AIRE (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 2 | 88,019,122 - 88,031,998 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 88,019,522 - 88,031,801 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666054 | 16,133,673 - 16,147,350 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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AIRE (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 21 | 44,285,876 - 44,298,648 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 21 | 44,285,838 - 44,298,648 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 21 | 45,705,759 - 45,718,531 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 21 | 44,530,191 - 44,542,530 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 21 | 44,534,575 - 44,542,300 | NCBI | | | | | Celera | 21 | 30,811,017 - 30,823,364 (+) | NCBI | | Celera | | | Cytogenetic Map | 21 | q22.3 | NCBI | | | | | HuRef | 21 | 31,076,211 - 31,088,675 (+) | NCBI | | HuRef | | | CHM1_1 | 21 | 45,266,544 - 45,278,925 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 21 | 42,639,932 - 42,652,704 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Aire (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 10 | 77,865,856 - 77,879,444 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 77,865,856 - 77,879,444 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 78,030,022 - 78,043,610 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 78,030,022 - 78,043,610 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 77,492,776 - 77,506,325 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 77,433,160 - 77,446,709 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 79,069,034 - 79,082,580 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | C1 | NCBI | | | | | cM Map | 10 | 39.72 | NCBI | | | | |
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Aire (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 20 | 10,635,775 - 10,650,709 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 20 | 10,636,058 - 10,651,060 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 20 | 10,636,123 - 10,651,060 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 20 | 11,335,440 - 11,350,201 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 20 | 10,696,343 - 10,711,104 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 20 | 11,168,390 - 11,183,326 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 20 | 11,365,630 - 11,380,636 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 20 | 11,365,697 - 11,380,631 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 20 | 13,535,776 - 13,550,486 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 20 | 10,980,031 - 10,996,102 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 20 | 10,980,315 - 10,996,140 (+) | NCBI | | | | | Celera | 20 | 12,141,888 - 12,156,863 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | p12 | NCBI | | | | |
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Aire (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955407 | 41,157,484 - 41,165,014 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955407 | 41,157,503 - 41,165,032 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AIRE (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 22 | 40,293,363 - 40,306,567 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 21 | 35,143,474 - 35,157,937 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 21 | 30,543,018 - 30,556,225 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 21 | 43,837,170 - 43,849,830 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 21 | 43,837,340 - 43,848,974 (+) | Ensembl | panpan1.1 | | panPan2 | |
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AIRE (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 31 | 38,139,513 - 38,149,294 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 31 | 38,139,099 - 38,149,296 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 31 | 37,296,701 - 37,307,469 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 31 | 37,686,832 - 37,697,601 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 31 | 37,686,636 - 37,696,584 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 31 | 37,553,994 - 37,564,750 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 31 | 37,534,760 - 37,545,522 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 31 | 38,032,729 - 38,043,507 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Aire (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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AIRE (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 207,148,401 - 207,158,346 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 207,148,401 - 207,158,355 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 217,028,220 - 217,038,176 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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Aire (Heterocephalus glaber - naked mole-rat) |
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