NDUFA11 (NADH:ubiquinone oxidoreductase subunit A11) - Rat Genome Database

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Gene: NDUFA11 (NADH:ubiquinone oxidoreductase subunit A11) Chlorocebus sabaeus
Analyze
Symbol: NDUFA11
Name: NADH:ubiquinone oxidoreductase subunit A11
RGD ID: 18656893
Description: INVOLVED IN mitochondrial respiratory chain complex I assembly (inferred); ASSOCIATED WITH communication disorder (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.165,517,871 - 5,529,754 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl65,517,797 - 5,529,455 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660812,507,925 - 2,515,866 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
NDUFA11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.165,517,871 - 5,529,754 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl65,517,797 - 5,529,455 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660812,507,925 - 2,515,866 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
NDUFA11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38195,891,229 - 5,903,790 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl195,891,207 - 5,904,006 (-)EnsemblGRCh38hg38GRCh38
GRCh37195,891,240 - 5,903,801 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36195,845,686 - 5,855,025 (-)NCBINCBI36Build 36hg18NCBI36
Build 34195,845,685 - 5,855,025NCBI
Celera195,830,248 - 5,842,986 (-)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef195,650,763 - 5,663,502 (-)NCBIHuRef
CHM1_1195,891,532 - 5,904,277 (-)NCBICHM1_1
T2T-CHM13v2.0195,878,657 - 5,891,220 (-)NCBIT2T-CHM13v2.0
Ndufa11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391757,024,762 - 57,031,248 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1757,024,767 - 57,029,141 (+)EnsemblGRCm39 Ensembl
GRCm381756,717,762 - 56,724,248 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1756,717,767 - 56,722,141 (+)EnsemblGRCm38mm10GRCm38
MGSCv371756,857,185 - 56,863,671 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361756,402,886 - 56,407,816 (+)NCBIMGSCv36mm8
Celera1761,061,897 - 61,068,383 (+)NCBICelera
Cytogenetic Map17DNCBI
cM Map1729.47NCBI
Ndufa11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr891,637,614 - 1,641,673 (+)NCBIGRCr8
mRatBN7.291,550,487 - 1,554,546 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl91,550,468 - 1,555,601 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx91,984,630 - 1,988,692 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.097,333,716 - 7,337,779 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.096,289,827 - 6,293,889 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0910,334,104 - 10,338,163 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,334,090 - 10,338,216 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,331,184 - 9,335,243 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera96,962,202 - 6,966,261 (-)NCBICelera
Cytogenetic Map9q11NCBI
Ndufa11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554953,557,016 - 3,564,999 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554953,557,016 - 3,564,999 (+)NCBIChiLan1.0ChiLan1.0
NDUFA11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22010,295,409 - 10,304,660 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1199,521,617 - 9,530,800 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0194,912,557 - 4,925,203 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1195,843,085 - 5,854,846 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl195,843,085 - 5,854,797 (-)Ensemblpanpan1.1panPan2
NDUFA11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12054,183,584 - 54,189,435 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2053,927,083 - 53,932,783 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02054,834,771 - 54,840,499 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2054,834,781 - 54,840,496 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12053,901,171 - 53,906,885 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02054,350,035 - 54,355,744 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02054,580,210 - 54,585,910 (+)NCBIUU_Cfam_GSD_1.0
Ndufa11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118214,444,923 - 214,451,109 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365883,383,509 - 3,390,087 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365883,383,674 - 3,389,862 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFA11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl273,130,403 - 73,137,916 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1273,131,029 - 73,137,921 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2273,675,744 - 73,682,635 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Ndufa11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248284,319,665 - 4,328,273 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248284,319,657 - 4,328,273 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007994958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000007890   ⟹   ENSCSAP00000006051
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl65,517,797 - 5,529,455 (-)Ensembl
RefSeq Acc Id: XM_007994958   ⟹   XP_007993149
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.165,517,871 - 5,529,754 (-)NCBI
Vero_WHO_p1.0NW_0236660812,507,925 - 2,515,866 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007993149 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000006051
  ENSCSAP00000006051.1
RefSeq Acc Id: XP_007993149   ⟸   XM_007994958
- UniProtKB: A0A0D9RBR2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000006051   ⟸   ENSCSAT00000007890


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000009802 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000007890.1 UniProtKB/TrEMBL
InterPro NDUFA11 UniProtKB/TrEMBL
KEGG Report csab:103233757 UniProtKB/TrEMBL
NCBI Gene NDUFA11 ENTREZGENE
PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 11 UniProtKB/TrEMBL
  PTHR21382 UniProtKB/TrEMBL
UniProt A0A0D9RBR2 ENTREZGENE, UniProtKB/TrEMBL