Symbol:
MMP20
Name:
matrix metallopeptidase 20
RGD ID:
18774249
Description:
ENCODES a protein that exhibits hydrolase activity (inferred); metal ion binding (inferred); metalloendopeptidase activity (inferred); INVOLVED IN amelogenesis (inferred); collagen catabolic process (inferred); extracellular matrix disassembly (inferred); ASSOCIATED WITH amelogenesis imperfecta hypomaturation type 2A2 (ortholog); amelogenesis imperfecta type 1C (ortholog); asphyxiating thoracic dystrophy (ortholog); FOUND IN extracellular matrix (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
matrix metalloproteinase-20
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 1 93,946,136 - 93,997,656 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 1 93,947,582 - 93,996,815 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666043 31,863,724 - 31,912,227 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
MMP20 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 1 93,946,136 - 93,997,656 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 1 93,947,582 - 93,996,815 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666043 31,863,724 - 31,912,227 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
MMP20 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 11 102,576,832 - 102,625,332 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 11 102,576,832 - 102,625,332 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 11 102,447,563 - 102,496,063 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 11 101,952,776 - 102,001,273 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 11 101,952,775 - 102,001,273 NCBI Celera 11 99,609,116 - 99,657,267 (-) NCBI Celera Cytogenetic Map 11 q22.2 NCBI HuRef 11 98,374,581 - 98,423,040 (-) NCBI HuRef CHM1_1 11 102,330,639 - 102,378,769 (-) NCBI CHM1_1 T2T-CHM13v2.0 11 102,579,028 - 102,627,492 (-) NCBI T2T-CHM13v2.0
Mmp20 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 9 7,628,232 - 7,674,969 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 9 7,628,232 - 7,674,980 (+) Ensembl GRCm39 Ensembl GRCm38 9 7,628,231 - 7,674,968 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 9 7,628,231 - 7,674,979 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 9 7,628,231 - 7,674,968 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 9 7,628,240 - 7,674,979 (+) NCBI MGSCv36 mm8 Celera 9 5,018,752 - 5,065,648 (+) NCBI Celera Cytogenetic Map 9 A1 NCBI cM Map 9 2.46 NCBI
Mmp20 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 8 13,074,279 - 13,114,894 (+) NCBI GRCr8 mRatBN7.2 8 4,789,415 - 4,830,035 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 8 4,789,415 - 4,830,035 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 8 8,748,991 - 8,789,552 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 8 7,046,772 - 7,087,333 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 8 5,049,092 - 5,089,708 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 8 5,823,147 - 5,875,555 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 8 5,833,359 - 5,875,232 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 8 5,826,487 - 5,877,399 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 8 4,467,263 - 4,507,865 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 8 4,467,232 - 4,507,654 (+) NCBI Celera 8 6,348,869 - 6,389,463 (+) NCBI Celera Cytogenetic Map 8 q11 NCBI
Mmp20 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955412 5,815,450 - 5,869,016 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955412 5,815,450 - 5,869,016 (-) NCBI ChiLan1.0 ChiLan1.0
MMP20 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 9 103,369,818 - 103,419,591 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 11 104,459,433 - 104,507,921 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 11 97,518,573 - 97,566,881 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 11 101,011,084 - 101,059,322 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 11 101,011,084 - 101,059,322 (-) Ensembl panpan1.1 panPan2
MMP20 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 29,106,717 - 29,154,628 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 29,106,717 - 29,155,071 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 29,054,854 - 29,102,065 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 29,158,125 - 29,205,612 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 29,158,125 - 29,205,612 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 29,193,037 - 29,240,434 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 29,072,357 - 29,119,832 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 29,247,616 - 29,295,291 (+) NCBI UU_Cfam_GSD_1.0
Mmp20 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404947 86,183,414 - 86,226,115 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936551 5,310,426 - 5,352,883 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936551 5,310,426 - 5,352,883 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
MMP20 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 9 33,261,443 - 33,308,047 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 9 33,261,448 - 33,308,047 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 9 37,208,054 - 37,254,669 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
Mmp20 (Heterocephalus glaber - naked mole-rat)
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCSAT00000001247 ⟹ ENSCSAP00000014830
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 Ensembl 1 93,947,582 - 93,996,815 (-) Ensembl
RefSeq Acc Id:
XM_008020664 ⟹ XP_008018855
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 1 93,946,136 - 93,997,656 (-) NCBI Vero_WHO_p1.0 NW_023666043 31,863,724 - 31,912,227 (+) NCBI
Sequence:
GGAAATATCTTTTTAAAAATTTAATTTTGCTTCGTCTGACTCTAAGTGCTTTTCCCACCATATGATACCATTTCACCATATCATCTCTGGATCAAAATCCATCTTAATCAGACCAGAAAAAAACAATA TGACTCCAATTAACCAGAGTGCGCATAGATTGGGGAGTTCTGGTTAATGTTTTGGTTAACTAAGACATAACTCTTGTCTTAATTTATTCAAAGGCTTTCTAACAGTTATCGGTTCGCTTTCCACCCTA CGTCAGCACAGTATAATGTAATCTTGCCTTGATGATTCAGGATCTTATGTGTCTCAGAGCCGTCATTATGAACAGCAGTGGCTACTGAAAAATTTTGAAGTGAATGCAGAAGATAGAGGCGATTAGGT TGAATGCATGGGGAGTTTGGGATTACTTGGAGGACAAATTCAATTATACTGTAATCATCTATCTTTTCTGTAATCAGAATGGCAAAAGGTCCCCAAATTAAGACTAATCAAATGTTTCAGCTGAGTTG GGTTCAAATCAATCAAGTTTACTTCAATTTGTGTAACTAGCTGACAAACTTTATTAAAAGTGACTGTTCTCCTTTTGCCACTTGGCAAATAACAAAAAAAAAAAAAAAAAAAAAAAAAAATGAAGCTT TCCCTGATTTCTGTGTACAGTTGTGTTACCCCATCATCAGGGAGAGAAATGAGCTGTATAATTACTGTTTGAGACATGAATCATCCTTGCTCAGAGGGTCCAGACCTGTTTGACTCTATAAAAGGAGC TCAAGGTCGAAGTGCAAACGTGCACTGTCTGCCATCCCCCAGGCTGATATAATTACCAAGCTACTGTGAGGGGATGAAGGTGCTCCCTGCATCTGGCCTTGCTGTCCTCCTCATCATGGCTTTGAAGT TTTCCACTGCAGCCCCCTCCCTAGTTGCAGCCTCCCCCAGGACCTGGAGGAACAACTACCGCCTCGCACAGGCGTATCTTGACAAATATTACACAAATAAAGAAGGACACCAGATTGGTGAGATGGTT GCAAGAGGAGGCAATTCCATGGTAAGGAAGATTAAGGAGCTACAGGCGTTCTTTGGCCTCCGAGTCACCGGGAAGTTAGACCAGACCACAATGGACGTGATCAAGAAGCCGCGCTGTGGAGTTCCTGA TGTGGCCAATTATCGCCTCTTCCCTGGTGAACCCAAATGGAAAAAAAATATTTTGACGTACAGAGTATCTAAATACACAACCTCCATGAGTTCTGCCGAGGTGGAAAAAGCAGTGCAGATGGCCTTGC AGGCCTGGAGTAGCGCCGTCCCTCTGAGCTTTGTCAGAATAAACTCAGGAGAAGCGGATATTATGATATCTTTTGAAAATGGAGATCATGGGGATTCCTATCCATTCGATGGGCCTCGGGGGACTCTA GCCCATGCATTTGCTCCTGGAGAAGGCCTGGGAGGAGATACACATTTCGACAATGCTGAGAAGTGGACTATGGGAACGAATGGTTTTAATTTGTTTACCGTTGCTGCTCATGAATTTGGTCATGCCCT GGGCCTGGCCCATTCCACAGACCCATCAGCACTGATGTACCCAACGTATAAGTACCAGAATCCCTATGGATTCCACCTCCCCAAAGATGATGTGAAAGGGATCCAGGCATTATACGGACCTCGGAAAC CATTCCTGGGGAAGCCCATGGTGCCCCATGCCCCCGCTCACAAGCCATCCACCCCCGACCTCTGTGACTCCAGCTCATCCTTTGACGCAGTGACAATGCTGGGGAAGGAGCTCCTGCTCTTCAAGGGC CGGATTTTCTGGAGACGGCAGGTTCACTTGCGGACAGGAATTCGGCCCAGCACTATTACCAGCTCCTTCCCTCAGCTCATGTCCAATGTGGATGCAGCTTACGAAGTGGCTGAGAGGGGCATTGCTTA CTTCTTCAAAGGTCCCCACTACTGGATAACAAGAGGATTCCAAATGCAAGGTCCTCCTCGAACTATTTATGACTTTGGATTTCCAAGGCACGTGCAGCGAATAGATGCTGCTGTCTACCTCAGGGAGC CACAGAAGACCCTTTTCTTTGTGGGAGATGAATACTACAGCTACGATGAACGGAAAAGGAAAATGGAAAAAGACTATCCAAAGAATACTGAAGAAGAATTTTCAGGAGTAAATGGCCAAATCGATGCT GCTGTAGAATTAAATGGCTACATTTACTTCTTTTCAGGACCAAAAACATACAAGTATGACACAGAGAAGGAAGATGTGGTTAGTGTGGTGAAATCTAGTTCCTGGATTGGTTGCTAAATAGAAAAGCC TAGTCTTCCCAAGCAATGAGGACGACTGCAAGCAGCTTCTAACTGGATCTTAAGGACTAAAGCAGAATATAGGACAGGGATTCTTCCCATGGCCTTCAAATCAAATTAGAATTCATTGAGAAAAATAA TACTTCCAAATTTTTTCATAGTTGTATAATCAGAATCCACATTAGAAAGTTCCTATATGGACACCTCTATACAAAATCCGAATCAACACAACGCCCTCTGCAGTTAGACACCATTATTTTTTTCTTAC CTAATATACTGAAGCAAATTGATCAGTTTGATTTTTATTTCCAGAAGGAAGACTAGTGGTGGATCCCACGACATATATTTTAATTCTTTTCACAGGAAATGTCATTACCGTATGAATTATAATTATTT GCAAGCAATGGCTTTTGTGGCCATCATTTGGCCATCATTTGTTATAATAAATATAAATTTCCCAATTTTTACTTAAAAGACATCACAACAAAATACTGCATAAGAGTTGTTTCTTGTGTGTTTAACTT TGTGTCTACTCACTGGTCTCTGATGTAGGCTTAGGTGGATAAACCTATTCAAATAAATTTTCATAGTAGGCAAGAGACGGGCACTCTGCAACTGGAAAATTTTTTAACAAAAGCTAATAAAATGTTTT AATAGAACAGTTCCTCTTTTCTTTTTTCTGTTAATATTTACTTGCTTCTGTAATACTTTATTTGGCCACCCACACATCCTGTGTACCTACAGAAAAATTAAACCATAAGATAGCATCATAAGTACACA GACCCAGAAAAAGATAACAGTAACTCATTCTACTTCCTGCTTCCTGAAAACAGCCTCAGTGACCCAGCTAAGTGAGTGTCTTTTGAATAGTCTTCCATTCAGGGAAGTTCATCTTTTTGTTTTAGTTT TTCTTACTTCAAGCTAAACCTTTTTCCACTACCTAGTGATCAGTATAGATAAAACTATGGCTCTGTCATTCTTATAATTTTGCTTTAGTCTTAGTCTCTAGAATATAAAGATTCTAAAATATTTTAGT GGTTCTAAAATTGAATGATAAAATACTTGTAATACTTCATAGACCTCCTGATACATCTACAGTGTTTAACAGATGCTACTATTGTTACCATCATTTATTAAATTTGTTTCATACAGTCACTTAAAAGA CCTAATATTAAGAAGCGTTGGGGTAGTTACTCAAGATTATTCTACATTTTCCATTTGGTTTCTGTTACTGGAAGTGGCCACTTATAGTCCACCAGATGTTGAATATTTGTTGAAGACAAGGTCTGGCA TCCTTGCCTTCTAATGTCAAGGGTGCTTCTATAGAGGAAAAAAGTCACTTTTGCAAAAACTGCTAAGAAGGACTTCTTACTATCAATAAGCAAGGAGGAAAACAGGCTGGCAATTTCTTAAAATGTTT AATGTAGACTTACCCTATGACACAGCA
hide sequence
RefSeq Acc Id:
XP_008018855 ⟸ XM_008020664
- UniProtKB:
A0A0D9S1U1 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSCSAP00000014830 ⟸ ENSCSAT00000001247