Fggy (FGGY carbohydrate kinase domain containing) - Rat Genome Database

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Gene: Fggy (FGGY carbohydrate kinase domain containing) Heterocephalus glaber
Analyze
Symbol: Fggy
Name: FGGY carbohydrate kinase domain containing
RGD ID: 18933550
Description: ENCODES a protein that exhibits D-ribulokinase activity (inferred); kinase activity (inferred); phosphotransferase activity, alcohol group as acceptor (inferred); INVOLVED IN neuron cellular homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); obesity (ortholog); FOUND IN cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: FGGY carbohydrate kinase domain-containing protein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624862657,061 - 1,082,129 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624862657,572 - 1,098,265 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Fggy
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624862657,061 - 1,082,129 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624862657,572 - 1,098,265 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
FGGY
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38159,296,378 - 59,762,730 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl159,296,638 - 59,810,647 (+)EnsemblGRCh38hg38GRCh38
GRCh37159,762,485 - 60,228,402 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36159,535,328 - 60,000,987 (+)NCBINCBI36Build 36hg18NCBI36
Celera158,050,760 - 58,517,212 (+)NCBICelera
Cytogenetic Map1p32.1NCBI
HuRef157,873,726 - 58,339,725 (+)NCBIHuRef
CHM1_1159,878,088 - 60,343,919 (+)NCBICHM1_1
T2T-CHM13v2.0159,174,750 - 59,641,176 (+)NCBIT2T-CHM13v2.0
Fggy
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39495,445,717 - 95,815,176 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl495,445,744 - 95,815,176 (+)EnsemblGRCm39 Ensembl
GRCm38495,557,480 - 95,926,939 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl495,557,507 - 95,926,939 (+)EnsemblGRCm38mm10GRCm38
MGSCv37495,224,198 - 95,593,630 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36495,071,521 - 95,313,587 (+)NCBIMGSCv36mm8
Celera493,937,345 - 94,306,693 (+)NCBICelera
Cytogenetic Map4C5NCBI
cM Map443.83NCBI
Fggy
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85115,514,573 - 115,901,713 (+)NCBIGRCr8
mRatBN7.25110,398,866 - 110,786,019 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5110,398,863 - 110,786,017 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5112,964,291 - 113,359,443 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05114,689,808 - 115,084,963 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05114,752,336 - 115,147,501 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05114,516,860 - 114,901,571 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5114,516,889 - 114,901,564 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05118,461,629 - 118,848,796 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45115,881,466 - 116,286,358 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15115,916,199 - 116,291,581 (+)NCBI
Celera5109,010,541 - 109,391,555 (+)NCBICelera
Cytogenetic Map5q33NCBI
Fggy
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955464188,188 - 683,209 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955464188,037 - 683,230 (-)NCBIChiLan1.0ChiLan1.0
FGGY
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21167,089,858 - 167,549,309 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11166,240,926 - 166,701,547 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0158,561,066 - 59,020,520 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1160,265,564 - 60,725,528 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl160,265,564 - 60,725,528 (+)Ensemblpanpan1.1panPan2
FGGY
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1550,109,660 - 50,523,896 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl550,109,660 - 50,522,630 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha550,176,033 - 50,589,869 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0550,289,699 - 50,704,307 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl550,289,701 - 50,704,337 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1550,240,536 - 50,654,464 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0550,185,976 - 50,599,822 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0550,468,743 - 50,883,534 (-)NCBIUU_Cfam_GSD_1.0
Fggy
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505872,826,955 - 73,220,184 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365222,196,015 - 2,589,296 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365222,196,664 - 2,589,311 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGGY
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6152,754,924 - 153,213,127 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16152,754,923 - 153,213,179 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26140,364,062 - 140,400,807 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FGGY
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12073,249,685 - 73,690,591 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2073,249,684 - 73,670,860 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603343,692,740 - 44,137,087 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004869604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004869605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_004869606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021248220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021248222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021248223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021248224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021248225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01093378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01093379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01093380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01093381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01093382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01093383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01093384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01093385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01093386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01093387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01093388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000011519   ⟹   ENSHGLP00000011392
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624862657,061 - 1,082,129 (-)Ensembl
RefSeq Acc Id: ENSHGLT00000011520   ⟹   ENSHGLP00000011393
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624862657,713 - 1,057,001 (-)Ensembl
RefSeq Acc Id: ENSHGLT00000011521   ⟹   ENSHGLP00000011394
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624862775,034 - 1,057,001 (-)Ensembl
RefSeq Acc Id: XM_004869604   ⟹   XP_004869661
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624862657,572 - 1,081,480 (-)NCBI
RefSeq Acc Id: XM_004869605   ⟹   XP_004869662
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624862657,572 - 1,081,463 (-)NCBI
RefSeq Acc Id: XM_004869606   ⟹   XP_004869663
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624862657,572 - 1,098,265 (-)NCBI
RefSeq Acc Id: XM_021248220   ⟹   XP_021103879
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624862657,572 - 1,081,480 (-)NCBI
RefSeq Acc Id: XM_021248222   ⟹   XP_021103881
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624862657,572 - 1,098,240 (-)NCBI
RefSeq Acc Id: XM_021248223   ⟹   XP_021103882
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624862657,572 - 1,025,179 (-)NCBI
RefSeq Acc Id: XM_021248224   ⟹   XP_021103883
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624862657,572 - 1,025,589 (-)NCBI
RefSeq Acc Id: XM_021248225   ⟹   XP_021103884
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624862657,572 - 876,752 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_004869663   ⟸   XM_004869606
- Peptide Label: isoform X1
- UniProtKB: G5APN7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021103881   ⟸   XM_021248222
- Peptide Label: isoform X3
RefSeq Acc Id: XP_021103879   ⟸   XM_021248220
- Peptide Label: isoform X2
- UniProtKB: G5APN7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004869661   ⟸   XM_004869604
- Peptide Label: isoform X1
- UniProtKB: G5APN7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004869662   ⟸   XM_004869605
- Peptide Label: isoform X1
- UniProtKB: G5APN7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021103883   ⟸   XM_021248224
- Peptide Label: isoform X4
RefSeq Acc Id: XP_021103882   ⟸   XM_021248223
- Peptide Label: isoform X4
RefSeq Acc Id: XP_021103884   ⟸   XM_021248225
- Peptide Label: isoform X5
RefSeq Acc Id: ENSHGLP00000011394   ⟸   ENSHGLT00000011521
RefSeq Acc Id: ENSHGLP00000011393   ⟸   ENSHGLT00000011520
RefSeq Acc Id: ENSHGLP00000011392   ⟸   ENSHGLT00000011519


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000008168 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000011519 ENTREZGENE
  ENSHGLT00000011520 ENTREZGENE
Gene3D-CATH 3.30.420.40 UniProtKB/TrEMBL
InterPro ATPase_NBD UniProtKB/TrEMBL
  Carb_kinase_FGGY UniProtKB/TrEMBL
  Carb_kinase_FGGY_C UniProtKB/TrEMBL
  Carb_kinase_FGGY_N UniProtKB/TrEMBL
  FGGY_RbtK-like UniProtKB/TrEMBL
NCBI Gene Fggy ENTREZGENE
PANTHER FGGY CARBOHYDRATE KINASE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  RIBULOKINASE UniProtKB/TrEMBL
Pfam FGGY_C UniProtKB/TrEMBL
  FGGY_N UniProtKB/TrEMBL
PIRSF GlpK UniProtKB/TrEMBL
Superfamily-SCOP Actin-like ATPase domain UniProtKB/TrEMBL
UniProt G5APN7 ENTREZGENE, UniProtKB/TrEMBL