PAK3 (p21 (RAC1) activated kinase 3) - Rat Genome Database

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Gene: PAK3 (p21 (RAC1) activated kinase 3) Chlorocebus sabaeus
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Symbol: PAK3
Name: p21 (RAC1) activated kinase 3
RGD ID: 18494200
Description: ENCODES a protein that exhibits GTPase binding (ortholog); MAP kinase kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN axonogenesis (ortholog); cellular response to organic cyclic compound (ortholog); dendrite development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); developmental and epileptic encephalopathy 36 (ortholog); genetic disease (ortholog); FOUND IN endosome (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serine/threonine-protein kinase PAK 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X98,743,525 - 99,031,056 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX98,911,447 - 99,027,769 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606524,135,627 - 24,263,134 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PAK3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X98,743,525 - 99,031,056 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX98,911,447 - 99,027,769 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606524,135,627 - 24,263,134 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
PAK3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X110,944,397 - 111,227,361 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX110,944,285 - 111,227,361 (+)EnsemblGRCh38hg38GRCh38
GRCh37X110,187,625 - 110,470,589 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X110,226,256 - 110,350,816 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X110,145,744 - 110,270,305NCBI
CeleraX110,667,132 - 110,943,790 (+)NCBICelera
Cytogenetic MapXq23NCBI
HuRefX99,807,691 - 100,086,683 (+)NCBIHuRef
CHM1_1X110,098,857 - 110,375,673 (+)NCBICHM1_1
T2T-CHM13v2.0X109,392,559 - 109,675,560 (+)NCBIT2T-CHM13v2.0
Pak3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X142,301,370 - 142,580,792 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX142,301,587 - 142,580,792 (+)EnsemblGRCm39 Ensembl
GRCm38X143,518,366 - 143,797,796 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX143,518,591 - 143,797,796 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X140,127,830 - 140,226,347 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X138,912,113 - 139,038,179 (+)NCBIMGSCv36mm8
CeleraX127,648,772 - 127,747,962 (+)NCBICelera
Cytogenetic MapXF2NCBI
cM MapX64.5NCBI
Pak3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X111,912,967 - 112,171,037 (+)NCBIGRCr8
mRatBN7.2X107,116,308 - 107,374,342 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX107,260,898 - 107,368,314 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX109,398,307 - 109,506,166 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X112,897,991 - 113,005,870 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X110,452,018 - 110,559,437 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X114,784,452 - 115,042,683 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX114,929,029 - 115,036,669 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X113,227,320 - 113,495,881 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X34,734,814 - 34,842,093 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X34,788,282 - 34,895,562 (-)NCBI
CeleraX106,660,352 - 106,767,478 (+)NCBICelera
Cytogenetic MapXq33NCBI
Pak3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554904,545,457 - 4,662,862 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554904,538,933 - 4,833,851 (-)NCBIChiLan1.0ChiLan1.0
PAK3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X110,434,847 - 110,720,349 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X110,438,452 - 110,723,954 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X100,060,647 - 100,345,491 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X110,672,659 - 110,804,815 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX110,672,664 - 110,797,992 (+)Ensemblpanpan1.1panPan2
PAK3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X84,074,146 - 84,335,699 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX84,074,001 - 84,329,951 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX70,164,167 - 70,430,936 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X85,871,706 - 85,997,455 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1X83,206,488 - 83,474,638 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X84,896,488 - 85,157,976 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X84,724,769 - 84,986,483 (+)NCBIUU_Cfam_GSD_1.0
Pak3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X83,329,189 - 83,584,851 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364994,079,103 - 4,188,774 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364994,079,127 - 4,328,580 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PAK3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX90,942,077 - 91,238,565 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X90,941,976 - 91,244,331 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Pak3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248034,392,511 - 4,513,101 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248034,386,035 - 4,700,450 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 20 60
Low 16 18
Below cutoff 2

Sequence


RefSeq Acc Id: ENSCSAT00000006870   ⟹   ENSCSAP00000005065
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 EnsemblX98,911,447 - 99,027,769 (+)Ensembl
RefSeq Acc Id: XM_007992574   ⟹   XP_007990765
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1X98,911,594 - 99,031,056 (+)NCBI
Vero_WHO_p1.0NW_02366606524,135,627 - 24,263,134 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007990765 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000005065.1
RefSeq Acc Id: XP_007990765   ⟸   XM_007992574
- UniProtKB: A0A0D9R8X6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000005065   ⟸   ENSCSAT00000006870


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000008810 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000006870.1 UniProtKB/TrEMBL
Gene3D-CATH 3.90.810.10 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro CRIB_dom UniProtKB/TrEMBL
  CRIB_dom_sf UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  PAK_BD UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
  STK_PAK3 UniProtKB/TrEMBL
KEGG Report csab:103232488 UniProtKB/TrEMBL
NCBI Gene PAK3 ENTREZGENE
PANTHER SERINE/THREONINE-PROTEIN KINASE PAK 3 UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE TAO UniProtKB/TrEMBL
Pfam PBD UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
PROSITE CRIB UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART PBD UniProtKB/TrEMBL
  S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A0D9R8X6 ENTREZGENE, UniProtKB/TrEMBL