BMP10 (bone morphogenetic protein 10) - Rat Genome Database

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Gene: BMP10 (bone morphogenetic protein 10) Chlorocebus sabaeus
Analyze
Symbol: BMP10
Name: bone morphogenetic protein 10
RGD ID: 18510565
Description: ENCODES a protein that exhibits cytokine activity (inferred); growth factor activity (inferred); hormone activity (inferred); INVOLVED IN BMP signaling pathway (ortholog); sarcomere organization (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Fibrosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cell surface (inferred); cytoplasm (inferred); extracellular region (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11438,253,093 - 38,260,027 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1438,253,890 - 38,259,621 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604573,717,263 - 73,737,312 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BMP10Green MonkeyLeft Ventricular Hypertrophy  ISOBmp10 (Rattus norvegicus)9068941associated with Hypertension and mRNA:increased expression:heart left ventricleRGDPMID:17921333 and REF_RGD_ID:2302083
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BMP10Green Monkeybladder exstrophy-epispadias-cloacal exstrophy complex  ISOBMP10 (Homo sapiens)8554872ClinVar Annotator: match by term: Bladder exstrophy-epispadias-cloacal exstrophy complexClinVarPMID:25741868
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BMP10Green MonkeyFibrosis  ISOBMP10 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:31712309
BMP10Green Monkeysystolic heart failure  ISOBMP10 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:31712309
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BMP10Green Monkeytetralogy of Fallot  ISOBmp10 (Mus musculus)9068941OMIM:187500MouseDO 


Biological Process
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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BMP10Green Monkeyactivin receptor signaling pathway involved_inIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeyadult heart development involved_inIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
BMP10Green Monkeyatrial cardiac muscle tissue morphogenesis involved_inIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
BMP10Green MonkeyBMP signaling pathway acts_upstream_of_or_withinISOBMP10 (Homo sapiens)9068941 PMID:16049014MGIPMID:16049014
BMP10Green MonkeyBMP signaling pathway involved_inIEAUniProtKB:O95393 more ...150520179 EnsemblGO_REF:0000107
BMP10Green MonkeyBMP signaling pathway involved_inIEAPANTHER:PTN000218366150520179 TreeGrafterGO_REF:0000118
BMP10Green Monkeycardiac muscle cell proliferation involved_inIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
BMP10Green Monkeyheart development acts_upstream_of_or_withinIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
BMP10Green Monkeyheart trabecula formation involved_inIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
BMP10Green Monkeykidney development acts_upstream_of_or_withinIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
BMP10Green Monkeynegative regulation of cardiac muscle hypertrophy involved_inIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
BMP10Green Monkeynegative regulation of cell growth involved_inIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeynegative regulation of cell migration involved_inIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeynegative regulation of endothelial cell migration involved_inIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeypositive regulation of cardiac muscle cell proliferation involved_inIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
BMP10Green Monkeypositive regulation of cardiac muscle hypertrophy involved_inIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeypositive regulation of cartilage development involved_inIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
BMP10Green Monkeypositive regulation of cell proliferation involved in heart morphogenesis involved_inIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
BMP10Green Monkeypositive regulation of DNA-templated transcription involved_inIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeypositive regulation of gene expression acts_upstream_of_or_withinIEAUniProtKB:Q9R229 and ensembl:ENSMUSP00000032125150520179 EnsemblGO_REF:0000107
1 to 20 of 27 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BMP10Green Monkeycell surface located_inIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeycytoplasm located_inIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeyextracellular region located_inIEAInterPro:IPR015615150520179 InterProGO_REF:0000002
BMP10Green Monkeyextracellular region located_inIEAUniProtKB-SubCell:SL-0243150520179 UniProtGO_REF:0000044
BMP10Green Monkeyextracellular region located_inIEAUniProtKB-KW:KW-0964150520179 UniProtGO_REF:0000043
BMP10Green Monkeyextracellular space located_inIEAPANTHER:PTN000218366150520179 TreeGrafterGO_REF:0000118
BMP10Green Monkeyextracellular space located_inIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green MonkeyZ disc located_inIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107

Molecular Function
1 to 11 of 11 rows

  
Object Symbol
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Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
BMP10Green Monkeycytokine activity enablesIEAPANTHER:PTN000218366150520179 TreeGrafterGO_REF:0000118
BMP10Green Monkeygrowth factor activity enablesIEAUniProtKB-KW:KW-0339150520179 UniProtGO_REF:0000043
BMP10Green Monkeygrowth factor activity enablesIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeygrowth factor activity enablesIEAInterPro:IPR001839 and InterPro:IPR017948150520179 InterProGO_REF:0000002
BMP10Green Monkeyhormone activity enablesIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeyprotein binding enablesISOUniProtKB:O152739068941 PMID:17921333BHF-UCLPMID:17921333
BMP10Green Monkeyprotein binding enablesISOUniProtKB:P35555 and UniProtKB:P355569068941 PMID:18339631UniProtPMID:18339631
BMP10Green Monkeyprotein binding enablesISOUniProtKB:J3KQ12 more ...9068941 PMID:32296183IntActPMID:32296183
BMP10Green Monkeyprotein binding enablesISOUniProtKB:P370239068941 PMID:17068149BHF-UCLPMID:17068149
BMP10Green Monkeyreceptor serine/threonine kinase binding enablesIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
BMP10Green Monkeytelethonin binding enablesIEAUniProtKB:O95393 and ensembl:ENSP00000295379150520179 EnsemblGO_REF:0000107
1 to 11 of 11 rows

PMID:22301074   PMID:30032202  



BMP10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11438,253,093 - 38,260,027 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1438,253,890 - 38,259,621 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604573,717,263 - 73,737,312 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
BMP10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38268,860,909 - 68,871,397 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl268,860,909 - 68,871,397 (-)EnsemblGRCh38hg38GRCh38
GRCh37269,088,041 - 69,098,529 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36268,946,117 - 68,952,153 (-)NCBINCBI36Build 36hg18NCBI36
Build 34269,004,263 - 69,010,300NCBI
Celera268,943,104 - 68,949,140 (-)NCBICelera
Cytogenetic Map2p13.3NCBI
HuRef268,828,848 - 68,834,901 (-)NCBIHuRef
CHM1_1269,021,969 - 69,028,022 (-)NCBICHM1_1
T2T-CHM13v2.0268,873,354 - 68,883,842 (-)NCBIT2T-CHM13v2.0
Bmp10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39687,405,976 - 87,411,494 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl687,405,976 - 87,414,659 (+)EnsemblGRCm39 Ensembl
GRCm38687,428,994 - 87,434,512 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl687,428,994 - 87,437,677 (+)EnsemblGRCm38mm10GRCm38
MGSCv37687,378,996 - 87,384,506 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36687,394,674 - 87,400,133 (+)NCBIMGSCv36mm8
Celera689,360,813 - 89,366,323 (+)NCBICelera
Cytogenetic Map6D1NCBI
cM Map637.96NCBI
Bmp10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84121,423,936 - 121,439,094 (+)NCBIGRCr8
mRatBN7.24119,872,066 - 119,877,694 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4119,872,045 - 119,878,627 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4125,343,873 - 125,349,500 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04121,118,641 - 121,124,268 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04119,742,883 - 119,748,510 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04119,224,906 - 119,230,534 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4119,225,040 - 119,230,728 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04183,775,437 - 183,794,686 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44121,596,150 - 121,601,778 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4108,840,882 - 108,846,510 (+)NCBICelera
Cytogenetic Map4q34NCBI
Bmp10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542416,124,464 - 16,134,012 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542416,124,526 - 16,130,723 (+)NCBIChiLan1.0ChiLan1.0
BMP10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21257,534,175 - 57,554,763 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A57,538,123 - 57,558,711 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A68,901,944 - 68,912,559 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A70,023,781 - 70,034,383 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A70,023,655 - 70,034,420 (-)Ensemblpanpan1.1panPan2
BMP10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11067,717,047 - 67,724,778 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1067,717,980 - 67,724,739 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1067,607,020 - 67,614,740 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01068,739,137 - 68,746,855 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1068,739,148 - 68,746,836 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11068,421,138 - 68,428,850 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01068,721,245 - 68,728,968 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01069,017,443 - 69,025,171 (-)NCBIUU_Cfam_GSD_1.0
Bmp10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629215,385,288 - 15,391,206 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649113,180,086 - 13,186,004 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649113,180,086 - 13,186,004 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BMP10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl373,519,934 - 73,529,950 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1373,519,904 - 73,530,448 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2377,125,882 - 77,132,962 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Bmp10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247624,482,674 - 4,493,329 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247624,482,708 - 4,493,295 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in BMP10
139 total Variants



ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
9 9 20 20 20 9 9


RefSeq Transcripts XM_007970391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000013031   ⟹   ENSCSAP00000011044
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1438,253,890 - 38,259,621 (+)Ensembl
RefSeq Acc Id: XM_007970391   ⟹   XP_007968582
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11438,253,093 - 38,260,027 (+)NCBI
Vero_WHO_p1.0NW_02366604573,717,263 - 73,737,312 (-)NCBI
Sequence:
Protein RefSeqs XP_007968582 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000011044.1
RefSeq Acc Id: XP_007968582   ⟸   XM_007970391
- UniProtKB: A0A0D9RR05 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000011044   ⟸   ENSCSAT00000013031



1 to 20 of 20 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCSAG00000014937 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000013031.1 UniProtKB/TrEMBL
Gene3D-CATH 2.10.90.10 UniProtKB/TrEMBL
  2.60.120.970 UniProtKB/TrEMBL
InterPro Cystine-knot_cytokine UniProtKB/TrEMBL
  TGF-b_C UniProtKB/TrEMBL
  TGF-b_propeptide UniProtKB/TrEMBL
  TGF-beta-rel UniProtKB/TrEMBL
  TGFb_CS UniProtKB/TrEMBL
KEGG Report csab:103220117 UniProtKB/TrEMBL
NCBI Gene BMP10 ENTREZGENE
PANTHER BONE MORPHOGENETIC PROTEIN 10 UniProtKB/TrEMBL
  PTHR11848 UniProtKB/TrEMBL
Pfam TGF_beta UniProtKB/TrEMBL
  TGFb_propeptide UniProtKB/TrEMBL
PROSITE TGF_BETA_1 UniProtKB/TrEMBL
  TGF_BETA_2 UniProtKB/TrEMBL
SMART TGFB UniProtKB/TrEMBL
Superfamily-SCOP SSF57501 UniProtKB/TrEMBL
UniProt A0A0D9RR05 ENTREZGENE, UniProtKB/TrEMBL
1 to 20 of 20 rows