MAPRE3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 14 | 80,598,660 - 80,610,519 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 80,598,029 - 80,656,243 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 31,483,308 - 31,541,490 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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MAPRE3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 2 | 26,970,637 - 27,027,219 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 26,970,637 - 27,027,219 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 27,193,505 - 27,250,087 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 27,047,029 - 27,103,591 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 27,105,175 - 27,161,737 | NCBI | | | | | Celera | 2 | 27,039,865 - 27,096,433 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | p23.3 | NCBI | | | | | HuRef | 2 | 26,935,669 - 26,992,235 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 27,123,437 - 27,179,999 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 27,012,305 - 27,068,902 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Mapre3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 30,972,075 - 31,023,447 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 30,971,985 - 31,023,450 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 30,814,606 - 30,866,106 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 30,814,641 - 30,866,106 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 31,117,129 - 31,168,479 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 31,091,337 - 31,142,687 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 28,293,934 - 28,345,490 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | B1 | NCBI | | | | | cM Map | 5 | 16.9 | NCBI | | | | |
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Mapre3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 6 | 31,233,736 - 31,278,626 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 25,513,800 - 25,558,876 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 25,513,800 - 25,558,881 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 25,814,084 - 25,825,198 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 26,129,947 - 26,141,061 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 25,609,146 - 25,620,313 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 26,878,738 - 26,923,459 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 26,878,744 - 26,889,882 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 36,695,659 - 36,739,831 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 25,496,282 - 25,506,449 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 25,499,234 - 25,509,402 (-) | NCBI | | | | | Celera | 6 | 25,004,257 - 25,015,289 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q14 | NCBI | | | | |
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Mapre3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955469 | 9,000,940 - 9,005,454 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955469 | 8,947,324 - 9,005,401 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MAPRE3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 12 | 99,488,346 - 99,544,668 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 99,492,313 - 99,548,635 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 26,970,010 - 27,026,223 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 27,059,002 - 27,115,223 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 27,102,780 - 27,115,223 (+) | Ensembl | panpan1.1 | | panPan2 | |
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MAPRE3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 17 | 20,971,868 - 21,027,634 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 17 | 21,015,464 - 21,026,845 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 20,864,475 - 20,920,006 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 21,292,052 - 21,347,806 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 21,291,904 - 21,349,898 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 17 | 20,980,681 - 21,034,969 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 20,991,765 - 21,046,054 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 21,038,213 - 21,092,479 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mapre3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024406292 | 65,302,728 - 65,321,420 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936493 | 5,518,116 - 5,536,952 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936493 | 5,518,124 - 5,522,760 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MAPRE3 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 3 | 112,084,469 - 112,136,061 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 112,084,467 - 112,136,079 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 119,083,232 - 119,135,332 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Mapre3 (Heterocephalus glaber - naked mole-rat) |
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