CENPC (centromere protein C) - Rat Genome Database

Name: CENPC
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: CENPC (centromere protein C) Chlorocebus sabaeus

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Symbol:

CENPC

Name:

centromere protein C

RGD ID:

18544800

Description:

ENCODES a protein that exhibits centromeric DNA binding (inferred); identical protein binding (inferred); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (inferred); chromosome segregation (inferred); kinetochore assembly (inferred); ASSOCIATED WITH CREST syndrome (ortholog); liver cirrhosis (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN condensed chromosome, centromeric region (inferred); inner kinetochore (inferred); kinetochore (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CENPC (centromere protein C)	NCBI	Ortholog
Mus musculus (house mouse):	Cenpc1 (centromere protein C1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cenpc (centromere protein C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cenpc (centromere protein C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CENPC (centromere protein C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cenpc (centromere protein C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CENPC (centromere protein C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cenpc (centromere protein C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	1,393,336 - 1,464,189 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	1,393,348 - 1,467,989 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666066	1,480,301 - 1,552,594 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

CREST syndrome (ISO)

liver cirrhosis (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

attachment of mitotic spindle microtubules to kinetochore (IEA)

chromosome segregation (IEA)

kinetochore assembly (IEA)

mitotic cell cycle (IEA)

spindle attachment to meiosis I kinetochore (IEA)

Cellular Component

condensed chromosome, centromeric region (IEA)

inner kinetochore (IEA)

kinetochore (IEA)

midbody (IEA)

nuclear body (IEA)

nucleoplasm (IEA)

nucleus (IEA)

pericentric heterochromatin (IEA)

Molecular Function

centromeric DNA binding (IEA)

identical protein binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

CENPC
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	1,393,336 - 1,464,189 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	1,393,348 - 1,467,989 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666066	1,480,301 - 1,552,594 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

CENPC
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	67,468,762 - 67,545,503 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	67,468,762 - 67,545,503 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	68,334,480 - 68,411,221 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	68,020,584 - 68,093,851 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	68,166,961 - 68,239,995	NCBI
Celera	4	65,800,619 - 65,873,659 (-)	NCBI		Celera
Cytogenetic Map	4	q13.2	NCBI
HuRef	4	64,251,196 - 64,324,430 (-)	NCBI		HuRef
CHM1_1	4	68,375,177 - 68,448,439 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	70,911,881 - 70,988,601 (-)	NCBI		T2T-CHM13v2.0

Cenpc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	86,159,877 - 86,214,325 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	86,159,883 - 86,213,442 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	86,012,018 - 86,065,962 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	86,012,024 - 86,065,583 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	86,441,049 - 86,494,608 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	87,086,585 - 87,140,032 (-)	NCBI		MGSCv36	mm8
Celera	5	83,243,963 - 83,297,482 (-)	NCBI		Celera
Cytogenetic Map	5	E1	NCBI
cM Map	5	43.56	NCBI

Cenpc
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	22,342,910 - 22,401,522 (+)	NCBI		GRCr8
mRatBN7.2	14	21,988,067 - 22,046,732 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	21,988,144 - 22,055,476 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	22,344,912 - 22,404,654 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	23,657,349 - 23,717,084 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	22,188,431 - 22,248,172 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	23,611,909 - 23,670,314 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	23,611,735 - 23,670,475 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	23,515,129 - 23,571,976 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	23,771,576 - 23,829,980 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	23,771,575 - 23,829,977 (+)	NCBI
Celera	14	21,462,361 - 21,520,618 (+)	NCBI		Celera
Cytogenetic Map	14	p21	NCBI

Cenpc
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955447	5,345,896 - 5,406,730 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955447	5,345,617 - 5,406,889 (+)	NCBI	ChiLan1.0	ChiLan1.0

CENPC
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	58,013,218 - 58,091,347 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	58,013,212 - 58,231,200 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	57,928,845 - 58,006,993 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	58,634,688 - 58,702,538 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	58,634,844 - 58,702,350 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	58,350,980 - 58,428,821 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	57,841,062 - 57,919,053 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	58,850,883 - 58,929,219 (-)	NCBI		UU_Cfam_GSD_1.0

Cenpc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	18,357,663 - 18,414,077 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936582	920,833 - 981,373 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936582	920,852 - 978,167 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CENPC
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	65,238,090 - 65,315,713 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	65,237,825 - 65,315,788 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	69,658,715 - 69,740,181 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Cenpc
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624761	1,422,857 - 1,498,726 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007998582	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007998583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007998584	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007998585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037989399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037989400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000003236 ⟹ ENSCSAP00000001520

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	7	1,393,348 - 1,467,989 (+)	Ensembl

RefSeq Acc Id:

XM_007998583 ⟹ XP_007996774

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	7	1,393,338 - 1,464,189 (+)	NCBI
Vero_WHO_p1.0	NW_023666066	1,480,301 - 1,552,594 (+)	NCBI

Sequence:

show sequence

GGCGGGGAAGTGTTGTTAGCGCGCGCCTTCCGGATCGCAGTGCTTGCTGCTGTCGCCTTGTACT
TAGGGGTGTTGCTTGGCCGCCGCCTGGTAGTCTGACGGTTCATTTCTTGCTCGGCCTCCTGGAG
TTGTGGTCCGTGTGGGCTTCCACCTCAGACCCCTGCGCTGGCTCAGCGGGGCCGGAGCATGGCT
GCGTCGGGTCTAGATCATCTCAAAAATGGCTACAGAAGAAGATTTTGTCGACCTTCCAGGGCAC
GTGACATTAACACACAGCAAGGCCAGAATGTTCTGAAAATCTTACAAGACTGTTTTGAAGAACA
AAGTCTTGCCAATGATTTTAGTACAAATTCTACAAAATCAGTGCTTTATTCCACACACAAAATA
AAAGACACTTGTATTCAGTCACGAAGCAAAGAGTGCCAGAAATCACATCCAAAGTCAGTTCCAG
TTTCTTCAAGGAAGAAAGAAGCCTCTCTGCAGTTTGTTGTAGAACCAAGTGAAGCCACCAACAG
ATCAGTTCAGGCCCATGAAGTTCGTCAGAAAATTCTGGCAACCGATGTTAGTTCCAAAAATACA
TCTGACCCGAAAAAAATGTCAAGTAGAAACATAAATGATTATCACAGTGATGCTGGTGAAGAAT
TTTACTTATCTGTTGGCTCACCTTCTGTTCTTTTGGATGCAAAAACATCTGTATCGCAAAATGT
TATTCCATCTAGTGCCCAAAAGAGAGAGACTTACACTTTTGAAAATTCAGTAAATACGCTGCCT
TCAAGTACAGAGGTTTCACTTAAAACCAAAAAAAGGTTAAACTTTGAAGATAAAGTTATGTTAA
AGAAAATAGAAATAGATAATAAAGTATCAGATGAAGAGTATAAAACATCAGAAGGACAAGAAAG
AAAACCATCAGGATCATCTCAGAATATAACACGAGATTCAGAATATGAAATTCAACGAAAAGCT
AAAAAAAGTTTTTCAACATTGTTTTTAGAAACAGTAAAACGAAAAAGTAAATCCAGTCCCATTG
TTAGGCATGCGGCAACTGCTCCACCTCATTCGTGTCCTCCCGATGATAAGAAGGTGATAGAGGA
TGAATTTATAATTGATGAGTCAGATCAAAGTTTTGCCAGTAGATCTTGGATTACAATACCAAGA
AAGGCAGGGCCTCTGAAACAACGCCCAATATCTCCGGCTGAGAGCACTGCACTGCTTCAAAATA
GAAAGTCAAGAGAAAAGCATCATAATATATTACCTAAGACTTTGGCAAATGGCAAACATTCTCA
TGAACCTCACCCAGTAGAACCATCTCAGTCCTCTGATAAAACAGTACTGGATACAAGTTGTGCT
TTGACAGGTGAAACGGAAAATGATTGTAAATCTGCAAAATATGAAATGTGTTCCAAGGATGCAG
AAAAATCATCTGGAAGCAAAAGGACTATAAAACAAAAACAGAGAAGAAAATTTAAGGCTAAACC
AGCTGAAGAACAGCTTGATGTGGGACAGTCTAAAGATGAAAACATACGTATGTCACATACTACC
CAAGACAAATTTCAAAGAAATTCAGACAGAAATATAGAAGAGCGTGAAGAGATAGGAGATGATT
GTGTTTCCAATAAACAGATGTCACCTGTGGGAAGCAAGAAAAGTAGCGCTAAAAAAGATAAGGG
AGAAGCTAAAAAGAAGCACTTTTCCAATGAGTCCAAGAACAAACTTGTGCCTGAAGAAGTGATT
TCAACTGTCACGAGAAGTCGAAGAATTTCCAGACATCCATCTGATTGGTGGGTGGTAAAATCAG
AGGAGAGTCCTGTTTATAGCAATTCTTCAATAAGAAATGAATTACCAGTGCATCGCAACAGTAG
CCAAAAATCTGCTAAGAAAACAAATCAGTCATCTAAGAATATTGGAGAAAAAACTATTCCACTT
AAAAGGCAGAAGATAGCAACTAAAGGCAACCAAAGAGTACAGAAGTTTTTACATGCTAAAGGTT
CTGGAGGTACCGTTGGTCATGATGAAATTTCCAGTTGTTCGCTGAGTGAGCCATTGGAAAGTGA
TGAGGAAGACTTGGCTAAGAAGAAAAATCTTTATTGTTCTAGATCTACAAGAAGCTCAAAAAAG
GAAGATAATGTTATGACTGCACAGCATGTTCCCCTAAAGCCTCAGACCAGTGGATATACATATA
ACACACCAACAGAATCAAGCTTGGATTCTGGAGAGCGTAAGACTTTAGTTTTAGAGGAAAGTGG
ACCTTCCAGGCTCAGTAATAATTATTTAACGTCTGGAAAGAAGAATAATGATGTGGATGAGGAG
GAAGTTCATGGAAGTTCAGATGACTCAAAACGATCTAAAGTGATACCAAAGAACAGAATCCATC
ACAAACTAGTATTGCCCTCCAACACACCAAATGTTCGCAGGACCAAGAGAACACGTTTGAAACC
TTTGGAGTACTGGCGAGGAGAGCGAATAGATTATCAAGGAAGGCCATCAGGAGGATTCGTGATT
GGTGGGATACTGTCTCCAGACACAATGTCGTCTAAAAGGAAGGCAAAAGAAAATATTGGAAAAG
TCGACAAAAAGTCTAATAAGAAAAGGATCTGTCTTGATAATGATGAAAGAAAGACTAGCTTAAT
GGTAAATCTAGGTATACCTCTTGGAGATCCTTTGCAGCCAACGAGGGTAAAGGACCCAGAAACA
AGAGAGATTATTCTCATGGATCTTGTAAGGCCACAAGATACATATCAATTTTTTGTTAAACATG
GTGAGTTGAAGGTATATAAGACATTGGACACACCCTTTTTTTCTACTGGGAAATTGATATTAGG
ACCACAAGAGGAAAAGGGAAAGCAGCATGTTGGCCAAGATATATTGGTTTTTTATGTTAACTTT
GGTGACCTTTTGTGTACTTTACACGAAACACCTTATATAATAAGTACTGGGGATTCGTTCTATG
TTCCTTCAGGTAACTATTATAACATCAAAAATCTCCTGAATGAGGAAAGTGTTCTTCTTTTTAC
TCAGATAAAAAGATGAAAGATCAACCAAGCTGAAATATGTGTGTATATATGTATATGTGAAAAA
CAGTTTGTATAGTTGGGACATTTGTCTTTGTAATTACTTATGATGTTTTAAAATAAAAATTTTA
TTCATTTTTGTGTA

hide sequence

RefSeq Acc Id:

XM_007998585 ⟹ XP_007996776

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	7	1,402,421 - 1,464,189 (+)	NCBI
Vero_WHO_p1.0	NW_023666066	1,490,809 - 1,552,594 (+)	NCBI

Sequence:

show sequence

CTCTGGGCTCGGGTGATCCTCCTGCCTCAGCCTCCTGAGTAGTGCCAGAAATCACATCCAAAGT
CAGTTCCAGTTTCTTCAAGGAAGAAAGAAGCCTCTCTGCAGTTTGTTGTAGAACCAAGTGAAGC
CACCAACAGATCAGTTCAGGCCCATGAAGTTCGTCAGAAAATTCTGGCAACCGATGTTAGTTCC
AAAAATACATCTGACCCGAAAAAAATGTCAAGTAGAAACATAAATGATTATCACAGTGATGCTG
GTGAAGAATTTTACTTATCTGTTGGCTCACCTTCTGTTCTTTTGGATGCAAAAACATCTGTATC
GCAAAATGTTATTCCATCTAGTGCCCAAAAGAGAGAGACTTACACTTTTGAAAATTCAGTAAAT
ACGCTGCCTTCAAGTACAGAGGTTTCACTTAAAACCAAAAAAAGGTTAAACTTTGAAGATAAAG
TTATGTTAAAGAAAATAGAAATAGATAATAAAGTATCAGATGAAGAGTATAAAACATCAGAAGG
ACAAGAAAGAAAACCATCAGGATCATCTCAGAATATAACACGAGATTCAGAATATGAAATTCAA
CGAAAAGCTAAAAAAAGTTTTTCAACATTGTTTTTAGAAACAGTAAAACGAAAAAGTAAATCCA
GTCCCATTGTTAGGCATGCGGCAACTGCTCCACCTCATTCGTGTCCTCCCGATGATAAGAAGGT
GATAGAGGATGAATTTATAATTGATGAGTCAGATCAAAGTTTTGCCAGTAGATCTTGGATTACA
ATACCAAGAAAGGCAGGGCCTCTGAAACAACGCCCAATATCTCCGGCTGAGAGCACTGCACTGC
TTCAAAATAGAAAGTCAAGAGAAAAGCATCATAATATATTACCTAAGACTTTGGCAAATGGCAA
ACATTCTCATGAACCTCACCCAGTAGAACCATCTCAGTCCTCTGATAAAACAGTACTGGATACA
AGTTGTGCTTTGACAGGTGAAACGGAAAATGATTGTAAATCTGCAAAATATGAAATGTGTTCCA
AGGATGCAGAAAAATCATCTGGAAGCAAAAGGACTATAAAACAAAAACAGAGAAGAAAATTTAA
GGCTAAACCAGCTGAAGAACAGCTTGATGTGGGACAGTCTAAAGATGAAAACATACGTATGTCA
CATACTACCCAAGACAAATTTCAAAGAAATTCAGACAGAAATATAGAAGAGCGTGAAGAGATAG
GAGATGATTGTGTTTCCAATAAACAGATGTCACCTGTGGGAAGCAAGAAAAGTAGCGCTAAAAA
AGATAAGGGAGAAGCTAAAAAGAAGCACTTTTCCAATGAGTCCAAGAACAAACTTGTGCCTGAA
GAAGTGATTTCAACTGTCACGAGAAGTCGAAGAATTTCCAGACATCCATCTGATTGGTGGGTGG
TAAAATCAGAGGAGAGTCCTGTTTATAGCAATTCTTCAATAAGAAATGAATTACCAGTGCATCG
CAACAGTAGCCAAAAATCTGCTAAGAAAACAAATCAGTCATCTAAGAATATTGGAGAAAAAACT
ATTCCACTTAAAAGGCAGAAGATAGCAACTAAAGGCAACCAAAGAGTACAGAAGTTTTTACATG
CTAAAGGTTCTGGAGGTACCGTTGGTCATGATGAAATTTCCAGTTGTTCGCTGAGTGAGCCATT
GGAAAGTGATGAGGAAGACTTGGCTAAGAAGAAAAATCTTTATTGTTCTAGATCTACAAGAAGC
TCAAAAAAGGAAGATAATGTTATGACTGCACAGCATGTTCCCCTAAAGCCTCAGACCAGTGGAT
ATACATATAACACACCAACAGAATCAAGCTTGGATTCTGGAGAGCGTAAGACTTTAGTTTTAGA
GGAAAGTGGACCTTCCAGGCTCAGTAATAATTATTTAACGTCTGGAAAGAAGAATAATGATGTG
GATGAGGAGGAAGTTCATGGAAGTTCAGATGACTCAAAACGATCTAAAGTGATACCAAAGAACA
GAATCCATCACAAACTAGTATTGCCCTCCAACACACCAAATGTTCGCAGGACCAAGAGAACACG
TTTGAAACCTTTGGAGTACTGGCGAGGAGAGCGAATAGATTATCAAGGAAGGCCATCAGGAGGA
TTCGTGATTGGTGGGATACTGTCTCCAGACACAATGTCGTCTAAAAGGAAGGCAAAAGAAAATA
TTGGAAAAGTCGACAAAAAGTCTAATAAGAAAAGGATCTGTCTTGATAATGATGAAAGAAAGAC
TAGCTTAATGGTAAATCTAGGTATACCTCTTGGAGATCCTTTGCAGCCAACGAGGGTAAAGGAC
CCAGAAACAAGAGAGATTATTCTCATGGATCTTGTAAGGCCACAAGATACATATCAATTTTTTG
TTAAACATGGTGAGTTGAAGGTATATAAGACATTGGACACACCCTTTTTTTCTACTGGGAAATT
GATATTAGGACCACAAGAGGAAAAGGGAAAGCAGCATGTTGGCCAAGATATATTGGTTTTTTAT
GTTAACTTTGGTGACCTTTTGTGTACTTTACACGAAACACCTTATATAATAAGTACTGGGGATT
CGTTCTATGTTCCTTCAGGTAACTATTATAACATCAAAAATCTCCTGAATGAGGAAAGTGTTCT
TCTTTTTACTCAGATAAAAAGATGAAAGATCAACCAAGCTGAAATATGTGTGTATATATGTATA
TGTGAAAAACAGTTTGTATAGTTGGGACATTTGTCTTTGTAATTACTTATGATGTTTTAAAATA
AAAATTTTATTCATTTTTGTGTA

hide sequence

RefSeq Acc Id:

XM_037989399 ⟹ XP_037845327

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666066	1,480,301 - 1,552,594 (+)	NCBI

RefSeq Acc Id:

XM_037989400 ⟹ XP_037845328

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666066	1,480,606 - 1,552,594 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007996774	(Get FASTA)	NCBI Sequence Viewer
	XP_007996776	(Get FASTA)	NCBI Sequence Viewer
	XP_037845327	(Get FASTA)	NCBI Sequence Viewer
	XP_037845328	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000001520.1

RefSeq Acc Id:	XP_007996774 ⟸ XM_007998583
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9QYT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007996776 ⟸ XM_007998585
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9QYT1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000001520 ⟸ ENSCSAT00000003236

RefSeq Acc Id:	XP_037845327 ⟸ XM_037989399
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9QYT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037845328 ⟸ XM_037989400
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9QYT1 (UniProtKB/TrEMBL)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000005202	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000003236.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.10	UniProtKB/TrEMBL
InterPro	CENP-C/Mif2/cnp3	UniProtKB/TrEMBL
	CENP-C_mid	UniProtKB/TrEMBL
	CENP_C_N_dom	UniProtKB/TrEMBL
	Mif2/CENP-C_cupin	UniProtKB/TrEMBL
	RmlC-like_jellyroll	UniProtKB/TrEMBL
	RmlC_Cupin_sf	UniProtKB/TrEMBL
NCBI Gene	CENPC	ENTREZGENE
PANTHER	CENTROMERE PROTEIN C	UniProtKB/TrEMBL
	PTHR16684	UniProtKB/TrEMBL
Pfam	CENP-C_C	UniProtKB/TrEMBL
	CENP-C_mid	UniProtKB/TrEMBL
	CENP_C_N	UniProtKB/TrEMBL
Superfamily-SCOP	SSF51182	UniProtKB/TrEMBL
UniProt	A0A0D9QYT1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar