Symbol: |
CUNH17orf58 (Ensembl: C17orf58) |
Name: |
chromosome unknown C17orf58 homolog (Ensembl:chromosome 16 open reading frame, human C17orf58) |
RGD ID: |
18613269 |
Description: |
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Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
C16H17orf58; chromosome 16 open reading frame, human C17orf58; UPF0450 protein C17orf58 homolog |
RGD Orthologs |
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Alliance Genes |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
ChlSab1.1 - Green Monkey 1.1 Assembly |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 16 | 53,470,937 - 53,473,347 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 16 | 53,471,010 - 53,474,674 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666077 | 24,411,899 - 24,417,258 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
Comparative Map Data
CUNH17orf58 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 16 | 53,470,937 - 53,473,347 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 16 | 53,471,010 - 53,474,674 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666077 | 24,411,899 - 24,417,258 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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C17orf58 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 17 | 67,991,099 - 67,996,469 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 17 | 67,991,099 - 67,996,469 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 17 | 65,987,215 - 65,992,585 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 17 | 63,417,679 - 63,420,227 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 17 | 62,556,881 - 62,557,883 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | q24.2 | NCBI | | | | | HuRef | 17 | 61,371,781 - 61,374,323 (-) | NCBI | | HuRef | | | CHM1_1 | 17 | 66,051,132 - 66,053,549 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 17 | 68,866,315 - 68,871,697 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
1810010H24Rik (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 106,913,499 - 106,921,269 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 106,916,507 - 106,921,269 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 107,023,269 - 107,030,443 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 107,025,681 - 107,030,443 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 106,889,537 - 106,891,757 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 106,841,984 - 106,846,537 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 118,761,694 - 118,763,914 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | E1 | NCBI | | | | | cM Map | 11 | 70.1 | NCBI | | | | |
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C10h17orf58 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 10 | 92,472,779 - 92,477,330 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 91,972,938 - 91,977,606 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 91,972,410 - 91,977,602 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 97,031,045 - 97,035,552 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 96,494,214 - 96,498,721 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 91,895,508 - 91,900,015 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 95,240,314 - 95,245,146 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 95,242,986 - 95,245,139 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 94,980,600 - 94,985,413 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 96,383,794 - 96,385,947 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 10 | 90,640,991 - 90,643,144 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q32.1 | NCBI | | | | |
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LOC102019628 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955432 | 9,347,128 - 9,347,594 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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C19H17orf58 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 19 | 84,014,944 - 84,020,300 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 17 | 88,836,085 - 88,841,430 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 17 | 61,923,775 - 61,929,098 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 17 | 67,118,249 - 67,120,596 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 17 | 67,118,249 - 67,120,596 (-) | Ensembl | panpan1.1 | | panPan2 | |
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C9H17orf58 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 9 | 12,581,017 - 12,585,900 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 12,584,103 - 12,586,303 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 13,476,462 - 13,482,207 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 14,239,332 - 14,245,089 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 14,239,361 - 14,244,759 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 13,188,492 - 13,194,232 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 14,340,106 - 14,345,832 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 14,339,089 - 14,344,844 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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CUNH17orf58 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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C12H17orf58 (Sus scrofa - pig) |
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CUNH17orf58 (Heterocephalus glaber - naked mole-rat) |
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Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM
Below Cutoff: < 0.5 TPM
|
endocrine system |
hemolymphoid system |
nervous system |
High |
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|
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Medium |
|
1
|
7
|
Low |
36
|
18
|
53
|
Below cutoff |
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1
|
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Sequence
RefSeq Acc Id: |
ENSCSAT00000002223 ⟹ ENSCSAP00000000552 |
Type: |
CODING |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source |
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ChlSab1.1 Ensembl | 16 | 53,471,010 - 53,474,674 (+) | Ensembl |
|
RefSeq Acc Id: |
XM_037993330 ⟹ XP_037849258 |
Type: |
CODING |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source |
---|
Vero_WHO_p1.0 | NW_023666077 | 24,411,899 - 24,417,258 (+) | NCBI |
|
RefSeq Acc Id: |
ENSCSAP00000000552 ⟸ ENSCSAT00000002223 |
RefSeq Acc Id: |
XP_037849258 ⟸ XM_037993330 |
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2020-12-08 |
CUNH17orf58 |
chromosome unknown C17orf58 homolog |
C16H17orf58 |
chromosome 16 open reading frame, human C17orf58 |
Symbol and/or name change |
5135510 |
APPROVED |
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