Symbol:
TNP1
Name:
transition protein 1
RGD ID:
18497474
Description:
ENCODES a protein that exhibits DNA binding (inferred); INVOLVED IN cell differentiation (inferred); chromatin remodeling (inferred); flagellated sperm motility (inferred); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN male germ cell nucleus (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
spermatid nuclear transition protein 1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 10 102,703,116 - 102,703,747 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 10 102,703,325 - 102,703,691 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666040 96,709,921 - 96,711,971 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
TNP1 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 10 102,703,116 - 102,703,747 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 10 102,703,325 - 102,703,691 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666040 96,709,921 - 96,711,971 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
TNP1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 2 216,859,458 - 216,860,064 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 2 216,859,458 - 216,860,064 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 2 217,724,181 - 217,724,787 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 2 217,432,426 - 217,433,027 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 2 217,549,689 - 217,550,288 NCBI Celera 2 211,492,069 - 211,492,670 (-) NCBI Celera Cytogenetic Map 2 q35 NCBI HuRef 2 209,578,223 - 209,578,824 (-) NCBI HuRef CHM1_1 2 217,730,235 - 217,730,836 (-) NCBI CHM1_1 T2T-CHM13v2.0 2 217,341,898 - 217,342,504 (-) NCBI T2T-CHM13v2.0
Tnp1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 1 73,054,233 - 73,055,058 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 1 73,054,233 - 73,055,068 (-) Ensembl GRCm39 Ensembl GRCm38 1 73,015,074 - 73,015,899 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 1 73,015,074 - 73,015,909 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 1 73,061,648 - 73,062,473 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 1 72,948,284 - 72,949,079 (-) NCBI MGSCv36 mm8 Celera 1 73,589,038 - 73,589,863 (-) NCBI Celera Cytogenetic Map 1 C3 NCBI cM Map 1 36.94 NCBI
Tnp1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 9 82,043,669 - 82,044,278 (-) NCBI GRCr8 mRatBN7.2 9 74,594,463 - 74,595,072 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 9 74,594,466 - 74,595,274 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 9 83,049,184 - 83,049,793 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 9 88,178,079 - 88,178,688 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 9 86,564,825 - 86,565,434 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 9 80,294,837 - 80,295,446 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 9 80,294,840 - 80,295,446 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 9 80,066,299 - 80,066,908 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 9 72,397,750 - 72,398,359 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 9 72,544,732 - 72,545,341 (-) NCBI Celera 9 72,188,091 - 72,188,700 (-) NCBI Celera Cytogenetic Map 9 q33 NCBI
Tnp1 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955453 16,387,527 - 16,388,890 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955453 16,387,897 - 16,388,513 (+) NCBI ChiLan1.0 ChiLan1.0
TNP1 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 13 119,489,569 - 119,490,175 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 2B 119,504,535 - 119,505,141 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 2B 104,122,748 - 104,123,349 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 2B 222,723,606 - 222,724,212 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 2B 222,723,606 - 222,724,212 (-) Ensembl panpan1.1 panPan2
TNP1
Tnp1
TNP1 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 15 119,037,496 - 119,038,105 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 15 119,037,492 - 119,038,099 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 15 131,800,371 - 131,801,028 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
Tnp1
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCSAT00000007092 ⟹ ENSCSAP00000005278
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 Ensembl 10 102,703,325 - 102,703,691 (-) Ensembl
RefSeq Acc Id:
XM_038001550 ⟹ XP_037857478
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source Vero_WHO_p1.0 NW_023666040 96,709,921 - 96,711,971 (+) NCBI
Ensembl Acc Id:
ENSCSAP00000005278 ⟸ ENSCSAT00000007092
RefSeq Acc Id:
XP_037857478 ⟸ XM_038001550
