAGGAAACTGCACCCTCCAAGTCTGTTATAAATAGTATGCTACGGGACCCTTCT
CAGATTCCAGATGGAGTTCTAGCAAATCAGGTCTATCAGTGCATTGTGAACGACTGCTGTTATG
GACCACTGGTGGACTGCATCAAGCATGCCATTGGTCATGAGCATGAAGTCCTGCTGAGAGACTT
ACTTCTAGAGAAAAACCTGTCCTTCCTTGATGAAGATCAGCTCCGTGCAAAGGGTTATGACAAA
ACACCAGACTTTATTTTACAAGTACCAGTTGCTGTAGAAGGGCACATAATTCACTGGATTGAAA
GCAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCTACCTGCATGACCAGTTCTGGAGCTA
CTGGAATAGATTTGGGCCAGGCTTAGTCATCTATTGGTATGGATTTATCCAGGAGCTGGACTGC
AACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCTACGAACATTGTCACCTTATGCCACA
GCATAGCTTGACCCTGAAGATCCTGGAAGAGAAGCTGGGAGGAAAAGAGACCCAGCGCTGCATT
ACCATCGTGGAATAATCTAGCACAAACCTAGGAAAGCTGAAGCCACAAAGTCCGAAGCCACCTT
TGCACTCACCTGCAGAGCTCCAGAAGACCTTGACGGCAGCCCGCCTATGCTGTGTGTTTGCTGT
ATTCAATCTTTACGGCTTCCTGACTTCTGTGACAGTAAGCCAAGCTGCAAAAATACACTTGATG
AGAATTTCCTCTTTTAATAATGTTCTTTGAACACCAAATATTTTCGATTTATCTTATTTGAAAG
TATTAGTTCCATTGTGCCTGGAAACCACACTCCTTTAGATTGGGGGCCGAGAGGAGACGACCCA
ACATTGAGAAGAGTTTATTTTTAAACATGGTTAGTTGTCAGTATGTACGTGAGTTAGTATTTTT
ATGAGTGGAGTTTTTTAAAGGCACATTCTGTATACTGCTTAGTGTATGCATTTTATACCATGTA
ATTATATAACACTCAAATAAGTTCAGCATTAGAAATGTTTAGCTTTGTATGAACTAAGTGTGCC
AGAAATAAACCTGGAGCAGTTTTTAAATAAGCAAAATAAAGGAGATTTTTCTATTTGTTCACTT
TATTCACTTTCATGTACTTTTATGTACTGCAAATCAGATTTCAGTCTAAAGCGAAACATCAATA
AGTTAATAATAAACCTATCTTTTGGGAAGTTGAATATTAATCTGTACCCAAAACGTATTTAGTA
AAATATTTGCTACAGCATTATAAAACATAACTTTTATAATGTTGAATAGATGATTTGGCAAATA
CTAACAACAACAATGTAACTTTTGCAGACAGCTGTAACTTACATACGTTGCTTGATTTTTTTCA
AAAGACTAAATATGTCATTTATACTTTGTTCATTTTCTACCAAAGAAGGTTTGGAAAAATATGC
CTGCTGCCTTTCCTTTTGAAGGACACAAACCTGGTCCAAACATGTGTGGATTTTAACTCTGAGT
GGGGTGCATTAAATCAAAAGAGAGAGGAAGAAGATGAAATGCTAAAGAAGTATCAGGCAAACTT
CTGTTTCAGTATAAAATTCATCCTGCAGGCTTCTGAGTGAAACAGAATGATTTGAAACCACTAC
TGTATTGCCTGGATACACACACACACACACACACACTTTATACAAAAATGTTAAAAGCAGGTTT
CCTGGCATGTTCTTAACTGTTTTTTCTTTAGGAATAAATTACATTTATCTGCACAGATGTTGAG
AATCCTGTTAAACCCTCGTCAAGGATTTGTTTATTTTACATTAAACAAATTTATGATGAACGTG
AACAAATAAATTAAAAAATAAAAAAGGTA

hide sequence

RefSeq Acc Id:

XM_008017112 ⟹ XP_008015303

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	26	46,135,826 - 46,334,731 (-)	NCBI
Vero_WHO_p1.0	NW_023666048	94,589,332 - 94,788,034 (+)	NCBI

Sequence:

show sequence

CATCACCTTTCCTGGGCCAGAAGATACAGGCCTGGGGATCCAGACCAGTCAATCGCAGGCCACT
CTGCTGAGCATCTTCTCCCAGGAGTACCAGAAACACATTAAAAGAACACATGCCAAGCATCATA
CTTCGGAAGCAATTGAAAGTTATTACCAGAGGTACCTGAATGGAGTGGTGAAAAATGGAGCTGC
CCCAGTGCTCCTGGACCTGGCCAATGAGGTGGACTATGCACCCTCATTAATGGCTCGGCTTATA
CTGGAGAGATTTCTACAGGAACATGAGGAAACTGCACCCTCCAAGTCTGTTATAAATAGTATGC
TACGGGACCCTTCTCAGATTCCAGATGGAGTTCTAGCAAATCAGGTCTATCAGTGCATTGTGAA
CGACTGCTGTTATGGACCACTGGTGGACTGCATCAAGCATGCCATTGGTCATGAGCATGAAGTC
CTGCTGAGAGACTTACTTCTAGAGAAAAACCTGTCCTTCCTTGATGAAGATCAGCTCCGTGCAA
AGGGTTATGACAAAACACCAGACTTTATTTTACAAGTACCAGTTGCTGTAGAAGGGCACATAAT
TCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCTACCTGCATGAC
CAGTTCTGGAGCTACTGGAATAGATTTGGGCCAGGCTTAGTCATCTATTGGTATGGATTTATCC
AGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCTACGAACATTGT
CACCTTATGCCACAGCATAGCTTGACCCTGAAGATCCTGGAAGAGAAGCTGGGAGGAAAAGAGA
CCCAGCGCTGCATTACCATCGTGGAATAATCTAGCACAAACCTAGGAAAGCTGAAGCCACAAAG
TCCGAAGCCACCTTTGCACTCACCTGCAGAGCTCCAGAAGACCTTGACGGCAGCCCGCCTATGC
TGTGTGTTTGCTGTATTCAATCTTTACGGCTTCCTGACTTCTGTGACAGTAAGCCAAGCTGCAA
AAATACACTTGATGAGAATTTCCTCTTTTAATAATGTTCTTTGAACACCAAATATTTTCGATTT
ATCTTATTTGAAAGTATTAGTTCCATTGTGCCTGGAAACCACACTCCTTTAGATTGGGGGCCGA
GAGGAGACGACCCAACATTGAGAAGAGTTTATTTTTAAACATGGTTAGTTGTCAGTATGTACGT
GAGTTAGTATTTTTATGAGTGGAGTTTTTTAAAGGCACATTCTGTATACTGCTTAGTGTATGCA
TTTTATACCATGTAATTATATAACACTCAAATAAGTTCAGCATTAGAAATGTTTAGCTTTGTAT
GAACTAAGTGTGCCAGAAATAAACCTGGAGCAGTTTTTAAATAAGCAAAATAAAGGAGATTTTT
CTATTTGTTCACTTTATTCACTTTCATGTACTTTTATGTACTGCAAATCAGATTTCAGTCTAAA
GCGAAACATCAATAAGTTAATAATAAACCTATCTTTTGGGAAGTTGAATATTAATCTGTACCCA
AAACGTATTTAGTAAAATATTTGCTACAGCATTATAAAACATAACTTTTATAATGTTGAATAGA
TGATTTGGCAAATACTAACAACAACAATGTAACTTTTGCAGACAGCTGTAACTTACATACGTTG
CTTGATTTTTTTCAAAAGACTAAATATGTCATTTATACTTTGTTCATTTTCTACCAAAGAAGGT
TTGGAAAAATATGCCTGCTGCCTTTCCTTTTGAAGGACACAAACCTGGTCCAAACATGTGTGGA
TTTTAACTCTGAGTGGGGTGCATTAAATCAAAAGAGAGAGGAAGAAGATGAAATGCTAAAGAAG
TATCAGGCAAACTTCTGTTTCAGTATAAAATTCATCCTGCAGGCTTCTGAGTGAAACAGAATGA
TTTGAAACCACTACTGTATTGCCTGGATACACACACACACACACACACACTTTATACAAAAATG
TTAAAAGCAGGTTTCCTGGCATGTTCTTAACTGTTTTTTCTTTAGGAATAAATTACATTTATCT
GCACAGATGTTGAGAATCCTGTTAAACCCTCGTCAAGGATTTGTTTATTTTACATTAAACAAAT
TTATGATGAACGTGAACAAATAAATTAAAAAATAAAAAAGGTA

hide sequence

RefSeq Acc Id:

XM_008017113 ⟹ XP_008015304

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	26	46,197,703 - 46,364,476 (-)	NCBI
Vero_WHO_p1.0	NW_023666048	94,560,730 - 94,728,704 (+)	NCBI

Sequence:

show sequence

GCCTGGGCGGCAGAGTAAGACCCCATCTCTAAATCAAACATACACAGATAAAACACCCCCATGA
ATTAAATCAGTTTTACAGACAAAAGAAATGAGGCTTCGATGGATTAAGGAATTTATTCAAGGAG
GTGTATCTAAAACTTCCAACCCAGGCATTAATCCAGGTGAAAAATTTTAAACCACTTACAGGTT
CTCTAAAGTCTAAGCACCTTTGCTTTCATTTGCTTAACTTGTTGAAATCAGAAGAGAAACACAA
CACACGACCTTCTAAGAACCAAAGAGATTTCAGAAAAGAGATTACAGGAGGGACTGATATCCCA
ATAAATTGCTTTAGGAGAACTGAGATCCATTCATAATATATATGGAAAACAAAAAAAGATTGGC
TCATTACTCCAAACATTTATTGAGCGCCTACTATTTTCTGAGAATTGGATTACAAAGACAATAA
GATGTGATTTTAGTCCTTAAGCAGCTCACTGCAAGGAGTGAAAGTGACATTCTTTACTGCCAGC
TGTTTGATGACGTCGGATTTGTTTCAAGTCTGCTTCTCAACAAGGACAAAACTGCCTTCCACGC
GATGTAGAGAAGTTGTAGGACTTCCTCAACACAAGCTAAACTATGTTTACAGCGACCCTAGTGA
GTCGCTCGACCCATGACAGACTTGGTGGAGTGAAGACGTGGTTTCTCGGCAGGCCGGTCTCCGA
GGAGCGCTCAAACTGGCGCGTTAGGAAGTGTATTCAAATCGCGCGCTCCGGCAGGGGCTTTCGG
GGGCTCACGCTGAAGGATCGCGGGGCACTCATGAGACCTGCCTCCTGGTCTGTGCGTCAGGCCG
CCCTGGCTTCTAGTAATTGGGAGAGTACAAAGCATTCCTTGTTAATCCTTTGATCCCAGGTGGG
CGATGCCTGGGATACCTATCTGCCAGCTGAAACTCTGGCGCGGCGCCTTTCCAAGGGTGGCTGC
TACTTCCTGGTTGGTTTGCCCTTAACTGACATGGCGGCTAGCTGCCTTCGGCCGCACCCACTGC
GGCTGCTCAGTAAGCCAAGCACGGGCACTCCGGTGTACAGCCCGCCCCCGCCGCGGAGGTGCCG
GTGGAGCTTGAGACCGGGCGAGTGTCCGCCCCGCTTTTGCAGCTAGGGGTGTGTTTCAGGGGGG
ATTGGGGCAAACCGAGCAGGCGAGGACCCGGGCCTGTGCCGCTGTTTGCCTATCCCTCATCCCT
CGGCACCAAGGCTACTCGAGCCCCTGGGTGTTTTTTCCTTGTTCCCGCCACCTCCTGGTCCCTG
GCCCAACATGATACTGACCAAAGCTCAGTACGAGGAGATAGCCCAGTGCCTAGTGTCTGTGCCG
CCCACCAGGCAGAGCCTGAGGAAGCTGAAGCAGAGGTTTCCCAGTCAATCGCAGGCCACTCTGC
TGAGCATCTTCTCCCAGGAGTACCAGAAACACATTAAAAGAACACATGCCAAGCATCATACTTC
GGAAGCAATTGAAAGTTATTACCAGAGGTACCTGAATGGAGTGGTGAAAAATGGAGCTGCCCCA
GTGCTCCTGGACCTGGCCAATGAGGTGGACTATGCACCCTCATTAATGGCTCGGCTTATACTGG
AGAGATTTCTACAGGAACATGAGGAAACTGCACCCTCCAAGTCTGTTATAAATAGTATGCTACG
GGACCCTTCTCAGATTCCAGATGGAGTTCTAGCAAATCAGGTCTATCAGTGCATTGTGAACGAC
TGCTGTTATGGACCACTGGTGGACTGCATCAAGCATGCCATTGGTCATGAGCATGAAGTCCTGC
TGAGAGACTTACTTCTAGAGAAAAACCTGTCCTTCCTTGATGAAGATCAGCTCCGTGCAAAGGG
TTATGACAAAACACCAGACTTTATTTTACAAGTACCAGTTGCTGTAGAAGGGCACATAATTCAC
TGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCTACCTGCATGACCAGT
TCTGGAGCTACTGGAATAGAGGTGGGATCTCACAATGTTGCTCAGGCTGGTGTGGAACTCCTGG
GCTCAGCAATTCTTCTGCCTCAGCCTCCCAAAGTGCTGGAATTACAGGGATGAGGAAACATTTT
CTACCAGGAATCTTGATGAAATGTGTTTGTAAATAACGAAAACATTTTCAAATTGTTGGAAATG
TCTTAGCAGTTAGTGCATTAAAAGAAAAAAAGTTTCAACCAGCCTGTGTTTCCTCATCTTAAAC
AATGAGTAGCAATGTTTGCAAAATGTGTGTTACATTCTCTCTCTAAATAAAAGTTGATAGTTCC
CGTAACACTTGTAACAAACATTTCTGGGTGTCAGAATAATTTGCCTTTCAGGTCATTCCAAAGT
AAATTTATTTTTAAAGAATTTACGTGCAGTTGCAAAAAAAGGGCTCCCAAAAAAGAGACGGCTG
TTGCACGGCTTCAGTTGGCCTAGAGTTTTCATTTATTCCATGCTCTTTTTTATAAGTGAACTTT
TCTCAAAGTTGTGTTTCTCTTCTTAACTTTCATTCATAAAGGTAAGTGTCTTTATTTCCTCGAA
AAGCTTTTTTCATTAGAATTAAGCAGAAGTTTTCTTTAAAAAAATCACAGACTTACAGTCTTTT
TAGAGCTAGCCAAGATCTCTCATAGATATAATCTAATTTCATGAGTGAGGAAACCGAGGCCCAG
GGAGATTTAAGTCACTCAATGTTGAACACTGATCAGTGGGTTGAGTAAAATCTTTAAAAACAGA
AATGAATTGAGTTAACATTTATGGTAGGAATTGTTTTAATTTCACAAGTAGTTAGTATTATATA
ACCGCTATCTACCACTTTGACACAGAGAACTCTTTGAATACCAAAACATTTTTCTTAATAATTA
GTGGTAGCCAATATTATCAGACCCTGAGCCAACCACATGCTGACCTAATAGAAGACCTGAGGAT
TTTTCACCCTGAGTCTTGTTCCCTTGCTGCTGCATAACACTACACTCTGCATTAAAATCAGCTA
ATGAGGATTTTAGAAATTTAACCATGAAGGGAAATAGTCTAGAAGTTATTTATTCATTAGCTAC
AACCCAAGAAGCAATGTAGCTGAGTAGAACGGGCACAGGTCTTGGGGAGTGGCAGAGCTGAGTA
GAACAGGCACAGGTCTTGGGGAGTGGCAGTGGGAATAACTTTGGTTCTCATTTGGTCCC

hide sequence

RefSeq Acc Id:

XM_038009811 ⟹ XP_037865739

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666048	94,560,739 - 94,788,034 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_008015301	(Get FASTA)	NCBI Sequence Viewer
	XP_008015302	(Get FASTA)	NCBI Sequence Viewer
	XP_008015303	(Get FASTA)	NCBI Sequence Viewer
	XP_008015304	(Get FASTA)	NCBI Sequence Viewer
	XP_037865739	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000003477
	ENSCSAP00000003477.1

RefSeq Acc Id:	XP_008015302 ⟸ XM_008017111
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_008015301 ⟸ XM_008017110
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R4D8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008015303 ⟸ XM_008017112
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_008015304 ⟸ XM_008017113
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSCSAP00000003477 ⟸ ENSCSAT00000005252

RefSeq Acc Id:	XP_037865739 ⟸ XM_038009811
- Peptide Label:	isoform X4

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000007208	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000005252.1	UniProtKB/TrEMBL
InterPro	C15orf41	UniProtKB/TrEMBL
KEGG Report	csab:103245879	UniProtKB/TrEMBL
NCBI Gene	C26H15orf41	ENTREZGENE
PANTHER	CDAN1-INTERACTING NUCLEASE 1	UniProtKB/TrEMBL
	PTHR31661	UniProtKB/TrEMBL
Pfam	TPD	UniProtKB/TrEMBL
UniProt	A0A0D9R4D8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-09-09	CDIN1	CDAN1 interacting nuclease 1	C26H15orf41	chromosome 26 open reading frame, human C15orf41	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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