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Gene: PRPF40A (pre-mRNA processing factor 40 homolog A) Chlorocebus sabaeus

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Symbol:

PRPF40A

Name:

pre-mRNA processing factor 40 homolog A

RGD ID:

18548612

Description:

ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN cell migration (ortholog); cytoskeleton organization (ortholog); regulation of cell shape (ortholog); FOUND IN nuclear matrix (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

pre-mRNA-processing factor 40 homolog A

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	38,086,971 - 38,151,726 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	38,088,281 - 38,151,371 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	161,416,070 - 161,480,948 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell migration (ISO)

cytoskeleton organization (ISO)

mRNA cis splicing, via spliceosome (IEA)

mRNA splicing, via spliceosome (IEA)

regulation of cell shape (ISO)

regulation of cytokinesis (ISO)

Cellular Component

nuclear matrix (ISO)

nuclear speck (IEA)

nucleus (IEA)

U1 snRNP (IEA)

U2-type prespliceosome (IEA)

Molecular Function

proline-rich region binding (ISO)

protein binding (ISO)

RNA binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PRPF40A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	38,086,971 - 38,151,726 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	38,088,281 - 38,151,371 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	161,416,070 - 161,480,948 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

PRPF40A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	152,651,732 - 152,718,019 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	152,651,593 - 152,718,012 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	153,508,246 - 153,574,533 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	153,216,353 - 153,282,221 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	147,122,555 - 147,188,431 (-)	NCBI		Celera
Cytogenetic Map	2	q23.3	NCBI
HuRef	2	145,394,474 - 145,460,345 (-)	NCBI		HuRef
CHM1_1	2	153,514,130 - 153,580,008 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	153,104,294 - 153,170,565 (-)	NCBI		T2T-CHM13v2.0

Prpf40a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	53,024,714 - 53,081,450 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	53,024,716 - 53,081,714 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	53,134,702 - 53,191,438 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	53,134,704 - 53,191,284 (-)	Ensembl	GRCm38		mm10	GRCm38
GRCm38.p6 Ensembl	2	53,134,704 - 53,191,702 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	52,997,509 - 53,050,221 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	52,960,484 - 53,013,196 (-)	NCBI		MGSCv36	mm8
Celera	2	54,880,090 - 54,932,591 (-)	NCBI		Celera
Cytogenetic Map	2	C1.1	NCBI
cM Map	2	30.69	NCBI

Prpf40a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	58,036,779 - 58,098,996 (-)	NCBI		GRCr8
mRatBN7.2	3	37,625,585 - 37,689,859 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	37,627,690 - 37,690,886 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	41,001,890 - 41,062,025 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	49,586,708 - 49,646,842 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	47,371,550 - 47,431,684 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	38,680,583 - 38,741,570 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	38,682,146 - 38,741,113 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	43,778,141 - 43,839,268 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	34,661,461 - 34,721,438 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	34,557,496 - 34,618,041 (-)	NCBI
Celera	3	35,768,130 - 35,827,799 (-)	NCBI		Celera
Cytogenetic Map	3	q12	NCBI

Prpf40a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955440	18,083,838 - 18,128,701 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955440	18,083,838 - 18,128,701 (-)	NCBI	ChiLan1.0	ChiLan1.0

PRPF40A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	55,339,652 - 55,401,915 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	55,354,632 - 55,417,571 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	39,955,290 - 40,017,636 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	157,189,945 - 157,256,184 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	157,194,506 - 157,254,983 (-)	Ensembl	panpan1.1		panPan2

PRPF40A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	19	53,649,424 - 53,710,095 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	19	53,651,453 - 53,710,633 (-)	NCBI	CanFam3.1		canFam3	CanFam3.1
CanFam3.1 Ensembl	19	53,651,453 - 53,710,633 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	27,948,940 - 28,009,892 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	19	55,161,297 - 55,222,274 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	19	55,163,918 - 55,222,155 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	19	53,877,024 - 53,937,982 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	19	53,947,078 - 54,007,975 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	19	55,412,012 - 55,472,975 (-)	NCBI		UU_Cfam_GSD_1.0

Prpf40a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	116,596,815 - 116,654,368 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936469	24,963,905 - 25,018,961 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936469	24,963,691 - 25,019,961 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PRPF40A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	60,386,596 - 60,439,807 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	60,388,582 - 60,440,478 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	67,034,695 - 67,085,766 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Prpf40a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624866	4,369,605 - 4,430,816 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PRPF40A
929 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007964977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007964978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007964979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007964980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007964981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007964983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007964984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038002111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038002112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038002113	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038002114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038002115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038002116	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038002117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038002118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000014091 ⟹ ENSCSAP00000012071

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	10	38,088,281 - 38,151,371 (-)	Ensembl

RefSeq Acc Id:

XM_007964977 ⟹ XP_007963168

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	38,086,971 - 38,151,621 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	161,416,177 - 161,480,948 (+)	NCBI

Sequence:

show sequence

CGCTAACACTAGAGGCTGCTTACCCCCGCCCCCTCCACCCTGCCCCTGACGGCCTCAGGTTTGT
GGGGCGTACGTAACTCGGGCGGGGAGGGGGAAGGTGGCAGACCCCACTGCCCCACCCCCTACGG
GGTGAGGCGGTATAAGCTCGGGAAGCTGGGACACGGTTGTCTTCCCTTCCCCTGGGGAAGTTGG
TAGAGTTTTCCCGACGGAGGACTCGGCGCAGAAACTTCCTCCGTCCTCCCCCCGCCCCATGCAG
GCGACGCCGAGTGAGGCTGAGGCTGCGGGCGAATCGCCGCAGAGTTGCGTGTCGGCCGCGCATT
CTGATTGGACAGCGGGGAAGCCCGTCAGCCTGTTGGCCTCGCTGATCCCGCCCCGTAGCGCAGG
GCAGCCTTTAACCTTTAGCCCCAGTGGGCGCCAGCCACTCAGATCGCTTCTTGTTGGTATGTGT
AGCGGCAGTGGCCGCCGGCGGAGCAGTCTGAGCCCGACGATGAGGCCGGGGACGGGAGCTGAAC
GTGGAGGCCTCATGGTGAGTGAAATGGAGAGCCATCCTCCCTCGCAGGGTCCTGGGGACGGGGA
GCGGAGATTGTCCGGCTCAAGCCTCTGCTCCGGCTCTTGGGTCTCTGCTGACGGCTTCCTGAGG
AGACGGCCCTCGATGGGGCACCCTGGCATGCATTATGCCCCAATGGGAATGCACCCTATGGGTC
AGAGAGCGAATATGCCTCCTGTACCTCATGGAATGATGCCACAGATGATGCCCCCTATGGGAGG
GCCACCAATGGGACAAATGCCTGGAATGATGTCGTCAGTAATGCCTGGAATGATGATGTCTCAT
ATGTCTCAGGCTTCCATGCAGCCTGCCTTACCGCCAGGAGTAAATAGTATGGATGTAGCAGCAG
GTACAGCATCTGGTGCAAAATCAATGTGGACTGAACATAAATCACCTGATGGAAGGACTTATTA
CTACAACACTGAAACCAAACAATCTACCTGGGAGAAACCAGATGATCTCAAAACACCTGCTGAG
CAACTCTTATCTAAATGCCCCTGGAAGGAATACAAATCAGATTCTGGAAAGCCTTACTATTACA
ATTCTCAAACAAAAGAATCTCGCTGGGCCAAACCTAAAGAACTTGAGGATCTTGAAGGATACCA
GAATACCATTGTTGCTGGAAGTCTTATTACAAAATCAAACCTGCATGCAATGATCAAAGCTGAA
GAAAGCAGTAAGCAAGAAGAATGCACCACAACATCAACAGCCCCAGTCCCTACAACAGAAATTC
CGACCACAATGAGCACCATGGCTGCTGCAGAAGCAGCAGCTGCTGTTGTTGCAGCTGCAGCAGC
AGCAGCAGCTGCAGCAGCTGCAGCCAATGCTAATGCTTCCACTTCTACTTCTAATACTGTCAGT
GGAACTGTTCCAGTTGTTCCTGAGCCTGAAGTTACTTCCATTGTTGCTACTGTTGTAGATAATG
AGAATACAGTAACTATTTCAACTGAGGAACAAGCACAACTTACTAGTACCCCTGCTATTCAGGA
TCAAAGTGTGGAAGTATCCAGTAATACTGGAGAAGAAACATCTAAGCAAGAAACTGTAGCTGAT
TTTACTCCCAAAAAGGAAGAGGAGGAGAGCCAACCAGCAAAGAAAACATACACTTGGAATACAA
AGGAGGAGGCAAAGCAAGCTTTTAAAGAATTATTGAAAGAAAAGCGGGTACCATCAAATGCTTC
ATGGGAGCAAGCTATGAAAATGATTATTAATGATCCACGATACAGTGCTTTGGCAAAGTTAAGT
GAAAAAAAGCAAGCCTTTAATGCCTATAAAGTCCAGACAGAAAAAGAAGAAAAAGAAGAAGCAA
GATCAAAGTACAAAGAGGCTAAGGAATCCTTTCAGCGTTTTCTTGAAAATCATGAGAAAATGAC
TTCTACAACCAGATACAAAAAAGCAGAGCAAATGTTTGGAGAGATGGAAGTTTGGAATGCAATA
TCAGAACGTGATCGTCTTGAAATCTACGAAGATGTTCTGTTCTTTCTTTCAAAAAAAGAAAAGG
AACAAGCAAAGCAGTTGCGAAAGAGAAATTGGGAAGCCTTAAAAAACATACTTGACAACATGGC
TAATGTAACATACTCTACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAATCCAACTTTT
GCAGAAGATGAGGAGTTACAAAATATGGACAAAGAAGATGCATTAATTTGCTTTGAAGAACACA
TTCGGGCTTTAGAAAAGGAGGAAGAAGAAGAAAAACAGAAGAGTTTGCTAAGAGAAAGGAGACG
ACAGCGAAAAAATAGGGAATCTTTCCAGATATTTTTAGATGAATTACATGAACATGGACAACTA
CATTCTATGTCATCTTGGATGGAATTGTATCCAACTATTAGTTCTGATATTAGATTCACTAATA
TGCTTGGTCAGCCTGTTTTTTCATTAGGATCAACTGCACTTGATCTTTTCAAGTTTTATGTTGA
GGATCTTAAAGCACGTTATCATGATGAGAAGAAGATAATAAAAGACATTCTAAAGGATAAAGGG
TTTGTAGTTGAAGTAAATACCACTTTTGAAGATTTTGTGGCGATAATCAGTTCAACTAAAAGAT
CAACTACATTAGACGCTGGAAATATCAAATTGGCTTTCAATAGTTTACTAGAAAAGGCAGAAGC
CCGTGAACGCGAAAGAGAAAAAGAAGAGGCTCGGAAGATGAAACGAAAAGAGTCTGCATTTAAG
AGTATGTTAAAACAAGCTGCTCCCCCGATAGAATTGGATGCTGTCTGGGAAGATATCCGTGAGA
GATTTGTAAAAGAGCCAGCATTTGAGGACATAACTCTAGAATCTGAAAGAAAACGAATATTTAA
AGATTTTATGCATGTGCTTGAGCATGAATGTCAGCATCATCATTCAAAGAACAAGAAACATTCT
AAGAAATCTAAAAAACATCATAGGAAACGTTCCCGCTCTCGATCGGGGTCAGATTCAGATGATG
ATGATAGCCATTCAAAGAAAAAAAGACAACGATCAGAGTCTCGTTCTGCTTCAGAACATTCTTC
TAGTGCAGAGTCTGAGAGAAGTTACAAAAAGTCGAAAAAGCATAAGAAGAAAAGTAAGAAGAGG
AGACATAAATCTGACTCTCCAGAATCCGATGCTGAGCGAGAGAAGGATAAAAAAGAAAAAGATC
GGGAAAGTGAAAAAGACAGAACTAGACAAAGATCAGAATCAAAACACAAATCGCCTAAGAAAAA
GACTGGAAAGGATTCTGGTAATTGGGATACTTCTGGCAGTGAACTGAGTGAAGGGGAATTGGAA
AAGCGCAGAAGAACCCTTTTGGAGCAACTGGATGATGATCAATAAATTATACCAAATATATGTT
TACAGTATGATTTAAAGTCTGATTCAGACCAGGGACTCTATTTCAAGTTCAACTGAAGTAACAC
TGGGTTTTAATTATATCACAGGAAAAAAAAAAAGTGCATTTAAGTATTGTTATCGTGGACTTTA
TAAAAGCAAAGGAAATTGAAAATAACTTTTGATTCTGTATCAAGAATCATATTTTCATACAGTC
ATAACTGTCTTTCTGTGACCCTTTCACAGGGCACTGTAGGATGGATTAAAGGTGGCAATTTACT
GATAACTGCAGATGTCTCTACTTTGTTCTAAAATCTAAGTCATGAGGTGATTTGATTTACTTTA
TAGAAGCTGGATTTTGAAGATATAATGAAAAATTTTTTGATAATATAGTAGTACAAAAAAAGCA
CCAGCAACTGATAAAACTGCTTTTTTGTGCACTACCCAACTGGTTACAGCCAATGTGATCTTTT
ATGGTGAAACTCCTAAGAAATAGGTGGTTTTGCTGGAAACTTGGTAGACCCTTAATTATAGTGG
TGCTAATGAGCACTACTGTAATATAAAGCCACCATTATTTTTTATCAAACATCTGAATACATTT
TACAAAGGCTATTGTGAGGGCATTATTTTGAGCATCTATTTTGAGGTGATGTTTAAAAAAAACT
TTAACATCAAATTGTAAATTAATTTAAATATATTGCCTTAAGGACCTACTAAAGAATGTGCCAC
CAGACTTTAAGTGATAGTTGCAATATCCTTGTCTAAAAAAAAGAAAAAAAAACAGTTGACTTAA
ACATTTTCTTTAACAGTTGTCTTTTTTTTCTAAATTCAGTCTTTCTCTTGCTTTTTTTCCCCCG
CTATTGAGGAAGTATTTTGCCTTCCCTACTCACTGAGAAGTATTGACTTCGTGGTACACATTCT
AAAGCATTTCTGATTTGAATATTTTTGTATATTTTTATCAATTATTAAACCTTCTCTTCTAGTG
TGTACTAGTATTTATTTCTACTTAAACTGCTCAGCTCTAAAGAAATTGTATGATCATTTTAAAG
GTACTAAATCCCTGAAATTTTGCTTCATCTTACCCACACAGCTAGTTTACTTTCCTTTTTTAAT
ATTTAAGAATATTATAAATCAGTGCATTTGAGGTCCCTAGATTTGTTTTTCACCTATGAATTTT
TTACAGACTATTTTAGAGAGGCAATGGTTTGAAGACAGAATACTCTACATGCTAACTTCTGAAG
GTTGGTAATGTAATTTATACTATTTTCCTTCAGTGCAGGAGATTTTTTAAGTAAATAAGTAAAT
TTTAGCACCTA

hide sequence

RefSeq Acc Id:

XM_007964978 ⟹ XP_007963169

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	38,087,300 - 38,151,458 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	161,416,178 - 161,480,948 (+)	NCBI

Sequence:

show sequence

GTTGTCTTCCCTTCCCCTGGGGAAGTTGGTAGAGTTTTCCCGACGGAGGACTCGGCGCAGAAAC
TTCCTCCGTCCTCCCCCCGCCCCATGCAGGCGACGCCGAGTGAGGCTGAGGCTGCGGGCGAATC
GCCGCAGAGTTGCGTGTCGGCCGCGCATTCTGATTGGACAGCGGGGAAGCCCGTCAGCCTGTTG
GCCTCGCTGATCCCGCCCCGTAGCGCAGGGCAGCCTTTAACCTTTAGCCCCAGTGGGCGCCAGC
CACTCAGATCGCTTCTTGTTGGTATGTGTAGCGGCAGTGGCCGCCGGCGGAGCAGTCTGAGCCC
GACGATGAGGCCGGGGACGGGAGCTGAACGTGGAGGCCTCATGGTGAGTGAAATGGAGAGCCAT
CCTCCCTCGCAGGGTCCTGGGGACGGGGAGCGGAGATTGTCCGGCTCAAGCCTCTGCTCCGGCT
CTTGGGTCTCTGCTGACGGCTTCCTGAGGAGACGGCCCTCGATGGGGCACCCTGGCATGCATTA
TGCCCCAATGGGAATGCACCCTATGGGTCAGAGAGCGAATATGCCTCCTGTACCTCATGGAATG
ATGCCACAGATGATGCCCCCTATGGGAGGGCCACCAATGGGACAAATGCCTGGAATGATGTCGT
CAGTAATGCCTGGAATGATGATGTCTCATATGTCTCAGGCTTCCATGCAGCCTGCCTTACCGCC
AGGAGTAAATAGTATGGATGTAGCAGCAGGTACAGCATCTGGTGCAAAATCAATGTGGACTGAA
CATAAATCACCTGATGGAAGGACTTATTACTACAACACTGAAACCAAACAATCTACCTGGGAGA
AACCAGATGATCTCAAAACACCTGCTGAGCAACTCTTATCTAAATGCCCCTGGAAGGAATACAA
ATCAGATTCTGGAAAGCCTTACTATTACAATTCTCAAACAAAAGAATCTCGCTGGGCCAAACCT
AAAGAACTTGAGGATCTTGAAGGATACCAGAATACCATTGTTGCTGGAAGTCTTATTACAAAAT
CAAACCTGCATGCAATGATCAAAGCTGAAGAAAGCAGTAAGCAAGAAGAATGCACCACAACATC
AACAGCCCCAGTCCCTACAACAGAAATTCCGACCACAATGAGCACCATGGCTGCTGCAGAAGCA
GCAGCTGCTGTTGTTGCAGCTGCAGCAGCAGCAGCAGCTGCAGCAGCTGCAGCCAATGCTAATG
CTTCCACTTCTACTTCTAATACTGTCAGTGGAACTGTTCCAGTTGTTCCTGAGCCTGAAGTTAC
TTCCATTGTTGCTACTGTTGTAGATAATGAGAATACAGTAACTATTTCAACTGAGGAACAAGCA
CAACTTACTAGTACCCCTGCTATTCAGGATCAAAGTGTGGAAGTATCCAGTAATACTGGAGAAG
AAACATCTAAGCAAGAAACTGTAGCTGATTTTACTCCCAAAAAGGAAGAGGAGGAGAGCCAACC
AGCAAAGAAAACATACACTTGGAATACAAAGGAGGAGGCAAAGCAAGCTTTTAAAGAATTATTG
AAAGAAAAGCGGGTACCATCAAATGCTTCATGGGAGCAAGCTATGAAAATGATTATTAATGATC
CACGATACAGTGCTTTGGCAAAGTTAAGTGAAAAAAAGCAAGCCTTTAATGCCTATAAAGTCCA
GACAGAAAAAGAAGAAAAAGAAGAAGCAAGATCAAAGTACAAAGAGGCTAAGGAATCCTTTCAG
CGTTTTCTTGAAAATCATGAGAAAATGACTTCTACAACCAGATACAAAAAAGCAGAGCAAATGT
TTGGAGAGATGGAAGTTTGGAATGCAATATCAGAACGTGATCGTCTTGAAATCTACGAAGATGT
TCTGTTCTTTCTTTCAAAAAAAGAAAAGGAACAAGCAAAGCAGTTGCGAAAGAGAAATTGGGAA
GCCTTAAAAAACATACTTGACAACATGGCTAATGTAACATACTCTACCACTTGGTCTGAAGCCC
AGCAGTATCTGATGGATAATCCAACTTTTGCAGAAGATGAGGAGTTACAAAATATGGACAAAGA
AGATGCATTAATTTGCTTTGAAGAACACATTCGGGCTTTAGAAAAGGAGGAAGAAGAAGAAAAA
CAGAAGAGTTTGCTAAGAGAAAGGAGACGACAGCGAAAAAATAGGGAATCTTTCCAGATATTTT
TAGATGAATTACATGAACATGGACAACTACATTCTATGTCATCTTGGATGGAATTGTATCCAAC
TATTAGTTCTGATATTAGATTCACTAATATGCTTGGTCAGCCTGGATCAACTGCACTTGATCTT
TTCAAGTTTTATGTTGAGGATCTTAAAGCACGTTATCATGATGAGAAGAAGATAATAAAAGACA
TTCTAAAGGATAAAGGGTTTGTAGTTGAAGTAAATACCACTTTTGAAGATTTTGTGGCGATAAT
CAGTTCAACTAAAAGATCAACTACATTAGACGCTGGAAATATCAAATTGGCTTTCAATAGTTTA
CTAGAAAAGGCAGAAGCCCGTGAACGCGAAAGAGAAAAAGAAGAGGCTCGGAAGATGAAACGAA
AAGAGTCTGCATTTAAGAGTATGTTAAAACAAGCTGCTCCCCCGATAGAATTGGATGCTGTCTG
GGAAGATATCCGTGAGAGATTTGTAAAAGAGCCAGCATTTGAGGACATAACTCTAGAATCTGAA
AGAAAACGAATATTTAAAGATTTTATGCATGTGCTTGAGCATGAATGTCAGCATCATCATTCAA
AGAACAAGAAACATTCTAAGAAATCTAAAAAACATCATAGGAAACGTTCCCGCTCTCGATCGGG
GTCAGATTCAGATGATGATGATAGCCATTCAAAGAAAAAAAGACAACGATCAGAGTCTCGTTCT
GCTTCAGAACATTCTTCTAGTGCAGAGTCTGAGAGAAGTTACAAAAAGTCGAAAAAGCATAAGA
AGAAAAGTAAGAAGAGGAGACATAAATCTGACTCTCCAGAATCCGATGCTGAGCGAGAGAAGGA
TAAAAAAGAAAAAGATCGGGAAAGTGAAAAAGACAGAACTAGACAAAGATCAGAATCAAAACAC
AAATCGCCTAAGAAAAAGACTGGAAAGGATTCTGGTAATTGGGATACTTCTGGCAGTGAACTGA
GTGAAGGGGAATTGGAAAAGCGCAGAAGAACCCTTTTGGAGCAACTGGATGATGATCAATAAAT
TATACCAAATATATGTTTACAGTATGATTTAAAGTCTGATTCAGACCAGGGACTCTATTTCAAG
TTCAACTGAAGTAACACTGGGTTTTAATTATATCACAGGAAAAAAAAAAAGTGCATTTAAGTAT
TGTTATCGTGGACTTTATAAAAGCAAAGGAAATTGAAAATAACTTTTGATTCTGTATCAAGAAT
CATATTTTCATACAGTCATAACTGTCTTTCTGTGACCCTTTCACAGGGCACTGTAGGATGGATT
AAAGGTGGCAATTTACTGATAACTGCAGATGTCTCTACTTTGTTCTAAAATCTAAGTCATGAGG
TGATTTGATTTACTTTATAGAAGCTGGATTTTGAAGATATAATGAAAAATTTTTTGATAATATA
GTAGTACAAAAAAAGCACCAGCAACTGATAAAACTGCTTTTTTGTGCACTACCCAACTGGTTAC
AGCCAATGTGATCTTTTATGGTGAAACTCCTAAGAAATAGGTGGTTTTGCTGGAAACTTGGTAG
ACCCTTAATTATAGTGGTGCTAATGAGCACTACTGTAATATAAAGCCACCATTATTTTTTATCA
AACATCTGAATACATTTTACAAAGGCTATTGTGAGGGCATTATTTTGAGCATCTATTTTGAGGT
GATGTTTAAAAAAAACTTTAACATCAAATTGTAAATTAATTTAAATATATTGCCTTAAGGACCT
ACTAAAGAATGTGCCACCAGACTTTAAGTGATAGTTGCAATATCCTTGTCTAAAAAAAAGAAAA
AAAAACAGTTGACTTAAACATTTTCTTTAACAGTTGTCTTTTTTTTCTAAATTCAGTCTTTCTC
TTGCTTTTTTTCCCCCGCTATTGAGGAAGTATTTTGCCTTCCCTACTCACTGAGAAGTATTGAC
TTCGTGGTACACATTCTAAAGCATTTCTGATTTGAATATTTTTGTATATTTTTATCAATTATTA
AACCTTCTCTTCTAGTGTG

hide sequence

RefSeq Acc Id:

XM_007964979 ⟹ XP_007963170

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	38,087,300 - 38,151,458 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	161,416,176 - 161,480,948 (+)	NCBI

Sequence:

show sequence

GTTGTCTTCCCTTCCCCTGGGGAAGTTGGTAGAGTTTTCCCGACGGAGGACTCGGCGCAGAAAC
TTCCTCCGTCCTCCCCCCGCCCCATGCAGGCGACGCCGAGTGAGGCTGAGGCTGCGGGCGAATC
GCCGCAGAGTTGCGTGTCGGCCGCGCATTCTGATTGGACAGCGGGGAAGCCCGTCAGCCTGTTG
GCCTCGCTGATCCCGCCCCGTAGCGCAGGGCAGCCTTTAACCTTTAGCCCCAGTGGGCGCCAGC
CACTCAGATCGCTTCTTGTTGGTATGTGTAGCGGCAGTGGCCGCCGGCGGAGCAGTCTGAGCCC
GACGATGAGGCCGGGGACGGGAGCTGAACGTGGAGGCCTCATGGTGAGTGAAATGGAGAGCCAT
CCTCCCTCGCAGGGTCCTGGGGACGGGGAGCGGAGATTGTCCGGCTCAAGCCTCTGCTCCGGCT
CTTGGGTCTCTGCTGACGGCTTCCTGAGGAGACGGCCCTCGATGGGGCACCCTGGCATGCATTA
TGCCCCAATGGGAATGCACCCTATGGGTCAGAGAGCGAATATGCCTCCTGTACCTCATGGAATG
ATGCCACAGATGATGCCCCCTATGGGAGGGCCACCAATGGGACAAATGCCTGGAATGATGTCGT
CAGTAATGCCTGGAATGATGATGTCTCATATGTCTCAGGCTTCCATGCAGCCTGCCTTACCGCC
AGGAGTAAATAGTATGGATGTAGCAGCAGGTACAGCATCTGGTGCAAAATCAATGTGGACTGAA
CATAAATCACCTGATGGAAGGACTTATTACTACAACACTGAAACCAAACAATCTACCTGGGAGA
AACCAGATGATCTCAAAACACCTGCTGAGCAACTCTTATCTAAATGCCCCTGGAAGGAATACAA
ATCAGATTCTGGAAAGCCTTACTATTACAATTCTCAAACAAAAGAATCTCGCTGGGCCAAACCT
AAAGAACTTGAGGATCTTGAAGCAATGATCAAAGCTGAAGAAAGCAGTAAGCAAGAAGAATGCA
CCACAACATCAACAGCCCCAGTCCCTACAACAGAAATTCCGACCACAATGAGCACCATGGCTGC
TGCAGAAGCAGCAGCTGCTGTTGTTGCAGCTGCAGCAGCAGCAGCAGCTGCAGCAGCTGCAGCC
AATGCTAATGCTTCCACTTCTACTTCTAATACTGTCAGTGGAACTGTTCCAGTTGTTCCTGAGC
CTGAAGTTACTTCCATTGTTGCTACTGTTGTAGATAATGAGAATACAGTAACTATTTCAACTGA
GGAACAAGCACAACTTACTAGTACCCCTGCTATTCAGGATCAAAGTGTGGAAGTATCCAGTAAT
ACTGGAGAAGAAACATCTAAGCAAGAAACTGTAGCTGATTTTACTCCCAAAAAGGAAGAGGAGG
AGAGCCAACCAGCAAAGAAAACATACACTTGGAATACAAAGGAGGAGGCAAAGCAAGCTTTTAA
AGAATTATTGAAAGAAAAGCGGGTACCATCAAATGCTTCATGGGAGCAAGCTATGAAAATGATT
ATTAATGATCCACGATACAGTGCTTTGGCAAAGTTAAGTGAAAAAAAGCAAGCCTTTAATGCCT
ATAAAGTCCAGACAGAAAAAGAAGAAAAAGAAGAAGCAAGATCAAAGTACAAAGAGGCTAAGGA
ATCCTTTCAGCGTTTTCTTGAAAATCATGAGAAAATGACTTCTACAACCAGATACAAAAAAGCA
GAGCAAATGTTTGGAGAGATGGAAGTTTGGAATGCAATATCAGAACGTGATCGTCTTGAAATCT
ACGAAGATGTTCTGTTCTTTCTTTCAAAAAAAGAAAAGGAACAAGCAAAGCAGTTGCGAAAGAG
AAATTGGGAAGCCTTAAAAAACATACTTGACAACATGGCTAATGTAACATACTCTACCACTTGG
TCTGAAGCCCAGCAGTATCTGATGGATAATCCAACTTTTGCAGAAGATGAGGAGTTACAAAATA
TGGACAAAGAAGATGCATTAATTTGCTTTGAAGAACACATTCGGGCTTTAGAAAAGGAGGAAGA
AGAAGAAAAACAGAAGAGTTTGCTAAGAGAAAGGAGACGACAGCGAAAAAATAGGGAATCTTTC
CAGATATTTTTAGATGAATTACATGAACATGGACAACTACATTCTATGTCATCTTGGATGGAAT
TGTATCCAACTATTAGTTCTGATATTAGATTCACTAATATGCTTGGTCAGCCTGGATCAACTGC
ACTTGATCTTTTCAAGTTTTATGTTGAGGATCTTAAAGCACGTTATCATGATGAGAAGAAGATA
ATAAAAGACATTCTAAAGGATAAAGGGTTTGTAGTTGAAGTAAATACCACTTTTGAAGATTTTG
TGGCGATAATCAGTTCAACTAAAAGATCAACTACATTAGACGCTGGAAATATCAAATTGGCTTT
CAATAGTTTACTAGAAAAGGCAGAAGCCCGTGAACGCGAAAGAGAAAAAGAAGAGGCTCGGAAG
ATGAAACGAAAAGAGTCTGCATTTAAGAGTATGTTAAAACAAGCTGCTCCCCCGATAGAATTGG
ATGCTGTCTGGGAAGATATCCGTGAGAGATTTGTAAAAGAGCCAGCATTTGAGGACATAACTCT
AGAATCTGAAAGAAAACGAATATTTAAAGATTTTATGCATGTGCTTGAGCATGAATGTCAGCAT
CATCATTCAAAGAACAAGAAACATTCTAAGAAATCTAAAAAACATCATAGGAAACGTTCCCGCT
CTCGATCGGGGTCAGATTCAGATGATGATGATAGCCATTCAAAGAAAAAAAGACAACGATCAGA
GTCTCGTTCTGCTTCAGAACATTCTTCTAGTGCAGAGTCTGAGAGAAGTTACAAAAAGTCGAAA
AAGCATAAGAAGAAAAGTAAGAAGAGGAGACATAAATCTGACTCTCCAGAATCCGATGCTGAGC
GAGAGAAGGATAAAAAAGAAAAAGATCGGGAAAGTGAAAAAGACAGAACTAGACAAAGATCAGA
ATCAAAACACAAATCGCCTAAGAAAAAGACTGGAAAGGATTCTGGTAATTGGGATACTTCTGGC
AGTGAACTGAGTGAAGGGGAATTGGAAAAGCGCAGAAGAACCCTTTTGGAGCAACTGGATGATG
ATCAATAAATTATACCAAATATATGTTTACAGTATGATTTAAAGTCTGATTCAGACCAGGGACT
CTATTTCAAGTTCAACTGAAGTAACACTGGGTTTTAATTATATCACAGGAAAAAAAAAAAGTGC
ATTTAAGTATTGTTATCGTGGACTTTATAAAAGCAAAGGAAATTGAAAATAACTTTTGATTCTG
TATCAAGAATCATATTTTCATACAGTCATAACTGTCTTTCTGTGACCCTTTCACAGGGCACTGT
AGGATGGATTAAAGGTGGCAATTTACTGATAACTGCAGATGTCTCTACTTTGTTCTAAAATCTA
AGTCATGAGGTGATTTGATTTACTTTATAGAAGCTGGATTTTGAAGATATAATGAAAAATTTTT
TGATAATATAGTAGTACAAAAAAAGCACCAGCAACTGATAAAACTGCTTTTTTGTGCACTACCC
AACTGGTTACAGCCAATGTGATCTTTTATGGTGAAACTCCTAAGAAATAGGTGGTTTTGCTGGA
AACTTGGTAGACCCTTAATTATAGTGGTGCTAATGAGCACTACTGTAATATAAAGCCACCATTA
TTTTTTATCAAACATCTGAATACATTTTACAAAGGCTATTGTGAGGGCATTATTTTGAGCATCT
ATTTTGAGGTGATGTTTAAAAAAAACTTTAACATCAAATTGTAAATTAATTTAAATATATTGCC
TTAAGGACCTACTAAAGAATGTGCCACCAGACTTTAAGTGATAGTTGCAATATCCTTGTCTAAA
AAAAAGAAAAAAAAACAGTTGACTTAAACATTTTCTTTAACAGTTGTCTTTTTTTTCTAAATTC
AGTCTTTCTCTTGCTTTTTTTCCCCCGCTATTGAGGAAGTATTTTGCCTTCCCTACTCACTGAG
AAGTATTGACTTCGTGGTACACATTCTAAAGCATTTCTGATTTGAATATTTTTGTATATTTTTA
TCAATTATTAAACCTTCTCTTCTAGTGTG

hide sequence

RefSeq Acc Id:

XM_007964980 ⟹ XP_007963171

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	38,086,971 - 38,151,619 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	161,416,106 - 161,480,948 (+)	NCBI

Sequence:

show sequence

CTAACACTAGAGGCTGCTTACCCCCGCCCCCTCCACCCTGCCCCTGACGGCCTCAGGTTTGTGG
GGCGTACGTAACTCGGGCGGGGAGGGGGAAGGTGGCAGACCCCACTGCCCCACCCCCTACGGGG
TGAGGCGGTATAAGCTCGGGAAGCTGGGACACGGTTGTCTTCCCTTCCCCTGGGGAAGTTGGTA
GAGTTTTCCCGACGGAGGACTCGGCGCAGAAACTTCCTCCGTCCTCCCCCCGCCCCATGCAGGC
GACGCCGAGTGAGGCTGAGGCTGCGGGCGAATCGCCGCAGAGTTGCGTGTCGGCCGCGCATTCT
GATTGGACAGCGGGGAAGCCCGTCAGCCTGTTGGCCTCGCTGATCCCGCCCCGTAGCGCAGGGC
AGCCTTTAACCTTTAGCCCCAGTGGGCGCCAGCCACTCAGATCGCTTCTTGTTGGTATGTGTAG
CGGCAGTGGCCGCCGGCGGAGCAGTCTGAGCCCGACGATGAGGCCGGGGACGGGAGCTGAACGT
GGAGGCCTCATGATGGGGCACCCTGGCATGCATTATGCCCCAATGGGAATGCACCCTATGGGTC
AGAGAGCGAATATGCCTCCTGTACCTCATGGAATGATGCCACAGATGATGCCCCCTATGGGAGG
GCCACCAATGGGACAAATGCCTGGAATGATGTCGTCAGTAATGCCTGGAATGATGATGTCTCAT
ATGTCTCAGGCTTCCATGCAGCCTGCCTTACCGCCAGGAGTAAATAGTATGGATGTAGCAGCAG
GTACAGCATCTGGTGCAAAATCAATGTGGACTGAACATAAATCACCTGATGGAAGGACTTATTA
CTACAACACTGAAACCAAACAATCTACCTGGGAGAAACCAGATGATCTCAAAACACCTGCTGAG
CAACTCTTATCTAAATGCCCCTGGAAGGAATACAAATCAGATTCTGGAAAGCCTTACTATTACA
ATTCTCAAACAAAAGAATCTCGCTGGGCCAAACCTAAAGAACTTGAGGATCTTGAAGGATACCA
GAATACCATTGTTGCTGGAAGTCTTATTACAAAATCAAACCTGCATGCAATGATCAAAGCTGAA
GAAAGCAGTAAGCAAGAAGAATGCACCACAACATCAACAGCCCCAGTCCCTACAACAGAAATTC
CGACCACAATGAGCACCATGGCTGCTGCAGAAGCAGCAGCTGCTGTTGTTGCAGCTGCAGCAGC
AGCAGCAGCTGCAGCAGCTGCAGCCAATGCTAATGCTTCCACTTCTACTTCTAATACTGTCAGT
GGAACTGTTCCAGTTGTTCCTGAGCCTGAAGTTACTTCCATTGTTGCTACTGTTGTAGATAATG
AGAATACAGTAACTATTTCAACTGAGGAACAAGCACAACTTACTAGTACCCCTGCTATTCAGGA
TCAAAGTGTGGAAGTATCCAGTAATACTGGAGAAGAAACATCTAAGCAAGAAACTGTAGCTGAT
TTTACTCCCAAAAAGGAAGAGGAGGAGAGCCAACCAGCAAAGAAAACATACACTTGGAATACAA
AGGAGGAGGCAAAGCAAGCTTTTAAAGAATTATTGAAAGAAAAGCGGGTACCATCAAATGCTTC
ATGGGAGCAAGCTATGAAAATGATTATTAATGATCCACGATACAGTGCTTTGGCAAAGTTAAGT
GAAAAAAAGCAAGCCTTTAATGCCTATAAAGTCCAGACAGAAAAAGAAGAAAAAGAAGAAGCAA
GATCAAAGTACAAAGAGGCTAAGGAATCCTTTCAGCGTTTTCTTGAAAATCATGAGAAAATGAC
TTCTACAACCAGATACAAAAAAGCAGAGCAAATGTTTGGAGAGATGGAAGTTTGGAATGCAATA
TCAGAACGTGATCGTCTTGAAATCTACGAAGATGTTCTGTTCTTTCTTTCAAAAAAAGAAAAGG
AACAAGCAAAGCAGTTGCGAAAGAGAAATTGGGAAGCCTTAAAAAACATACTTGACAACATGGC
TAATGTAACATACTCTACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAATCCAACTTTT
GCAGAAGATGAGGAGTTACAAAATATGGACAAAGAAGATGCATTAATTTGCTTTGAAGAACACA
TTCGGGCTTTAGAAAAGGAGGAAGAAGAAGAAAAACAGAAGAGTTTGCTAAGAGAAAGGAGACG
ACAGCGAAAAAATAGGGAATCTTTCCAGATATTTTTAGATGAATTACATGAACATGGACAACTA
CATTCTATGTCATCTTGGATGGAATTGTATCCAACTATTAGTTCTGATATTAGATTCACTAATA
TGCTTGGTCAGCCTGTTTTTTCATTAGGATCAACTGCACTTGATCTTTTCAAGTTTTATGTTGA
GGATCTTAAAGCACGTTATCATGATGAGAAGAAGATAATAAAAGACATTCTAAAGGATAAAGGG
TTTGTAGTTGAAGTAAATACCACTTTTGAAGATTTTGTGGCGATAATCAGTTCAACTAAAAGAT
CAACTACATTAGACGCTGGAAATATCAAATTGGCTTTCAATAGTTTACTAGAAAAGGCAGAAGC
CCGTGAACGCGAAAGAGAAAAAGAAGAGGCTCGGAAGATGAAACGAAAAGAGTCTGCATTTAAG
AGTATGTTAAAACAAGCTGCTCCCCCGATAGAATTGGATGCTGTCTGGGAAGATATCCGTGAGA
GATTTGTAAAAGAGCCAGCATTTGAGGACATAACTCTAGAATCTGAAAGAAAACGAATATTTAA
AGATTTTATGCATGTGCTTGAGCATGAATGTCAGCATCATCATTCAAAGAACAAGAAACATTCT
AAGAAATCTAAAAAACATCATAGGAAACGTTCCCGCTCTCGATCGGGGTCAGATTCAGATGATG
ATGATAGCCATTCAAAGAAAAAAAGACAACGATCAGAGTCTCGTTCTGCTTCAGAACATTCTTC
TAGTGCAGAGTCTGAGAGAAGTTACAAAAAGTCGAAAAAGCATAAGAAGAAAAGTAAGAAGAGG
AGACATAAATCTGACTCTCCAGAATCCGATGCTGAGCGAGAGAAGGATAAAAAAGAAAAAGATC
GGGAAAGTGAAAAAGACAGAACTAGACAAAGATCAGAATCAAAACACAAATCGCCTAAGAAAAA
GACTGGAAAGGATTCTGGTAATTGGGATACTTCTGGCAGTGAACTGAGTGAAGGGGAATTGGAA
AAGCGCAGAAGAACCCTTTTGGAGCAACTGGATGATGATCAATAAATTATACCAAATATATGTT
TACAGTATGATTTAAAGTCTGATTCAGACCAGGGACTCTATTTCAAGTTCAACTGAAGTAACAC
TGGGTTTTAATTATATCACAGGAAAAAAAAAAAGTGCATTTAAGTATTGTTATCGTGGACTTTA
TAAAAGCAAAGGAAATTGAAAATAACTTTTGATTCTGTATCAAGAATCATATTTTCATACAGTC
ATAACTGTCTTTCTGTGACCCTTTCACAGGGCACTGTAGGATGGATTAAAGGTGGCAATTTACT
GATAACTGCAGATGTCTCTACTTTGTTCTAAAATCTAAGTCATGAGGTGATTTGATTTACTTTA
TAGAAGCTGGATTTTGAAGATATAATGAAAAATTTTTTGATAATATAGTAGTACAAAAAAAGCA
CCAGCAACTGATAAAACTGCTTTTTTGTGCACTACCCAACTGGTTACAGCCAATGTGATCTTTT
ATGGTGAAACTCCTAAGAAATAGGTGGTTTTGCTGGAAACTTGGTAGACCCTTAATTATAGTGG
TGCTAATGAGCACTACTGTAATATAAAGCCACCATTATTTTTTATCAAACATCTGAATACATTT
TACAAAGGCTATTGTGAGGGCATTATTTTGAGCATCTATTTTGAGGTGATGTTTAAAAAAAACT
TTAACATCAAATTGTAAATTAATTTAAATATATTGCCTTAAGGACCTACTAAAGAATGTGCCAC
CAGACTTTAAGTGATAGTTGCAATATCCTTGTCTAAAAAAAAGAAAAAAAAACAGTTGACTTAA
ACATTTTCTTTAACAGTTGTCTTTTTTTTCTAAATTCAGTCTTTCTCTTGCTTTTTTTCCCCCG
CTATTGAGGAAGTATTTTGCCTTCCCTACTCACTGAGAAGTATTGACTTCGTGGTACACATTCT
AAAGCATTTCTGATTTGAATATTTTTGTATATTTTTATCAATTATTAAACCTTCTCTTCTAGTG
TGTACTAGTATTTATTTCTACTTAAACTGCTCAGCTCTAAAGAAATTGTATGATCATTTTAAAG
GTACTAAATCCCTGAAATTTTGCTTCATCTTACCCACACAGCTAGTTTACTTTCCTTTTTTAAT
ATTTAAGAATATTATAAATCAGTGCATTTGAGGTCCCTAGATTTGTTTTTCACCTATGAATTTT
TTACAGACTATTTTAGAGAGGCAATGGTTTGAAGACAGAATACTCTACATGCTAACTTCTGAAG
GTTGGTAATGTAATTTATACTATTTTCCTTCAGTGCAGGAGATTTTTTAAGTAAATAAGTAAAT
TTTAGCACCTA

hide sequence

RefSeq Acc Id:

XM_007964981 ⟹ XP_007963172

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	10	38,087,300 - 38,151,458 (-)	NCBI
Vero_WHO_p1.0	NW_023666040	161,416,106 - 161,480,948 (+)	NCBI

Sequence:

show sequence

GTTGTCTTCCCTTCCCCTGGGGAAGTTGGTAGAGTTTTCCCGACGGAGGACTCGGCGCAGAAAC
TTCCTCCGTCCTCCCCCCGCCCCATGCAGGCGACGCCGAGTGAGGCTGAGGCTGCGGGCGAATC
GCCGCAGAGTTGCGTGTCGGCCGCGCATTCTGATTGGACAGCGGGGAAGCCCGTCAGCCTGTTG
GCCTCGCTGATCCCGCCCCGTAGCGCAGGGCAGCCTTTAACCTTTAGCCCCAGTGGGCGCCAGC
CACTCAGATCGCTTCTTGTTGGTATGTGTAGCGGCAGTGGCCGCCGGCGGAGCAGTCTGAGCCC
GACGATGAGGCCGGGGACGGGAGCTGAACGTGGAGGCCTCATGATGGGGCACCCTGGCATGCAT
TATGCCCCAATGGGAATGCACCCTATGGGTCAGAGAGCGAATATGCCTCCTGTACCTCATGGAA
TGATGCCACAGATGATGCCCCCTATGGGAGGGCCACCAATGGGACAAATGCCTGGAATGATGTC
GTCAGTAATGCCTGGAATGATGATGTCTCATATGTCTCAGGCTTCCATGCAGCCTGCCTTACCG
CCAGGAGTAAATAGTATGGATGTAGCAGCAGGTACAGCATCTGGTGCAAAATCAATGTGGACTG
AACATAAATCACCTGATGGAAGGACTTATTACTACAACACTGAAACCAAACAATCTACCTGGGA
GAAACCAGATGATCTCAAAACACCTGCTGAGCAACTCTTATCTAAATGCCCCTGGAAGGAATAC
AAATCAGATTCTGGAAAGCCTTACTATTACAATTCTCAAACAAAAGAATCTCGCTGGGCCAAAC
CTAAAGAACTTGAGGATCTTGAAGGATACCAGAATACCATTGTTGCTGGAAGTCTTATTACAAA
ATCAAACCTGCATGCAATGATCAAAGCTGAAGAAAGCAGTAAGCAAGAAGAATGCACCACAACA
TCAACAGCCCCAGTCCCTACAACAGAAATTCCGACCACAATGAGCACCATGGCTGCTGCAGAAG
CAGCAGCTGCTGTTGTTGCAGCTGCAGCAGCAGCAGCAGCTGCAGCAGCTGCAGCCAATGCTAA
TGCTTCCACTTCTACTTCTAATACTGTCAGTGGAACTGTTCCAGTTGTTCCTGAGCCTGAAGTT
ACTTCCATTGTTGCTACTGTTGTAGATAATGAGAATACAGTAACTATTTCAACTGAGGAACAAG
CACAACTTACTAGTACCCCTGCTATTCAGGATCAAAGTGTGGAAGTATCCAGTAATACTGGAGA
AGAAACATCTAAGCAAGAAACTGTAGCTGATTTTACTCCCAAAAAGGAAGAGGAGGAGAGCCAA
CCAGCAAAGAAAACATACACTTGGAATACAAAGGAGGAGGCAAAGCAAGCTTTTAAAGAATTAT
TGAAAGAAAAGCGGGTACCATCAAATGCTTCATGGGAGCAAGCTATGAAAATGATTATTAATGA
TCCACGATACAGTGCTTTGGCAAAGTTAAGTGAAAAAAAGCAAGCCTTTAATGCCTATAAAGTC
CAGACAGAAAAAGAAGAAAAAGAAGAAGCAAGATCAAAGTACAAAGAGGCTAAGGAATCCTTTC
AGCGTTTTCTTGAAAATCATGAGAAAATGACTTCTACAACCAGATACAAAAAAGCAGAGCAAAT
GTTTGGAGAGATGGAAGTTTGGAATGCAATATCAGAACGTGATCGTCTTGAAATCTACGAAGAT
GTTCTGTTCTTTCTTTCAAAAAAAGAAAAGGAACAAGCAAAGCAGTTGCGAAAGAGAAATTGGG
AAGCCTTAAAAAACATACTTGACAACATGGCTAATGTAACATACTCTACCACTTGGTCTGAAGC
CCAGCAGTATCTGATGGATAATCCAACTTTTGCAGAAGATGAGGAGTTACAAAATATGGACAAA
GAAGATGCATTAATTTGCTTTGAAGAACACATTCGGGCTTTAGAAAAGGAGGAAGAAGAAGAAA
AACAGAAGAGTTTGCTAAGAGAAAGGAGACGACAGCGAAAAAATAGGGAATCTTTCCAGATATT
TTTAGATGAATTACATGAACATGGACAACTACATTCTATGTCATCTTGGATGGAATTGTATCCA
ACTATTAGTTCTGATATTAGATTCACTAATATGCTTGGTCAGCCTGGATCAACTGCACTTGATC
TTTTCAAGTTTTATGTTGAGGATCTTAAAGCACGTTATCATGATGAGAAGAAGATAATAAAAGA
CATTCTAAAGGATAAAGGGTTTGTAGTTGAAGTAAATACCACTTTTGAAGATTTTGTGGCGATA
ATCAGTTCAACTAAAAGATCAACTACATTAGACGCTGGAAATATCAAATTGGCTTTCAATAGTT
TACTAGAAAAGGCAGAAGCCCGTGAACGCGAAAGAGAAAAAGAAGAGGCTCGGAAGATGAAACG
AAAAGAGTCTGCATTTAAGAGTATGTTAAAACAAGCTGCTCCCCCGATAGAATTGGATGCTGTC
TGGGAAGATATCCGTGAGAGATTTGTAAAAGAGCCAGCATTTGAGGACATAACTCTAGAATCTG
AAAGAAAACGAATATTTAAAGATTTTATGCATGTGCTTGAGCATGAATGTCAGCATCATCATTC
AAAGAACAAGAAACATTCTAAGAAATCTAAAAAACATCATAGGAAACGTTCCCGCTCTCGATCG
GGGTCAGATTCAGATGATGATGATAGCCATTCAAAGAAAAAAAGACAACGATCAGAGTCTCGTT
CTGCTTCAGAACATTCTTCTAGTGCAGAGTCTGAGAGAAGTTACAAAAAGTCGAAAAAGCATAA
GAAGAAAAGTAAGAAGAGGAGACATAAATCTGACTCTCCAGAATCCGATGCTGAGCGAGAGAAG
GATAAAAAAGAAAAAGATCGGGAAAGTGAAAAAGACAGAACTAGACAAAGATCAGAATCAAAAC
ACAAATCGCCTAAGAAAAAGACTGGAAAGGATTCTGGTAATTGGGATACTTCTGGCAGTGAACT
GAGTGAAGGGGAATTGGAAAAGCGCAGAAGAACCCTTTTGGAGCAACTGGATGATGATCAATAA
ATTATACCAAATATATGTTTACAGTATGATTTAAAGTCTGATTCAGACCAGGGACTCTATTTCA
AGTTCAACTGAAGTAACACTGGGTTTTAATTATATCACAGGAAAAAAAAAAAGTGCATTTAAGT
ATTGTTATCGTGGACTTTATAAAAGCAAAGGAAATTGAAAATAACTTTTGATTCTGTATCAAGA
ATCATATTTTCATACAGTCATAACTGTCTTTCTGTGACCCTTTCACAGGGCACTGTAGGATGGA
TTAAAGGTGGCAATTTACTGATAACTGCAGATGTCTCTACTTTGTTCTAAAATCTAAGTCATGA
GGTGATTTGATTTACTTTATAGAAGCTGGATTTTGAAGATATAATGAAAAATTTTTTGATAATA
TAGTAGTACAAAAAAAGCACCAGCAACTGATAAAACTGCTTTTTTGTGCACTACCCAACTGGTT
ACAGCCAATGTGATCTTTTATGGTGAAACTCCTAAGAAATAGGTGGTTTTGCTGGAAACTTGGT
AGACCCTTAATTATAGTGGTGCTAATGAGCACTACTGTAATATAAAGCCACCATTATTTTTTAT
CAAACATCTGAATACATTTTACAAAGGCTATTGTGAGGGCATTATTTTGAGCATCTATTTTGAG
GTGATGTTTAAAAAAAACTTTAACATCAAATTGTAAATTAATTTAAATATATTGCCTTAAGGAC
CTACTAAAGAATGTGCCACCAGACTTTAAGTGATAGTTGCAATATCCTTGTCTAAAAAAAAGAA
AAAAAAACAGTTGACTTAAACATTTTCTTTAACAGTTGTCTTTTTTTTCTAAATTCAGTCTTTC
TCTTGCTTTTTTTCCCCCGCTATTGAGGAAGTATTTTGCCTTCCCTACTCACTGAGAAGTATTG
ACTTCGTGGTACACATTCTAAAGCATTTCTGATTTGAATATTTTTGTATATTTTTATCAATTAT
TAAACCTTCTCTTCTAGTGTG

hide sequence

RefSeq Acc Id:

XM_038002111 ⟹ XP_037858039

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666040	161,416,175 - 161,480,948 (+)	NCBI

RefSeq Acc Id:

XM_038002112 ⟹ XP_037858040

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666040	161,416,106 - 161,480,948 (+)	NCBI

RefSeq Acc Id:

XM_038002113 ⟹ XP_037858041

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666040	161,416,106 - 161,478,985 (+)	NCBI

RefSeq Acc Id:

XM_038002114 ⟹ XP_037858042

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666040	161,416,070 - 161,480,948 (+)	NCBI

RefSeq Acc Id:

XM_038002115 ⟹ XP_037858043

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666040	161,416,612 - 161,480,948 (+)	NCBI

RefSeq Acc Id:

XM_038002116 ⟹ XP_037858044

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666040	161,416,612 - 161,480,948 (+)	NCBI

RefSeq Acc Id:

XM_038002117 ⟹ XP_037858045

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666040	161,416,612 - 161,480,948 (+)	NCBI

RefSeq Acc Id:

XM_038002118 ⟹ XP_037858046

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666040	161,416,612 - 161,480,948 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007963168	(Get FASTA)	NCBI Sequence Viewer
	XP_007963169	(Get FASTA)	NCBI Sequence Viewer
	XP_007963170	(Get FASTA)	NCBI Sequence Viewer
	XP_007963171	(Get FASTA)	NCBI Sequence Viewer
	XP_007963172	(Get FASTA)	NCBI Sequence Viewer
	XP_037858039	(Get FASTA)	NCBI Sequence Viewer
	XP_037858040	(Get FASTA)	NCBI Sequence Viewer
	XP_037858041	(Get FASTA)	NCBI Sequence Viewer
	XP_037858042	(Get FASTA)	NCBI Sequence Viewer
	XP_037858043	(Get FASTA)	NCBI Sequence Viewer
	XP_037858044	(Get FASTA)	NCBI Sequence Viewer
	XP_037858045	(Get FASTA)	NCBI Sequence Viewer
	XP_037858046	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000012071.1

RefSeq Acc Id:	XP_007963168 ⟸ XM_007964977
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007963171 ⟸ XM_007964980
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_007963172 ⟸ XM_007964981
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_007963170 ⟸ XM_007964979
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_007963169 ⟸ XM_007964978
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSCSAP00000012071 ⟸ ENSCSAT00000014091

RefSeq Acc Id:	XP_037858042 ⟸ XM_038002114
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_037858040 ⟸ XM_038002112
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_037858041 ⟸ XM_038002113
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_037858039 ⟸ XM_038002111
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_037858043 ⟸ XM_038002115
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_037858045 ⟸ XM_038002117
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_037858044 ⟸ XM_038002116
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_037858046 ⟸ XM_038002118
- Peptide Label:	isoform X12

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000016002	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000014091.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.10.440	UniProtKB/TrEMBL
	2.20.70.10	UniProtKB/TrEMBL
InterPro	FF_domain	UniProtKB/TrEMBL
	FF_domain_sf	UniProtKB/TrEMBL
	Prp40-like	UniProtKB/TrEMBL
	WW_dom	UniProtKB/TrEMBL
	WW_dom_sf	UniProtKB/TrEMBL
NCBI Gene	PRPF40A	ENTREZGENE
PANTHER	PRE-MRNA-PROCESSING FACTOR 40 HOMOLOG A	UniProtKB/TrEMBL
	PTHR11864	UniProtKB/TrEMBL
Pfam	PF00397	UniProtKB/TrEMBL
	PF01846	UniProtKB/TrEMBL
PROSITE	PS51676	UniProtKB/TrEMBL
	WW_DOMAIN_1	UniProtKB/TrEMBL
	WW_DOMAIN_2	UniProtKB/TrEMBL
SMART	SM00441	UniProtKB/TrEMBL
	SM00456	UniProtKB/TrEMBL
Superfamily-SCOP	SSF51045	UniProtKB/TrEMBL
	SSF81698	UniProtKB/TrEMBL
UniProt	A0A0D9RTY2_CHLSB	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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