RAB14 (RAB14, member RAS oncogene family) - Rat Genome Database

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Gene: RAB14 (RAB14, member RAS oncogene family) Chlorocebus sabaeus
Analyze
Symbol: RAB14
Name: RAB14, member RAS oncogene family
RGD ID: 18611311
Description: ENCODES a protein that exhibits GDP binding (inferred); GTP binding (inferred); GTPase activity (inferred); INVOLVED IN apical protein localization (ortholog); body fluid secretion (ortholog); regulation of protein localization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; FOUND IN alveolar lamellar body (ortholog); apical plasma membrane (ortholog); cilium (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ras-related protein Rab-14
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11218,382,118 - 18,406,353 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1218,390,806 - 18,403,185 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603524,612,516 - 24,635,362 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RAB14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11218,382,118 - 18,406,353 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1218,390,806 - 18,403,185 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603524,612,516 - 24,635,362 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
RAB14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389121,178,133 - 121,201,869 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9121,178,133 - 121,223,014 (-)EnsemblGRCh38hg38GRCh38
GRCh379123,940,411 - 123,964,147 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369122,980,237 - 123,003,913 (-)NCBINCBI36Build 36hg18NCBI36
Build 349121,019,968 - 121,043,640NCBI
Celera994,588,887 - 94,612,841 (-)NCBICelera
Cytogenetic Map9q33.2NCBI
HuRef993,558,160 - 93,582,112 (-)NCBIHuRef
CHM1_19124,087,307 - 124,111,257 (-)NCBICHM1_1
T2T-CHM13v2.09133,374,160 - 133,397,896 (-)NCBIT2T-CHM13v2.0
Rab14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39235,070,217 - 35,091,132 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl235,070,217 - 35,091,132 (-)EnsemblGRCm39 Ensembl
GRCm38235,180,205 - 35,201,120 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl235,180,205 - 35,201,120 (-)EnsemblGRCm38mm10GRCm38
MGSCv37235,035,725 - 35,056,640 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36235,002,214 - 35,023,129 (-)NCBIMGSCv36mm8
Celera234,874,701 - 34,895,616 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map223.42NCBI
Rab14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8338,899,430 - 38,920,572 (-)NCBIGRCr8
mRatBN7.2318,501,953 - 18,523,253 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl318,501,963 - 18,523,172 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx321,579,078 - 21,589,494 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0330,164,112 - 30,174,528 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0328,417,981 - 28,428,397 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0314,373,270 - 14,395,357 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl314,373,275 - 14,395,362 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0319,691,787 - 19,714,201 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4314,245,693 - 14,255,984 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1314,142,071 - 14,152,356 (-)NCBI
Celera313,223,275 - 13,233,556 (-)NCBICelera
Cytogenetic Map3p11NCBI
Rab14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554196,790,707 - 6,812,870 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554196,790,110 - 6,812,870 (+)NCBIChiLan1.0ChiLan1.0
RAB14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21118,142,797 - 18,165,584 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1918,145,477 - 18,167,934 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0992,305,656 - 92,329,419 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19120,652,075 - 120,674,784 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9120,654,180 - 120,666,170 (-)Ensemblpanpan1.1panPan2
RAB14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11174,157,497 - 74,172,817 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1174,159,414 - 74,172,810 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1172,568,670 - 72,591,083 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01175,294,806 - 75,317,181 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11173,802,537 - 73,824,977 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01173,832,913 - 73,855,283 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01174,572,713 - 74,595,040 (-)NCBIUU_Cfam_GSD_1.0
Rab14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947189,907,256 - 189,922,208 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364879,673,487 - 9,690,654 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364879,675,517 - 9,699,469 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAB14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1261,229,535 - 261,256,791 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11261,228,112 - 261,256,913 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21293,477,523 - 293,506,262 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Rab14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476014,069,387 - 14,096,684 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476014,069,403 - 14,096,684 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007968211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000011385   ⟹   ENSCSAP00000009455
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1218,390,806 - 18,403,185 (+)Ensembl
RefSeq Acc Id: XM_007968211   ⟹   XP_007966402
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11218,382,118 - 18,406,353 (+)NCBI
Vero_WHO_p1.0NW_02366603524,612,516 - 24,635,362 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007966402 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000009455
  ENSCSAP00000009455.1
RefSeq Acc Id: XP_007966402   ⟸   XM_007968211
- UniProtKB: A0A0D9RLG6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000009455   ⟸   ENSCSAT00000011385


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000013289 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000011385.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  Rab14 UniProtKB/TrEMBL
  Rab_GTPases_membrane_traffic UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  Small_GTPase UniProtKB/TrEMBL
KEGG Report csab:103218911 UniProtKB/TrEMBL
NCBI Gene RAB14 ENTREZGENE
PANTHER DRAB11-RELATED UniProtKB/TrEMBL
  RAS-RELATED PROTEIN RAB-14 UniProtKB/TrEMBL
Pfam Ras UniProtKB/TrEMBL
PRINTS RASTRNSFRMNG UniProtKB/TrEMBL
PROSITE RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
SMART RAB UniProtKB/TrEMBL
  RAN UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A0D9RLG6 ENTREZGENE, UniProtKB/TrEMBL