STIP1 (stress induced phosphoprotein 1) - Rat Genome Database

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Gene: STIP1 (stress induced phosphoprotein 1) Chlorocebus sabaeus
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Symbol: STIP1
Name: stress induced phosphoprotein 1
RGD ID: 18515995
Description: ENCODES a protein that exhibits Hsp70 protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); PARTICIPATES IN androgen signaling pathway; chaperone mediated autophagy pathway; cortisol signaling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); high grade glioma (ortholog); intellectual disability (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: stress-induced-phosphoprotein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1110,033,317 - 10,052,406 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666038107,373,392 - 107,395,980 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
STIP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1110,033,317 - 10,052,406 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666038107,373,392 - 107,395,980 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
STIP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381164,185,272 - 64,204,543 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1164,185,272 - 64,204,543 (+)EnsemblGRCh38hg38GRCh38
GRCh371163,952,744 - 63,972,015 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361163,710,163 - 63,728,596 (+)NCBINCBI36Build 36hg18NCBI36
Build 341163,710,247 - 63,728,591NCBI
Celera1161,280,290 - 61,298,770 (+)NCBICelera
Cytogenetic Map11q13.1NCBI
HuRef1160,281,678 - 60,300,086 (+)NCBIHuRef
CHM1_11163,836,600 - 63,855,011 (+)NCBICHM1_1
T2T-CHM13v2.01164,175,217 - 64,194,489 (+)NCBIT2T-CHM13v2.0
Stip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39196,998,064 - 7,017,394 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl196,998,070 - 7,017,335 (-)EnsemblGRCm39 Ensembl
GRCm38197,020,696 - 7,040,026 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl197,020,702 - 7,039,967 (-)EnsemblGRCm38mm10GRCm38
MGSCv37197,095,186 - 7,114,516 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36197,087,751 - 7,106,987 (-)NCBIMGSCv36mm8
Celera196,797,798 - 6,817,128 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map195.15NCBI
Stip1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81213,638,641 - 213,657,654 (-)NCBIGRCr8
mRatBN7.21204,209,433 - 204,228,452 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1204,178,932 - 204,228,476 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1212,559,339 - 212,578,320 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01219,654,692 - 219,673,706 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01212,345,745 - 212,364,758 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01222,274,133 - 222,293,139 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1222,274,133 - 222,293,148 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01229,264,912 - 229,283,915 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41209,693,427 - 209,712,779 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11209,851,856 - 209,871,206 (-)NCBI
Celera1201,742,795 - 201,761,802 (-)NCBICelera
Cytogenetic Map1q43NCBI
Stip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542220,870,325 - 20,886,952 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542220,871,921 - 20,886,952 (-)NCBIChiLan1.0ChiLan1.0
STIP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2965,409,286 - 65,430,806 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11166,456,291 - 66,475,940 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01159,542,760 - 59,560,758 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11162,889,347 - 62,906,902 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1162,889,052 - 62,906,902 (+)Ensemblpanpan1.1panPan2
STIP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11852,854,262 - 52,868,187 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1852,854,663 - 52,868,478 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1851,460,995 - 51,474,926 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01853,899,723 - 53,913,398 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1853,899,384 - 53,913,689 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11853,002,164 - 53,016,120 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01852,577,756 - 52,591,662 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01853,361,854 - 53,375,837 (-)NCBIUU_Cfam_GSD_1.0
Stip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049478,548,518 - 8,563,218 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365994,990,862 - 5,005,582 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365994,990,867 - 5,005,577 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STIP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl27,911,445 - 7,939,005 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.127,911,443 - 7,939,000 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.226,978,503 - 7,040,381 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Stip1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476722,102,477 - 22,118,313 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476722,102,696 - 22,117,809 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_037999153   ⟹   XP_037855081
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666038107,373,392 - 107,395,980 (-)NCBI
Protein Sequences
Protein RefSeqs XP_037855081 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000003200.1
RefSeq Acc Id: XP_037855081   ⟸   XM_037999153
- UniProtKB: A0A0D9R3L1 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000006931 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000004955.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.260.100 UniProtKB/TrEMBL
  Tetratricopeptide repeat domain UniProtKB/TrEMBL
InterPro STI1/HOP_DP UniProtKB/TrEMBL
  STI1_HS-bd UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/TrEMBL
  TPR_2 UniProtKB/TrEMBL
  TPR_repeat UniProtKB/TrEMBL
NCBI Gene STIP1 ENTREZGENE
PANTHER STRESS-INDUCED-PHOSPHOPROTEIN 1 UniProtKB/TrEMBL
  TPR REPEAT CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam STI1 UniProtKB/TrEMBL
  TPR_11 UniProtKB/TrEMBL
  TPR_12 UniProtKB/TrEMBL
  TPR_2 UniProtKB/TrEMBL
  TPR_8 UniProtKB/TrEMBL
PROSITE TPR UniProtKB/TrEMBL
SMART STI1 UniProtKB/TrEMBL
  TPR UniProtKB/TrEMBL
Superfamily-SCOP TPR-like UniProtKB/TrEMBL
UniProt A0A0D9R3L1 ENTREZGENE, UniProtKB/TrEMBL