FGGY (FGGY carbohydrate kinase domain containing) - Rat Genome Database

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Gene: FGGY (FGGY carbohydrate kinase domain containing) Chlorocebus sabaeus
Analyze
Symbol: FGGY
Name: FGGY carbohydrate kinase domain containing
RGD ID: 18606476
Description: ENCODES a protein that exhibits D-ribulokinase activity (inferred); kinase activity (inferred); phosphotransferase activity, alcohol group as acceptor (inferred); INVOLVED IN carbohydrate metabolic process (inferred); carbohydrate phosphorylation (inferred); neuron cellular homeostasis (inferred); ASSOCIATED WITH intellectual disability (ortholog); obesity (ortholog); Weight Gain (ortholog); FOUND IN cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: FGGY carbohydrate kinase domain-containing protein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12073,249,685 - 73,690,591 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2073,249,684 - 73,670,860 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603343,692,740 - 44,137,087 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
FGGY
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12073,249,685 - 73,690,591 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2073,249,684 - 73,670,860 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603343,692,740 - 44,137,087 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
FGGY
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38159,296,378 - 59,762,730 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl159,296,638 - 59,810,647 (+)EnsemblGRCh38hg38GRCh38
GRCh37159,762,485 - 60,228,402 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36159,535,328 - 60,000,987 (+)NCBINCBI36Build 36hg18NCBI36
Celera158,050,760 - 58,517,212 (+)NCBICelera
Cytogenetic Map1p32.1NCBI
HuRef157,873,726 - 58,339,725 (+)NCBIHuRef
CHM1_1159,878,088 - 60,343,919 (+)NCBICHM1_1
T2T-CHM13v2.0159,174,750 - 59,641,176 (+)NCBIT2T-CHM13v2.0
Fggy
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39495,445,717 - 95,815,176 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl495,445,744 - 95,815,176 (+)EnsemblGRCm39 Ensembl
GRCm38495,557,480 - 95,926,939 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl495,557,507 - 95,926,939 (+)EnsemblGRCm38mm10GRCm38
MGSCv37495,224,198 - 95,593,630 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36495,071,521 - 95,313,587 (+)NCBIMGSCv36mm8
Celera493,937,345 - 94,306,693 (+)NCBICelera
Cytogenetic Map4C5NCBI
cM Map443.83NCBI
Fggy
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85115,514,573 - 115,901,713 (+)NCBIGRCr8
mRatBN7.25110,398,866 - 110,786,019 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5110,398,863 - 110,786,017 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5112,964,291 - 113,359,443 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05114,689,808 - 115,084,963 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05114,752,336 - 115,147,501 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05114,516,860 - 114,901,571 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5114,516,889 - 114,901,564 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05118,461,629 - 118,848,796 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45115,881,466 - 116,286,358 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15115,916,199 - 116,291,581 (+)NCBI
Celera5109,010,541 - 109,391,555 (+)NCBICelera
Cytogenetic Map5q33NCBI
Fggy
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955464188,188 - 683,209 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955464188,037 - 683,230 (-)NCBIChiLan1.0ChiLan1.0
FGGY
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21167,089,858 - 167,549,309 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11166,240,926 - 166,701,547 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0158,561,066 - 59,020,520 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1160,265,564 - 60,725,528 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl160,265,564 - 60,725,528 (+)Ensemblpanpan1.1panPan2
FGGY
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1550,109,660 - 50,523,896 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl550,109,660 - 50,522,630 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha550,176,033 - 50,589,869 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0550,289,699 - 50,704,307 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl550,289,701 - 50,704,337 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1550,240,536 - 50,654,464 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0550,185,976 - 50,599,822 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0550,468,743 - 50,883,534 (-)NCBIUU_Cfam_GSD_1.0
Fggy
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505872,826,955 - 73,220,184 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365222,196,015 - 2,589,296 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365222,196,664 - 2,589,311 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGGY
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6152,754,924 - 153,213,127 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16152,754,923 - 153,213,179 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26140,364,062 - 140,400,807 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Fggy
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624862657,061 - 1,082,129 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624862657,572 - 1,098,265 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FGGY
9482 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007978539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007978552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038000590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038000601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038000607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038000610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038000614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038000619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038000621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038000627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000017205   ⟹   ENSCSAP00000016689
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl2073,249,684 - 73,670,860 (-)Ensembl
RefSeq Acc Id: XM_007978539   ⟹   XP_007976730
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12073,249,685 - 73,669,866 (-)NCBI
Vero_WHO_p1.0NW_02366603343,714,911 - 44,137,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007978541   ⟹   XP_007976732
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12073,249,685 - 73,690,426 (-)NCBI
Vero_WHO_p1.0NW_02366603343,692,945 - 44,137,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007978542   ⟹   XP_007976733
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12073,249,685 - 73,690,591 (-)NCBI
Vero_WHO_p1.0NW_02366603343,692,740 - 44,137,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007978546   ⟹   XP_007976737
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12073,249,685 - 73,690,426 (-)NCBI
Vero_WHO_p1.0NW_02366603343,692,945 - 44,137,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007978550   ⟹   XP_007976741
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12073,249,685 - 73,566,014 (-)NCBI
Vero_WHO_p1.0NW_02366603343,821,728 - 44,137,087 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038000590   ⟹   XP_037856518
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603343,712,119 - 44,137,087 (+)NCBI
RefSeq Acc Id: XM_038000601   ⟹   XP_037856529
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603343,692,937 - 44,096,541 (+)NCBI
RefSeq Acc Id: XM_038000607   ⟹   XP_037856535
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603343,692,938 - 44,055,571 (+)NCBI
RefSeq Acc Id: XM_038000610   ⟹   XP_037856538
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603343,692,941 - 44,137,087 (+)NCBI
RefSeq Acc Id: XM_038000614   ⟹   XP_037856542
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603343,756,110 - 44,137,087 (+)NCBI
RefSeq Acc Id: XM_038000619   ⟹   XP_037856547
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603343,805,452 - 44,137,087 (+)NCBI
RefSeq Acc Id: XM_038000621   ⟹   XP_037856549
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603343,874,670 - 44,137,087 (+)NCBI
RefSeq Acc Id: XM_038000627   ⟹   XP_037856555
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603343,743,554 - 44,137,087 (+)NCBI
RefSeq Acc Id: XP_007976733   ⟸   XM_007978542
- Peptide Label: isoform X1
- UniProtKB: A0A0D9S750 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007976732   ⟸   XM_007978541
- Peptide Label: isoform X1
- UniProtKB: A0A0D9S750 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007976737   ⟸   XM_007978546
- Peptide Label: isoform X1
- UniProtKB: A0A0D9S750 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007976730   ⟸   XM_007978539
- Peptide Label: isoform X1
- UniProtKB: A0A0D9S750 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007976741   ⟸   XM_007978550
- Peptide Label: isoform X5
Ensembl Acc Id: ENSCSAP00000016689   ⟸   ENSCSAT00000017205
RefSeq Acc Id: XP_037856529   ⟸   XM_038000601
- Peptide Label: isoform X2
RefSeq Acc Id: XP_037856535   ⟸   XM_038000607
- Peptide Label: isoform X3
RefSeq Acc Id: XP_037856538   ⟸   XM_038000610
- Peptide Label: isoform X4
RefSeq Acc Id: XP_037856518   ⟸   XM_038000590
- Peptide Label: isoform X1
- UniProtKB: A0A0D9S750 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037856555   ⟸   XM_038000627
- Peptide Label: isoform X8
RefSeq Acc Id: XP_037856542   ⟸   XM_038000614
- Peptide Label: isoform X6
RefSeq Acc Id: XP_037856547   ⟸   XM_038000619
- Peptide Label: isoform X6
RefSeq Acc Id: XP_037856549   ⟸   XM_038000621
- Peptide Label: isoform X7


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000001328 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000017205.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.2240 UniProtKB/TrEMBL
  3.30.420.40 UniProtKB/TrEMBL
InterPro ATPase_NBD UniProtKB/TrEMBL
  Carb_kinase_FGGY UniProtKB/TrEMBL
  Carb_kinase_FGGY_C UniProtKB/TrEMBL
  Carb_kinase_FGGY_N UniProtKB/TrEMBL
  FGGY_RbtK-like UniProtKB/TrEMBL
NCBI Gene FGGY ENTREZGENE
PANTHER FGGY CARBOHYDRATE KINASE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  RIBULOKINASE UniProtKB/TrEMBL
Pfam FGGY_C UniProtKB/TrEMBL
  FGGY_N UniProtKB/TrEMBL
PIRSF GlpK UniProtKB/TrEMBL
Superfamily-SCOP SSF53067 UniProtKB/TrEMBL
UniProt A0A0D9S750 ENTREZGENE, UniProtKB/TrEMBL