ACRBP (acrosin binding protein) - Rat Genome Database

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Gene: ACRBP (acrosin binding protein) Chlorocebus sabaeus
Analyze
Symbol: ACRBP
Name: acrosin binding protein
RGD ID: 18482467
Description: INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); genetic disease (ortholog); Hyperphosphatemic Familial Tumoral Calcinosis 1 (ortholog); FOUND IN acrosomal membrane (ortholog); extracellular region (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: acrosin-binding protein; LOC103218465
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1116,672,093 - 6,681,493 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl116,672,312 - 6,681,198 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660631,544,427 - 1,553,723 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ACRBP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1116,672,093 - 6,681,493 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl116,672,312 - 6,681,198 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660631,544,427 - 1,553,723 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ACRBP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38126,638,075 - 6,647,432 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl126,638,075 - 6,647,433 (-)EnsemblGRCh38hg38GRCh38
GRCh37126,747,241 - 6,756,598 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,617,503 - 6,626,841 (-)NCBINCBI36Build 36hg18NCBI36
Build 34126,617,502 - 6,626,841NCBI
Celera128,364,217 - 8,373,557 (-)NCBICelera
Cytogenetic Map12p13.31NCBI
HuRef126,600,543 - 6,609,883 (-)NCBIHuRef
CHM1_1126,746,238 - 6,755,578 (-)NCBICHM1_1
T2T-CHM13v2.0126,648,439 - 6,657,798 (-)NCBIT2T-CHM13v2.0
Acrbp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396125,026,890 - 125,040,228 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6125,026,652 - 125,040,230 (+)EnsemblGRCm39 Ensembl
GRCm386125,049,927 - 125,063,265 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6125,049,689 - 125,063,267 (+)EnsemblGRCm38mm10GRCm38
MGSCv376124,999,945 - 125,013,283 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366125,015,594 - 125,028,862 (+)NCBIMGSCv36mm8
Celera6126,719,643 - 126,732,965 (+)NCBICelera
Cytogenetic Map6F2NCBI
cM Map659.17NCBI
Acrbp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84159,537,395 - 159,550,454 (+)NCBIGRCr8
mRatBN7.24157,851,149 - 157,864,211 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4157,841,841 - 157,864,213 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4164,080,193 - 164,093,324 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04159,863,111 - 159,876,242 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04158,499,403 - 158,512,518 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04157,563,990 - 157,577,045 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4157,563,990 - 157,568,023 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04224,581,291 - 224,594,883 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44161,170,240 - 161,174,274 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4146,588,107 - 146,592,141 (+)NCBICelera
Cytogenetic Map4q42NCBI
Acrbp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554134,251,608 - 4,262,095 (-)NCBIChiLan1.0ChiLan1.0
ACRBP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21012,199,893 - 12,210,628 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11212,196,651 - 12,207,398 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0126,768,971 - 6,778,613 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1126,685,963 - 6,695,344 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl126,685,963 - 6,695,344 (-)Ensemblpanpan1.1panPan2
ACRBP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12738,380,244 - 38,388,502 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2738,380,363 - 38,388,496 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha278,227,951 - 8,236,209 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02738,736,524 - 38,743,234 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2738,734,870 - 38,743,228 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12738,607,051 - 38,615,309 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02738,648,579 - 38,656,840 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0277,706,633 - 7,715,103 (-)NCBIUU_Cfam_GSD_1.0
Acrbp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945102,480,845 - 102,490,190 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049367091,148,454 - 1,158,069 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACRBP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl564,037,095 - 64,047,847 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1564,036,810 - 64,047,846 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2566,530,446 - 66,541,094 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Acrbp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248603,338,690 - 3,352,396 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248603,338,478 - 3,353,373 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium
Low 8 16 7
Below cutoff 28 4 52

Sequence


Reference Sequences
RefSeq Acc Id: ENSCSAT00000008498   ⟹   ENSCSAP00000006645
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl116,672,312 - 6,681,198 (-)Ensembl
RefSeq Acc Id: XM_007967367   ⟹   XP_007965558
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1116,672,093 - 6,681,490 (-)NCBI
Vero_WHO_p1.0NW_0236660631,544,427 - 1,553,723 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007965558 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000006645.1
Reference Protein Sequences
RefSeq Acc Id: XP_007965558   ⟸   XM_007967367
- UniProtKB: A0A0D9RDF6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000006645   ⟸   ENSCSAT00000008498


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000010413 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000008498.1 UniProtKB/TrEMBL
InterPro Kazal_dom_sf UniProtKB/TrEMBL
  Proacrosin-bd UniProtKB/TrEMBL
NCBI Gene ACRBP ENTREZGENE
PANTHER ACROSIN-BINDING PROTEIN UniProtKB/TrEMBL
  PTHR21362 UniProtKB/TrEMBL
Pfam PBP_sp32 UniProtKB/TrEMBL
Superfamily-SCOP SSF100895 UniProtKB/TrEMBL
UniProt A0A0D9RDF6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-09 ACRBP  acrosin binding protein  LOC103218465  acrosin binding protein  Symbol and/or name change 5135510 APPROVED
2020-12-08 LOC103218465  acrosin binding protein  ACRBP  acrosin binding protein  Symbol and/or name change 5135510 APPROVED