Symbol:
COPS6
Name:
COP9 signalosome subunit 6
RGD ID:
18556214
Description:
ENCODES a protein that exhibits metallopeptidase activity (inferred); peptidase activity (inferred); INVOLVED IN protein deneddylation (inferred); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); pleomorphic xanthoastrocytoma (ortholog); prostate cancer (ortholog); FOUND IN COP9 signalosome (inferred); cytoplasm (inferred); nucleoplasm (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
COP9 signalosome complex subunit 6
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 28 12,986,194 - 12,989,189 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 28 12,986,346 - 12,989,174 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666070 3,283,730 - 3,286,718 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
COPS6 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 28 12,986,194 - 12,989,189 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 28 12,986,346 - 12,989,174 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666070 3,283,730 - 3,286,718 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
COPS6 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 100,088,969 - 100,092,187 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 100,088,969 - 100,092,187 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 7 99,686,592 - 99,689,810 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 7 99,524,519 - 99,527,759 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 7 99,331,233 - 99,334,471 NCBI Celera 7 94,421,242 - 94,424,482 (+) NCBI Celera Cytogenetic Map 7 q22.1 NCBI HuRef 7 94,322,234 - 94,325,474 (+) NCBI HuRef CHM1_1 7 99,616,742 - 99,619,982 (+) NCBI CHM1_1 T2T-CHM13v2.0 7 101,328,815 - 101,332,033 (+) NCBI T2T-CHM13v2.0 CRA_TCAGchr7v2 7 99,046,703 - 99,049,943 (+) NCBI
Cops6 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 138,159,364 - 138,162,246 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 138,159,333 - 138,162,908 (+) Ensembl GRCm39 Ensembl GRCm38 5 138,161,102 - 138,163,984 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 138,161,071 - 138,164,646 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 138,602,330 - 138,605,212 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 138,390,890 - 138,393,772 (+) NCBI MGSCv36 mm8 Celera 5 135,140,434 - 135,143,316 (+) NCBI Celera Cytogenetic Map 5 G2 NCBI cM Map 5 76.97 NCBI
Cops6 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 22,152,688 - 22,155,527 (+) NCBI GRCr8 mRatBN7.2 12 17,038,979 - 17,041,818 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 17,038,979 - 17,046,371 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 12 17,862,350 - 17,865,183 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 12 18,486,094 - 18,488,927 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 12 17,539,500 - 17,542,333 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 12 19,303,387 - 19,306,226 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 19,303,387 - 19,306,226 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 12 21,361,017 - 21,363,856 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 12 17,604,017 - 17,606,856 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 12 17,587,845 - 17,596,347 (+) NCBI Celera 12 18,969,149 - 18,971,988 (+) NCBI Celera Cytogenetic Map 12 q11 NCBI
Cops6 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955573 770,271 - 775,489 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955573 770,271 - 775,222 (-) NCBI ChiLan1.0 ChiLan1.0
COPS6 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 6 118,008,389 - 118,011,377 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 7 166,273,021 - 166,276,006 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 7 92,124,166 - 92,127,165 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 7 105,557,778 - 105,560,998 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 7 105,557,778 - 105,560,998 (+) Ensembl panpan1.1 panPan2
COPS6 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 9,500,715 - 9,503,481 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 9,500,724 - 9,503,328 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 ROS_Cfam_1.0 6 9,437,718 - 9,440,669 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 6 9,437,717 - 9,440,346 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 6 9,287,044 - 9,289,721 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 9,267,344 - 9,270,300 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 9,446,955 - 9,449,633 (-) NCBI UU_Cfam_GSD_1.0
Cops6
COPS6
Cops6
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCSAT00000015929 ⟹ ENSCSAP00000013856
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 Ensembl 28 12,986,346 - 12,989,174 (-) Ensembl
RefSeq Acc Id:
XM_008018593 ⟹ XP_008016784
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 28 12,986,194 - 12,989,189 (-) NCBI Vero_WHO_p1.0 NW_023666070 3,283,730 - 3,286,718 (+) NCBI
Sequence:
GAAGGAAGGGGGCGGGGCCGAGGCTGGCGGGCGCGGGGAAAATGGCGGCGGCGGCGGCTGCAGCTACAAACGGGACCGGAGGGAGCAGCGGGATGGAGGTGGATGCAGCAGTAGTTCCCAGCGTGATG
hide sequence
RefSeq Acc Id:
XP_008016784 ⟸ XM_008018593
- UniProtKB:
A0A0D9RZ17 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSCSAP00000013856 ⟸ ENSCSAT00000015929
