LOC103242761 (C-C motif chemokine 23) - Rat Genome Database

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Gene: LOC103242761 (C-C motif chemokine 23) Chlorocebus sabaeus
Analyze
Symbol: LOC103242761
Name: C-C motif chemokine 23
RGD ID: 18730515
Description: ENCODES a protein that exhibits CCR1 chemokine receptor binding (ortholog); chemokine activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); malignant mesothelioma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: C-C motif chemokine ligand 23; CCL23
RGD Orthologs
Human
Mouse
Bonobo
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11629,488,060 - 29,493,808 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666075481,906 - 486,927 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
LOC103242761
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11629,488,060 - 29,493,808 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666075481,906 - 486,927 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CCL23
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381736,013,058 - 36,017,972 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1736,013,056 - 36,017,972 (-)EnsemblGRCh38hg38GRCh38
GRCh371734,340,098 - 34,345,009 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361731,364,210 - 31,369,118 (-)NCBINCBI36Build 36hg18NCBI36
Build 341731,364,209 - 31,369,118NCBI
Celera1731,249,651 - 31,254,560 (-)NCBICelera
Cytogenetic Map17q12NCBI
HuRef1730,524,964 - 30,529,874 (-)NCBIHuRef
CHM1_11734,404,627 - 34,409,539 (-)NCBICHM1_1
T2T-CHM13v2.01736,960,963 - 36,965,877 (-)NCBIT2T-CHM13v2.0
Ccl6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391183,478,712 - 83,483,913 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1183,478,708 - 83,483,913 (-)EnsemblGRCm39 Ensembl
GRCm381183,587,886 - 83,593,087 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1183,587,882 - 83,593,087 (-)EnsemblGRCm38mm10GRCm38
MGSCv371183,401,388 - 83,406,589 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361183,404,087 - 83,409,185 (-)NCBIMGSCv36mm8
Celera1193,192,253 - 93,197,479 (-)NCBICelera
Cytogenetic Map11CNCBI
cM Map1150.85NCBI
CCL23
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21928,459,908 - 28,464,833 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11730,338,865 - 30,343,790 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01720,778,008 - 20,782,929 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11721,073,882 - 21,078,794 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1721,073,882 - 21,078,794 (+)Ensemblpanpan1.1panPan2
LOC100516039
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11239,591,521 - 39,595,639 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21241,160,997 - 41,165,134 (+)NCBISscrofa10.2Sscrofa10.2susScr3


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_008011102   ⟹   XP_008009293
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11629,488,060 - 29,493,808 (-)NCBI
Vero_WHO_p1.0NW_023666075481,906 - 486,927 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008009293 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_008009293   ⟸   XM_008011102


Additional Information

Database Acc Id Source(s)
NCBI Gene CCL23 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 LOC103242761  C-C motif chemokine 23  CCL23  C-C motif chemokine ligand 23  Symbol and/or name change 5135510 APPROVED