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Gene: C16H17orf100 (chromosome 16 C17orf100 homolog) Chlorocebus sabaeus

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Symbol:

C16H17orf100

Name:

chromosome 16 C17orf100 homolog

RGD ID:

18448301

Description:

ASSOCIATED WITH congenital myasthenic syndrome 2A (ortholog); developmental and epileptic encephalopathy 25 (ortholog); Leber congenital amaurosis 4 (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

arachidonate 15-lipoxygenase-like; chromosome 16 open reading frame, human C17orf100; chromosome unknown C17orf100 homolog; CUNH17orf100; LOC103242255; LOC103242256; uncharacterized LOC103242256; uncharacterized protein C17orf100 homolog; uncharacterized protein LOC103242256

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	6,033,819 - 6,036,649 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666059	15,403,189 - 15,413,644 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
C16H17orf100	Green Monkey	congenital myasthenic syndrome 2A		ISO	RGD:2299982	8554872	ClinVar Annotator: match by term: Congenital myasthenic syndrome 2A	ClinVar	PMID:28492532
C16H17orf100	Green Monkey	developmental and epileptic encephalopathy 25		ISO	RGD:2299982	8554872	ClinVar Annotator: match by term: Developmental and epileptic encephalopathy, 25	ClinVar	PMID:10615133\|PMID:15249368\|PMID:15347646\|PMID:28492532
C16H17orf100	Green Monkey	Leber congenital amaurosis 4		ISO	RGD:2299982	8554872	ClinVar Annotator: match by term: Leber congenital amaurosis 4	ClinVar	PMID:10615133\|PMID:15249368\|PMID:15347646\|PMID:28492532
C16H17orf100	Green Monkey	very long chain acyl-CoA dehydrogenase deficiency		ISO	RGD:2299982	8554872	ClinVar Annotator: match by term: Very long chain acyl-CoA dehydrogenase deficiency	ClinVar	PMID:28492532

PMID:22301074

C16H17orf100
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	6,033,819 - 6,036,649 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666059	15,403,189 - 15,413,644 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

C17orf100
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	6,651,762 - 6,653,476 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	6,651,762 - 6,693,202 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	6,555,082 - 6,556,795 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	6,495,783 - 6,497,341 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	6,576,124 - 6,577,683 (+)	NCBI		Celera
Cytogenetic Map	17	p13.1	NCBI
HuRef	17	6,450,343 - 6,451,907 (+)	NCBI		HuRef
CHM1_1	17	6,565,345 - 6,566,909 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	6,552,391 - 6,554,105 (+)	NCBI		T2T-CHM13v2.0

4930563E22Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	72,105,964 - 72,109,276 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	72,105,964 - 72,109,270 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	72,215,138 - 72,218,450 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	72,215,138 - 72,218,444 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	72,028,640 - 72,031,952 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	72,031,333 - 72,034,645 (+)	NCBI		MGSCv36	mm8
Celera	11	79,741,636 - 79,744,941 (+)	NCBI		Celera
Cytogenetic Map	11	B4	NCBI
cM Map	11	43.93	NCBI

C10h17orf100
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	57,339,186 - 57,342,233 (+)	NCBI		GRCr8
mRatBN7.2	10	56,840,451 - 56,843,674 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	56,832,412 - 56,843,871 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	10	58,784,444 - 58,787,713 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	58,784,660 - 58,785,043 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	58,525,065 - 58,528,124 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	59,107,710 - 59,108,313 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	55,970,332 - 55,973,601 (+)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

CUNH17orf100
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955467	12,155,309 - 12,158,762 (+)	NCBI	ChiLan1.0	ChiLan1.0

C19H17orf100
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	14,251,645 - 14,262,831 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	16,217,982 - 16,228,101 (+)	NCBI		NHGRI_mPanPan1

CUNH17orf100
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	54,555,549 - 54,559,438 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936677	1,341,570 - 1,345,349 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C12H17orf100
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	12	50,644,783 - 50,728,768 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	52,709,611 - 52,727,624 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CUNH17orf100
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624786	7,380,691 - 7,388,513 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in C16H17orf100
46 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_008010051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008010053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073004648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073004649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073004650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073004651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073004652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073004653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073004654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005236736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005236737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005236738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_500720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JBLKOC010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_008010051 ⟹ XP_008008242

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	16	6,033,819 - 6,036,649 (+)	NCBI
Vero_WHO_p1.0	NW_023666059	15,403,189 - 15,406,812 (-)	NCBI

Sequence:

show sequence

TGGTGTCAAGGGGGCATGGTTGGTGGGGTTGGAAGGACCAAGAGCTCAGATCCCACAACTTGCTAAACAACTGCCTTCCCCAGAGCGCGTGCAGGACTCCTGGAAGGAAGATGCCTTATTTGGGTACC
AGTTTCTTAATGGCGCCAACCCCATGGTGCTGAGGCGCTCTGCTCACCTTCCTGCCCGCCTTGTGTTCCCTCCAGGCATGGAGGAACTGCAGGCCCAGCTGGAGAAGGAGCTAAAGGGAGGCACACTG
TTTGAAGCTGACTTCTCCCTGCTGGATGGGATCAAGGCCAACATTATTCTCTGTAGCCAGCAGCACATGGCTGCCCCTCTGGTCATGCTGAAACTGCAACCTGATGGGAAACTCTTGCCCATGGTCAT
CCAGGGACTGAAAGGGGAAGTGGAGGCTGGAGGAGGCACCAGAAGAGCAGTTTCTGCAGAATGCTGGAGGCAAAGCAGCTTGCAGGGTGCTAATGCACCGAGCGGATCTTCCAATGGTCTGGCTTCTA
GCCAGATGCTGGGTCCTCAGCTCTGGCTTCCAGCTCCATGAGCTGCAGTCTCATCTTCTGAGGGGATGCTTGATGGCTGAGGTCATTGCTGTGGCCACCATGAGGTGCCTGCCATCGATACATCCTAT
CTTCAAGGTAACACCTTATCCCCTTCTCTCCTGTATTCAGCTGAATACTTGATTTCTCTAGAGTTCTCTTTCTGTACAACACCCTCAATTTCAGCATACTGCCCTGTGTATTCTGGCTGTACTGGCCT

hide sequence

RefSeq Acc Id:

XM_008010053 ⟹ XP_008008244

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666059	15,411,848 - 15,413,644 (-)	NCBI

Sequence:

show sequence

AGGGGCAGGAGCCCAGTGTTTTTAGCCTTCGAAGGACCATGGTGTTTCCACGTCATCGTGTTGTGGCGCTCCCGGCTCTGGCAGTACCGTAGTTTTCCTCTCTTCTGCCTGCGGTGACCGTTGGGCTG
GGGGGTGCCCCGAGGCCTCCCTGGCCCCCTCACGCCGGCAGAATGGCCTCAGCCCGAGGGGCCAAGCAGTCTTCTCCCCGGGTGGGGACCACCCGCTACACAGAGACGTCCACAGTCCGCGTGGAGAC
CTCGTCCCACCGTGTGGAGACCTCGTCCCACCGCGTGGAGACGTCGTCCCGGCGGGTGGAGACCTCCCAGCGCCGCAGCGAGGGGCCCTCCCTCTCCCCCTTGGGGAAGCGGCTCCCTGGCATCCTCG
AGGCGTCCTCCCGGCACGTGGAATCCTCCTCGCAGCGCACGGAAACGACCTCCCGCCACATCAGGGCCTCGTCCCTGAGGGTGGAGACGGCTCTGCACTTCGCGGAGAGCCCAGCCCCGCGGGCCAAG
CCGGCCGCCCGCCAGAACGAAAAACCGGCCCGATGAGATGCTGCTTCCCAAAGGCCACCAAGGGGCCAGGGCCCTCAGCCAGGACAGAAAGGCCTCCAGTTGCCAGCCAGCCAGCCAGCTGCCAGGTG
GACCAATCATTTTCGGTTTCATGGAAACAAACCATAAATCAATGTAAGAAACAGCCAAGCCGCAGTTTCTGAACACAGCCAACGTTTATTGACCATCCGGCGTCTTGGACCAGCCTACTTTTGACCCA
GTGAACTATTTTCACTTGAAGCCAGCACAAAAGATTTTCATGCCCAGGATGCTGTCTAAACCGGCTTGATGGACAAAGAGGCTGTTTGAGCCTCTGAGCCAGGTGAGTTTGGGATCCACAGCCCTCCG
AAGACCTTCACCCCTTAGGAACAGAGACCAAACTGAAATCATGACCTGTGGAATGATTCCATGCCTGCTAGCAACTTGAGGGGCAAGGAACAGACTCATAAAACATTAATGGCCTTTGTTTATGTTTC
AAAGTAA

hide sequence

RefSeq Acc Id:

XR_005236736

Type:

NON-CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666059	15,406,913 - 15,413,584 (-)	NCBI

RefSeq Acc Id:

XR_005236737

Type:

NON-CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666059	15,403,189 - 15,413,584 (-)	NCBI

RefSeq Acc Id:

XR_005236738

Type:

NON-CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666059	15,403,189 - 15,413,584 (-)	NCBI

RefSeq Acc Id:

XR_500720

Type:

NON-CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666059	15,406,913 - 15,413,584 (-)	NCBI

Sequence:

show sequence

CTGGCCCCCTCACGCCGGCAGAATGGCCTCAGCCCGAGGGGCCAAGCAGTCTTCTCCCCGGGTG
GGGACCACCCGCTACACAGAGACGTCCACAGTCCGCGTGGAGACCTCGTCCCACCGTGTGGAGACCTCGTCCCACCGCGTGGAGACGTCGTCCCGGCGGGTGGAGACCTCCCAGCGCCGCAGCGAGGG
GCCCTCCCTCTCCCCCTTGGGGAAGCGGCTCCCTGGCATCCTCGAGGCGTCCTCCCGGCACGTGGAATCCTCCTCGCAGCGCACGGAAACGACCTCCCGCCACATCAGGGCCTCGTCCCTGAGGGTGG
AGACGGCTCTGCACTTCGCGGAGAGCCCAGCCCCGCGGGCCAAGCCGGCCGCCCGCCAGAACGAAAAACCGGCCCGATGAGATGCTGCTTCCCAAAGGCCACCAAGGGGCCAGGGCCCTCAGCCAGGA
CAGAAAGGCCTCCAGTTGCCAGCCAGCCAGCCAGCTGCCAGGTGGACCAATCATTTTCGGTTTCATGGAAACAAACCATAAATCAATGTAAGAAACAGCCAAGCCGCAGTTTCTGAACACAGCCAACG
TTTATTGACCATCCGGCGTCTTGGACCAGCCTACTTTTGACCCAGTGAACTATTTTCACTTGAAGCCAGCACAAAAGATTTTCATGCCCAGGATGCTGTCTAAACCGGCTTGATGGACAAAGAGGCTG
TTTGAGCCTCTGAGCCAGGAGA

hide sequence


Protein RefSeqs	XP_072860749	(Get FASTA)	NCBI Sequence Viewer
	XP_072860750	(Get FASTA)	NCBI Sequence Viewer
	XP_072860751	(Get FASTA)	NCBI Sequence Viewer
	XP_072860752	(Get FASTA)	NCBI Sequence Viewer
	XP_072860753	(Get FASTA)	NCBI Sequence Viewer
	XP_072860754	(Get FASTA)	NCBI Sequence Viewer
	XP_072860755	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_008008242 ⟸ XM_008010051
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_008008244 ⟸ XM_008010053
- Peptide Label:	isoform X2

Database	Acc Id	Source(s)
NCBI Gene	LOC103242255	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2025-04-15	C16H17orf100	chromosome 16 C17orf100 homolog	CUNH17orf100	chromosome unknown C17orf100 homolog	Symbol and/or name change	5135510	APPROVED
2020-12-08	CUNH17orf100	chromosome unknown C17orf100 homolog	LOC103242255	arachidonate 15-lipoxygenase-like	Symbol and/or name change	5135510	APPROVED
2020-12-03	LOC103242255	arachidonate 15-lipoxygenase-like	C16H17orf100	chromosome 16 open reading frame, human C17orf100	Data merged from RGD:18763673	737654	PROVISIONAL
2020-12-03	LOC103242255	arachidonate 15-lipoxygenase-like	LOC103242256	uncharacterized LOC103242256	Data merged from RGD:18523046	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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