CPT2 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 20 | 79,710,638 - 79,728,100 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 79,706,584 - 79,727,689 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666033 | 37,554,717 - 37,572,175 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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CPT2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 53,196,824 - 53,214,197 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 53,196,792 - 53,214,197 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 53,662,496 - 53,679,869 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 53,434,689 - 53,452,455 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 53,374,121 - 53,391,888 | NCBI | | | | | Celera | 1 | 51,949,941 - 51,967,712 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | p32.3 | NCBI | | | | | HuRef | 1 | 51,777,752 - 51,795,523 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 53,779,095 - 53,796,864 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 53,078,266 - 53,095,633 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Cpt2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 4 | 107,761,179 - 107,780,786 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 107,761,178 - 107,780,807 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 107,903,982 - 107,923,589 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 107,903,981 - 107,923,610 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 107,576,587 - 107,596,194 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 107,401,914 - 107,421,466 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 106,252,864 - 106,272,513 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | C7 | NCBI | | | | | cM Map | 4 | 50.18 | NCBI | | | | |
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Cpt2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 127,893,450 - 127,911,347 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 122,664,677 - 122,682,126 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 122,664,677 - 122,682,095 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 125,284,849 - 125,302,210 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 127,007,897 - 127,025,259 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 127,059,205 - 127,076,568 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 127,505,646 - 127,523,016 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 127,505,614 - 127,523,089 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 131,353,542 - 131,370,821 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 129,007,685 - 129,025,501 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 129,012,910 - 129,030,727 (-) | NCBI | | | | | Celera | 5 | 121,406,314 - 121,423,718 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q34 | NCBI | | | | |
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Cpt2 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955464 | 5,942,986 - 5,970,345 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955464 | 5,942,986 - 5,970,325 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CPT2 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 173,623,572 - 173,641,027 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 172,764,332 - 172,781,782 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 52,469,416 - 52,487,166 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 54,069,334 - 54,086,994 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 54,069,334 - 54,086,994 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CPT2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 55,718,209 - 55,786,175 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 55,718,510 - 55,744,809 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 55,784,409 - 55,811,033 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 55,907,324 - 55,933,944 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 55,906,033 - 55,933,959 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 55,899,940 - 55,926,541 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 55,791,152 - 55,817,745 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 56,180,213 - 56,206,825 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cpt2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405058 | 67,540,611 - 67,558,122 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936522 | 7,856,087 - 7,875,685 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936522 | 7,858,172 - 7,875,679 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CPT2 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 6 | 159,036,422 - 159,061,327 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 159,038,129 - 159,061,327 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 146,702,081 - 146,774,794 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Cpt2 (Heterocephalus glaber - naked mole-rat) |
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