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Gene: FANCL (FA complementation group L) Chlorocebus sabaeus

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Symbol:

FANCL

Name:

FA complementation group L

RGD ID:

18420700

Description:

ENCODES a protein that exhibits ubiquitin protein ligase activity (inferred); ubiquitin protein ligase binding (inferred); ubiquitin-protein transferase activity (inferred); INVOLVED IN gamete generation (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); Fanconi anemia (ortholog); Fanconi anemia complementation group A (ortholog); FOUND IN nuclear envelope (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

E3 ubiquitin-protein ligase FANCL; Fanconi anemia complementation group L

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	48,725,447 - 48,803,892 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	48,725,541 - 48,805,356 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	62,939,983 - 63,017,950 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FANCL	Green Monkey	tongue squamous cell carcinoma		ISO	FANCL (Homo sapiens)	9068941		RGD	PMID:17409780 and REF_RGD_ID:11049143

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FANCL	Green Monkey	Fanconi anemia		ISO	FANCL (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16199547 more ...
FANCL	Green Monkey	Fanconi anemia		ISO	FANCL (Homo sapiens)	8554872	ClinVar Annotator: match by term: Fanconi anemia	ClinVar	PMID:12973351 more ...
FANCL	Green Monkey	Fanconi anemia		ISO	FANCL (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:12973351 more ...
FANCL	Green Monkey	Fanconi anemia		ISO	FANCL (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:12973351 more ...
FANCL	Green Monkey	Fanconi anemia		ISO	FANCL (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16199547 more ...
FANCL	Green Monkey	Fanconi anemia complementation group A		ISO	FANCL (Homo sapiens)	8554872	ClinVar Annotator: match by term: Fanconi anemia complementation group A	ClinVar	PMID:17576681 more ...
FANCL	Green Monkey	Fanconi anemia complementation group L		ISO	FANCL (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:12973351 more ...
FANCL	Green Monkey	genetic disease		ISO	FANCL (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 and PMID:28492532
FANCL	Green Monkey	premature menopause		ISO	FANCL (Homo sapiens)	8554872	ClinVar Annotator: match by term: Premature menopause	ClinVar	PMID:19405097 more ...
FANCL	Green Monkey	primary ovarian insufficiency		ISO	FANCL (Homo sapiens)	8554872	ClinVar Annotator: match by term: Premature ovarian insufficiency	ClinVar	PMID:19405097 more ...
FANCL	Green Monkey	VACTERL association		ISO	FANCL (Homo sapiens)	8554872	ClinVar Annotator: match by term: VATER association	ClinVar	PMID:19405097 more ...
FANCL	Green Monkey	X-linked VACTERL association		ISO	FANCL (Homo sapiens)	8554872	ClinVar Annotator: match by term: VACTERL association more ...	ClinVar	PMID:19405097 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FANCL	Green Monkey	46 XX gonadal dysgenesis		ISO	Fancl (Mus musculus)	9068941	OMIM:233300 more ...	MouseDO

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FANCL	Green Monkey	Fanconi anemia complementation group L		ISO	FANCL (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FANCL	Green Monkey	DNA damage response	involved_in	IEA	UniProtKB:Q9NW38 and ensembl:ENSP00000233741	150520179		Ensembl	GO_REF:0000107
FANCL	Green Monkey	DNA repair	involved_in	IEA	UniProtKB:Q9NW38 and ensembl:ENSP00000233741	150520179		Ensembl	GO_REF:0000107
FANCL	Green Monkey	DNA repair	involved_in	IEA	PANTHER:PTN000324803	150520179		TreeGrafter	GO_REF:0000118
FANCL	Green Monkey	gamete generation	acts_upstream_of_or_within	ISO	MGI:1861640	9068941	PMID:12417526	MGI	PMID:12417526
FANCL	Green Monkey	interstrand cross-link repair	involved_in	IEA	InterPro:IPR026848	150520179		InterPro	GO_REF:0000002
FANCL	Green Monkey	protein monoubiquitination	involved_in	IEA	UniProtKB:Q9NW38 and ensembl:ENSP00000233741	150520179		Ensembl	GO_REF:0000107
FANCL	Green Monkey	protein monoubiquitination	involved_in	IEA	PANTHER:PTN000324803	150520179		TreeGrafter	GO_REF:0000118
FANCL	Green Monkey	regulation of cell population proliferation	acts_upstream_of_or_within	ISO	MGI:1861640	9068941	PMID:12417526	MGI	PMID:12417526

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FANCL	Green Monkey	chromatin	located_in	IEA	UniProtKB:Q9NW38 and ensembl:ENSP00000233741	150520179		Ensembl	GO_REF:0000107
FANCL	Green Monkey	Fanconi anaemia nuclear complex	part_of	IEA	InterPro:IPR026848	150520179		InterPro	GO_REF:0000002
FANCL	Green Monkey	Fanconi anaemia nuclear complex	part_of	IEA	UniProtKB:Q9NW38 and ensembl:ENSP00000233741	150520179		Ensembl	GO_REF:0000107
FANCL	Green Monkey	intracellular membrane-bounded organelle	located_in	IEA	UniProtKB:Q9NW38 and ensembl:ENSP00000233741	150520179		Ensembl	GO_REF:0000107
FANCL	Green Monkey	nuclear body	located_in	IEA	UniProtKB:Q9NW38 and ensembl:ENSP00000233741	150520179		Ensembl	GO_REF:0000107
FANCL	Green Monkey	nuclear envelope	located_in	ISO	PR:Q80WJ1	9068941	PMID:12574169	MGI	PMID:12574169
FANCL	Green Monkey	nucleus	located_in	IEA	PANTHER:PTN000324803	150520179		TreeGrafter	GO_REF:0000118

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
FANCL	Green Monkey	protein binding	enables	ISO	UniProtKB:Q9NPD8	9068941	PMID:24389026	IntAct	PMID:24389026
FANCL	Green Monkey	protein binding	enables	ISO	PR:Q80WJ1	9068941	PMID:12574169 and PMID:23451117	MGI	PMID:12574169 and PMID:23451117
FANCL	Green Monkey	protein binding	enables	ISO	UniProtKB:P28799 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
FANCL	Green Monkey	protein binding	enables	ISO	UniProtKB:A2RRN7 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
FANCL	Green Monkey	protein binding	enables	ISO	UniProtKB:Q8VDW4	9068941	PMID:21229326	UniProt	PMID:21229326
FANCL	Green Monkey	ubiquitin protein ligase activity	enables	IEA	UniProtKB:Q9NW38 and ensembl:ENSP00000233741	150520179		Ensembl	GO_REF:0000107
FANCL	Green Monkey	ubiquitin protein ligase activity	enables	IEA	PANTHER:PTN000324803	150520179		TreeGrafter	GO_REF:0000118
FANCL	Green Monkey	ubiquitin protein ligase activity	enables	IEA	ARBA:ARBA00028366	150520179		UniProt	GO_REF:0000117
FANCL	Green Monkey	ubiquitin protein ligase binding	enables	IEA	UniProtKB:Q9NW38 and ensembl:ENSP00000233741	150520179		Ensembl	GO_REF:0000107
FANCL	Green Monkey	ubiquitin-protein transferase activity	enables	IEA	UniProtKB:Q9NW38 and ensembl:ENSP00000233741	150520179		Ensembl	GO_REF:0000107
FANCL	Green Monkey	ubiquitin-protein transferase activity	enables	IEA	InterPro:IPR026848	150520179		InterPro	GO_REF:0000002

PMID:30032202

FANCL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	48,725,447 - 48,803,892 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	48,725,541 - 48,805,356 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	62,939,983 - 63,017,950 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

FANCL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	58,159,243 - 58,241,380 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	58,159,243 - 58,241,410 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	58,386,382 - 58,468,460 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	58,239,882 - 58,322,018 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	58,298,030 - 58,380,165	NCBI
Celera	2	58,229,548 - 58,311,691 (-)	NCBI		Celera
Cytogenetic Map	2	p16.1	NCBI
HuRef	2	58,127,658 - 58,209,806 (-)	NCBI		HuRef
CHM1_1	2	58,316,641 - 58,398,744 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	58,164,077 - 58,246,209 (-)	NCBI		T2T-CHM13v2.0

Fancl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	26,337,084 - 26,421,883 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	26,336,135 - 26,421,876 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	26,387,084 - 26,471,883 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	26,386,135 - 26,471,876 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	26,287,084 - 26,371,876 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	26,287,084 - 26,371,876 (+)	NCBI		MGSCv36	mm8
Celera	11	28,994,935 - 29,000,755 (-)	NCBI		Celera
Cytogenetic Map	11	A3.3	NCBI
cM Map	11	15.85	NCBI

Fancl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	104,449,403 - 104,515,297 (+)	NCBI		GRCr8
mRatBN7.2	14	100,249,733 - 100,317,958 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	100,248,875 - 100,314,255 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	104,569,751 - 104,647,120 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	105,813,840 - 105,891,206 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	102,285,669 - 102,363,036 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	110,675,306 - 110,740,880 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	110,676,090 - 110,740,317 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	110,368,478 - 110,433,487 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	107,211,448 - 107,276,828 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	107,230,315 - 107,299,602 (+)	NCBI
Celera	14	99,184,205 - 99,249,128 (+)	NCBI		Celera
Cytogenetic Map	14	q22	NCBI

Fancl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955424	25,251,689 - 25,307,180 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955424	25,251,701 - 25,307,236 (+)	NCBI	ChiLan1.0	ChiLan1.0

FANCL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	68,116,184 - 68,198,583 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	68,120,135 - 68,202,535 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	58,270,620 - 58,353,001 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	59,417,463 - 59,499,863 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	59,418,265 - 59,499,496 (-)	Ensembl	panpan1.1		panPan2

FANCL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	58,521,480 - 58,637,352 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	58,521,552 - 58,637,482 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	58,474,427 - 58,590,338 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	59,525,256 - 59,641,260 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	59,525,317 - 59,636,793 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	59,221,915 - 59,337,621 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	59,506,524 - 59,622,215 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	59,798,922 - 59,915,100 (-)	NCBI		UU_Cfam_GSD_1.0

Fancl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	24,451,294 - 24,543,595 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936491	4,029,388 - 4,119,976 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936491	4,057,312 - 4,119,966 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FANCL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	83,337,253 - 83,436,942 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	83,136,355 - 83,436,948 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	87,936,631 - 88,021,151 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Fancl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624833	3,603,383 - 3,663,572 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624833	3,603,712 - 3,692,540 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in FANCL
1479 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20


RefSeq Transcripts	XM_007970550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007970551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007970552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007970553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007970554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005243342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_492299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000012482 ⟹ ENSCSAP00000010516

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	14	48,725,541 - 48,805,356 (+)	Ensembl

RefSeq Acc Id:

XM_007970550 ⟹ XP_007968741

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	14	48,725,448 - 48,803,468 (+)	NCBI
Vero_WHO_p1.0	NW_023666045	62,939,983 - 63,017,950 (-)	NCBI

Sequence:

show sequence

AGGGGGTGCGAGAGGTTTAAGACAGAAGTGCTACAATGTCCAGGCTGTAAAAGTCATTTTATTCTGGAGGAAATGTAACACCAAAGTTGTAACAGTCTTTCAACAAAGTCAAACAGAATCATCAAAAG
GGCTCCTGGGACAATCGAGGTTAGAATGACGTTGGTCAGTCAGTCCGGCGGACTTGAGCGCAATCTTCCCTCTCACTACCGGTTGGGGAGCCCCGATGTTGCCTCCGGCAGAGCGCCACTTGGCCTGG
CCTGCGCTTTACCTTCATTTCCGCCCGCGGAATCCTCCAGGATCTTCCCGCCAAGGCTCGGGTTTCCGCTCCGCGGCGTCCAAGCGCAAGCGGACTGCGCATGTGCAGGACCCAGCAGCTCTAGAGCT
TTGCTGTGTCTCTCCGGACTTCGAGCTATGGCGGTGACGGAAGCGAGCCTGTTGCGCCAGTGCCCGCTGCTTCTGCCACAGAACCGGTCGAAAACCGTGTATGAGGGATTCATCTCAGCTCAGGGAAG
AGACTTCCACCTTAAAGTAGTGTTGCCTGAAGATTTACAACTGAAGAATGCAAGATTATTATGTAGTTGGCAGCTGAGAACAATACTTAATGGATACCATCAAATAGTACAGCAGAGGATGCAGCAAT
CTCCTGATCTAATGAGCTTTATGATGGAGTTGAAGATGCTTTTGGAAGTTGCCTTAAAGAATAGACAAGAGCTATATGCACCACCTCCTCCTCCCCAGTTCTACTCAAGCCTTATTGAAGAGATAGGA
ACTCTTGGTTGGGATAGACTTGTGTATGTGGATACCTGCTTCAGTACCATCAAGTTAAAAGCAGAAGATGCTTCTGGTAGAGAGCATTTAATAACTCTCAAGTTGAAGGCAAAGTATCCTGCAGAATC
ACCAGATTGTTTTGTGGATTTTCCTGTTCCATTTTCTGCTTCCCGGACACCTCAGGTAAATTCTCCTCAGAGCTCCTTAATAAGCATTTATAGTCAGTTTTTGGCAGCAATAGAATCACTAAAGGCAT
TCTGGGATGTTATGGATGAAATCGATGAGAAGACCTGGGTACTTGAGCCAGAAAAACCTCCACGGAGTGCAACAGCACGTAGAATTGCATTAGGGAATAATGTTTCCATAAATATAGAGGTAGACCCC
AGGCATCCTACTATGCTTCCTGAGTGCTTCTTTCTTGGAGCTGACCATGTGGTAAAACCCCTGGGAATTAAGCTGAGCAGGAACATACATTTGTGGGATCCAGAAAATAGTGTGCTACAAAACTTGAA
AGATGTTTTAGAAATTGATTTTCCAGCTCGTGCTATCCTGGAAAAATCTGATTTTACTATGGATTGTGGAATTTGTTATGCTTATCAACTTGATGGTGCCATTCCTGATCAAGTGTGTGATAATTCCC
AGTGTGGACAACCTTTCCATCAAATATGCTTATATGAGTGGCTGAGAGGACTACTAACTAGTAGACAGAGTTTTAACATCATATTTGGTGAATGTCCATATTGTAGTAAGGTAAGCAAATTGTTAATC
ACATCTCATAAAATGTCCTAGCTTTCAATAATATGTTCTAGAATACAGATCTATATATTTATATCAGCTTATCTAAAACTTTTGAAACTCATTATTCTTTATTTTTATTTTTCAAATTCTCTGATCAA
AAACATTACACTCCTTTTCTAGATTTCCTAGGTGATCTGAAACTTCAGAAAAGTGTTTTCCAAACTGTACTATGACACTATTTCTAGTATGAAGCAATTTTATGTTTTAGAGTGTCCATAAACTTTCT
TAAAATATGTTCTCTTTTTAAAGCCAATTACCTTAAAAATGTCTGGGAGGAAACACTGAAATAAGAATATAACATTTTGGTGAAGAGCTGGAAACTTAAAAAATTATCAAAAGGAATTTTGATATCTT
CAGAGAAAATATAAA

hide sequence

RefSeq Acc Id:

XM_007970551 ⟹ XP_007968742

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	14	48,725,448 - 48,803,892 (+)	NCBI
Vero_WHO_p1.0	NW_023666045	62,939,983 - 63,017,950 (-)	NCBI

Sequence:

show sequence

AGGGGGTGCGAGAGGTTTAAGACAGAAGTGCTACAATGTCCAGGCTGTAAAAGTCATTTTATTC
TGGAGGAAATGTAACACCAAAGTTGTAACAGTCTTTCAACAAAGTCAAACAGAATCATCAAAAGGGCTCCTGGGACAATCGAGGTTAGAATGACGTTGGTCAGTCAGTCCGGCGGACTTGAGCGCAAT
CTTCCCTCTCACTACCGGTTGGGGAGCCCCGATGTTGCCTCCGGCAGAGCGCCACTTGGCCTGGCCTGCGCTTTACCTTCATTTCCGCCCGCGGAATCCTCCAGGATCTTCCCGCCAAGGCTCGGGTT
TCCGCTCCGCGGCGTCCAAGCGCAAGCGGACTGCGCATGTGCAGGACCCAGCAGCTCTAGAGCTTTGCTGTGTCTCTCCGGACTTCGAGCTATGGCGGTGACGGAAGCGAGCCTGTTGCGCCAGTGCC
CGCTGCTTCTGCCACAGAACCGGTCGAAAACCGTGTATGAGGGATTCATCTCAGCTCAGGGAAGAGACTTCCACCTTAAAGTAGTGTTGCCTGAAGATTTACAACTGAAGAATGCAAGATTATTATGT
AGTTGGCAGCTGAGAACAATACTTAATGGATACCATCAAATAGTACAGCAGAGGATGCAGCAATCTCCTGATCTAATGAGCTTTATGATGGAGTTGAAGATGCTTTTGGAAGTTGCCTTAAAGAATAG
ACAAGAGCTATATGCACCACCTCCTCCTCCCCAGTTCTACTCAAGCCTTATTGAAGAGATAGGAACTCTTGGTTGGGATAGACTTGTGTATGTGGATACCTGCTTCAGTACCATCAAGTTAAAAGCAG
AAGATGCTTCTGGTAGAGAGCATTTAATAACTCTCAAGTTGAAGGCAAAGTATCCTGCAGAATCACCAGATTGTTTTGTGGATTTTCCTGTTCCATTTTCTGCTTCCCGGACACCTCAGGTAAATTCT
CCTCAGAGCTCCTTAATAAGCATTTATAGTCAGTTTTTGGCAGCAATAGAATCACTAAAGGCATTCTGGGATGTTATGGATGAAATCGATGAGAAGACCTGGGTACTTGAGCCAGAAAAACCTCCACG
GAGTGCAACAGCACGTAGAATTGCATTAGGGAATAATGTTTCCATAAATATAGAGGTAGACCCCAGGCATCCTACTATGCTTCCTGAGTGCTTCTTTCTTGGAGCTGACCATGTGGTAAAACCCCTGG
GAATTAAGCTGAGCAGGAACATACATTTGTGGGATCCAGAAAATAGTGTGCTACAAAACTTGAAAGATGTTTTAGAAATTGATTTTCCAGCTCGTGCTATCCTGGAAAAATCTGATTTTACTATGGAT
TGTGGAATTTGTTATGCTTATCAACTTGATGGTGCCATTCCTGATCAAGTGTGTGATAATTCCCAGTGTGGACAACCTTTCCATCAAATATGCTTATATGAGTGGCTGAGAGGACTACTAACTAGTAG
ACAGAGTTTTAACATCATATTTGGTGAATGTCCATATTGTAGTAAGCCAATTACCTTAAAAATGTCTGGGAGGAAACACTGAAATAAGAATATAACATTTTGGTGAAGAGCTGGAAACTTAAAAAATT
ATCAAAAGGAATTTTGATATCTTCAGAGAAAATATAAAGCAAGCAATACTAACATCAAAAGGACAGGTATGATGATGCCATAATAATAAATATCTGTGTTTGTCTCTTCGCTAAGAGTAAACTGGGAA
ATTGTAGGCCAAAGTCCAGTTGAACTTTCTGTGATCCCCGTGCTGACTGTGGAAGTGTATTTATACCAAGATGGAGATCTTGACTTCTTGAATATATCTGGACTGGTAAAATCTTGATGAGGTTCATA
AAATGAGTTTGGGAATTGTCTATATTTGAATTTTTGTGGGAAACTGTTTGCTTCATTCAAAAGCTCTTGAGACTCTTGATATTTCTCTCTTATCCTTGTGATTTCCTATGGAAAAAATACATGTATAG
TTTGTTAGATGTGAGTTATCCAAGTATTTATTTTGTGTAATGTATAAGAATGCTAAATAAAATGTTATACAATATCAA

hide sequence

RefSeq Acc Id:

XM_007970552 ⟹ XP_007968743

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	14	48,725,450 - 48,803,468 (+)	NCBI
Vero_WHO_p1.0	NW_023666045	62,939,983 - 63,017,950 (-)	NCBI

Sequence:

show sequence

GGGGTGCGAGAGGTTTAAGACAGAAGTGCTACAATGTCCAGGCTGTAAAAGTCATTTTATTCTGGAGGAAATGTAACACCAAAGTTGTAACAGTCTTTCAACAAAGTCAAACAGAATCATCAAAAGGG
CTCCTGGGACAATCGAGGTTAGAATGACGTTGGTCAGTCAGTCCGGCGGACTTGAGCGCAATCTTCCCTCTCACTACCGGTTGGGGAGCCCCGATGTTGCCTCCGGCAGAGCGCCACTTGGCCTGGCC
TGCGCTTTACCTTCATTTCCGCCCGCGGAATCCTCCAGGATCTTCCCGCCAAGGCTCGGGTTTCCGCTCCGCGGCGTCCAAGCGCAAGCGGACTGCGCATGTGCAGGACCCAGCAGCTCTAGAGCTTT
GCTGTGTCTCTCCGGACTTCGAGCTATGGCGGTGACGGAAGCGAGCCTGTTGCGCCAGTGCCCGCTGCTTCTGCCACAGAACCGGTCGAAAACCGTGTATGAGGGATTCATCTCAGCTCAGGGAAGAG
ACTTCCACCTTAAAGTAGTGTTGCCTGAAGATTTACAACTGAAGAATGCAAGATTATTATGTAGTTGGCAGCTGAGAACAATACTTAATGGATACCATCAAATAGTACAGCAGAGGATGCAGCAATCT
CCTGATCTAATGAGCTTTATGATGGAGTTGAAGATGCTTTTGGAAGTTGCCTTAAAGAATAGACAAGAGCTATATGCACCACCTCCTCCTCCCCAGTTCTACTCAAGCCTTATTGAAGAGATAGGAAC
TCTTGGTTGGGATAGACTTGTGTATGTGGATACCTGCTTCAGTACCATCAAGTTAAAAGCAGAAGATGCTTCTGGTAGAGAGCATTTAATAACTCTCAAGTTGAAGGCAAAGTATCCTGCAGAATCAC
CAGATTGTTTTGTGGATTTTCCTGTTCCATTTTCTGCTTCCCGGACACCTCAGAGCTCCTTAATAAGCATTTATAGTCAGTTTTTGGCAGCAATAGAATCACTAAAGGCATTCTGGGATGTTATGGAT
GAAATCGATGAGAAGACCTGGGTACTTGAGCCAGAAAAACCTCCACGGAGTGCAACAGCACGTAGAATTGCATTAGGGAATAATGTTTCCATAAATATAGAGGTAGACCCCAGGCATCCTACTATGCT
TCCTGAGTGCTTCTTTCTTGGAGCTGACCATGTGGTAAAACCCCTGGGAATTAAGCTGAGCAGGAACATACATTTGTGGGATCCAGAAAATAGTGTGCTACAAAACTTGAAAGATGTTTTAGAAATTG
ATTTTCCAGCTCGTGCTATCCTGGAAAAATCTGATTTTACTATGGATTGTGGAATTTGTTATGCTTATCAACTTGATGGTGCCATTCCTGATCAAGTGTGTGATAATTCCCAGTGTGGACAACCTTTC
CATCAAATATGCTTATATGAGTGGCTGAGAGGACTACTAACTAGTAGACAGAGTTTTAACATCATATTTGGTGAATGTCCATATTGTAGTAAGGTAAGCAAATTGTTAATCACATCTCATAAAATGTC
CTAGCTTTCAATAATATGTTCTAGAATACAGATCTATATATTTATATCAGCTTATCTAAAACTTTTGAAACTCATTATTCTTTATTTTTATTTTTCAAATTCTCTGATCAAAAACATTACACTCCTTT
TCTAGATTTCCTAGGTGATCTGAAACTTCAGAAAAGTGTTTTCCAAACTGTACTATGACACTATTTCTAGTATGAAGCAATTTTATGTTTTAGAGTGTCCATAAACTTTCTTAAAATATGTTCTCTTT
TTAAAGCCAATTACCTTAAAAATGTCTGGGAGGAAACACTGAAATAAGAATATAACATTTTGGTGAAGAGCTGGAAACTTAAAAAATTATCAAAAGGAATTTTGATATCTTCAGAGAAAATATAAA

hide sequence

RefSeq Acc Id:

XM_007970553 ⟹ XP_007968744

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	14	48,725,450 - 48,803,892 (+)	NCBI
Vero_WHO_p1.0	NW_023666045	62,939,989 - 63,017,950 (-)	NCBI

Sequence:

show sequence

GGGGTGCGAGAGGTTTAAGACAGAAGTGCTACAATGTCCAGGCTGTAAAAGTCATTTTATTCTGGAGGAAATGTAACACCAAAGTTGTAACAGTCTTTCAACAAAGTCAAACAGAATCATCAAAAGGG
CTCCTGGGACAATCGAGGTTAGAATGACGTTGGTCAGTCAGTCCGGCGGACTTGAGCGCAATCTTCCCTCTCACTACCGGTTGGGGAGCCCCGATGTTGCCTCCGGCAGAGCGCCACTTGGCCTGGCC
TGCGCTTTACCTTCATTTCCGCCCGCGGAATCCTCCAGGATCTTCCCGCCAAGGCTCGGGTTTCCGCTCCGCGGCGTCCAAGCGCAAGCGGACTGCGCATGTGCAGGACCCAGCAGCTCTAGAGCTTT
GCTGTGTCTCTCCGGACTTCGAGCTATGGCGGTGACGGAAGCGAGCCTGTTGCGCCAGTGCCCGCTGCTTCTGCCACAGAACCGGTCGAAAACCGTGTATGAGGGATTCATCTCAGCTCAGGGAAGAG
ACTTCCACCTTAAAGTAGTGTTGCCTGAAGATTTACAACTGAAGAATGCAAGATTATTATGTAGTTGGCAGCTGAGAACAATACTTAATGGATACCATCAAATAGTACAGCAGAGGATGCAGCAATCT
CCTGATCTAATGAGCTTTATGATGGAGTTGAAGATGCTTTTGGAAGTTGCCTTAAAGAATAGACAAGAGCTATATGCACCACCTCCTCCTCCCCAGTTCTACTCAAGCCTTATTGAAGAGATAGGAAC
TCTTGGTTGGGATAGACTTGTGTATGTGGATACCTGCTTCAGTACCATCAAGTTAAAAGCAGAAGATGCTTCTGGTAGAGAGCATTTAATAACTCTCAAGTTGAAGGCAAAGTATCCTGCAGAATCAC
CAGATTGTTTTGTGGATTTTCCTGTTCCATTTTCTGCTTCCCGGACACCTCAGAGCTCCTTAATAAGCATTTATAGTCAGTTTTTGGCAGCAATAGAATCACTAAAGGCATTCTGGGATGTTATGGAT
GAAATCGATGAGAAGACCTGGGTACTTGAGCCAGAAAAACCTCCACGGAGTGCAACAGCACGTAGAATTGCATTAGGGAATAATGTTTCCATAAATATAGAGGTAGACCCCAGGCATCCTACTATGCT
TCCTGAGTGCTTCTTTCTTGGAGCTGACCATGTGGTAAAACCCCTGGGAATTAAGCTGAGCAGGAACATACATTTGTGGGATCCAGAAAATAGTGTGCTACAAAACTTGAAAGATGTTTTAGAAATTG
ATTTTCCAGCTCGTGCTATCCTGGAAAAATCTGATTTTACTATGGATTGTGGAATTTGTTATGCTTATCAACTTGATGGTGCCATTCCTGATCAAGTGTGTGATAATTCCCAGTGTGGACAACCTTTC
CATCAAATATGCTTATATGAGTGGCTGAGAGGACTACTAACTAGTAGACAGAGTTTTAACATCATATTTGGTGAATGTCCATATTGTAGTAAGCCAATTACCTTAAAAATGTCTGGGAGGAAACACTG
AAATAAGAATATAACATTTTGGTGAAGAGCTGGAAACTTAAAAAATTATCAAAAGGAATTTTGATATCTTCAGAGAAAATATAAAGCAAGCAATACTAACATCAAAAGGACAGGTATGATGATGCCAT
AATAATAAATATCTGTGTTTGTCTCTTCGCTAAGAGTAAACTGGGAAATTGTAGGCCAAAGTCCAGTTGAACTTTCTGTGATCCCCGTGCTGACTGTGGAAGTGTATTTATACCAAGATGGAGATCTT
GACTTCTTGAATATATCTGGACTGGTAAAATCTTGATGAGGTTCATAAAATGAGTTTGGGAATTGTCTATATTTGAATTTTTGTGGGAAACTGTTTGCTTCATTCAAAAGCTCTTGAGACTCTTGATA
TTTCTCTCTTATCCTTGTGATTTCCTATGGAAAAAATACATGTATAGTTTGTTAGATGTGAGTTATCCAAGTATTTATTTTGTGTAATGTATAAGAATGCTAAATAAAATGTTATACAATATCAA

hide sequence

RefSeq Acc Id:

XM_007970554 ⟹ XP_007968745

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	14	48,725,447 - 48,803,468 (+)	NCBI
Vero_WHO_p1.0	NW_023666045	62,939,983 - 63,017,950 (-)	NCBI

Sequence:

show sequence

AAGGGGGTGCGAGAGGTTTAAGACAGAAGTGCTACAATGTCCAGGCTGTAAAAGTCATTTTATTCTGGAGGAAATGTAACACCAAAGTTGTAACAGTCTTTCAACAAAGTCAAACAGAATCATCAAAA
GGGCTCCTGGGACAATCGAGGTTAGAATGACGTTGGTCAGTCAGTCCGGCGGACTTGAGCGCAATCTTCCCTCTCACTACCGGTTGGGGAGCCCCGATGTTGCCTCCGGCAGAGCGCCACTTGGCCTG
GCCTGCGCTTTACCTTCATTTCCGCCCGCGGAATCCTCCAGGATCTTCCCGCCAAGGCTCGGGTTTCCGCTCCGCGGCGTCCAAGCGCAAGCGGACTGCGCATGTGCAGGACCCAGCAGCTCTAGAGC
TTTGCTGTGTCTCTCCGGACTTCGAGCTATGGCGGTGACGGAAGCGAGCCTGTTGCGCCAGTGCCCGCTGCTTCTGCCACAGAACCGGTCGAAAACCGTGTATGAGGGATTCATCTCAGCTCAGGGAA
GAGACTTCCACCTTAAAGTAGTGTTGCCTGAAGATTTACAACTGAAGAATGCAAGATTATTATGTAGTTGGCAGCTGAGAACAATACTTAATGGATACCATCAAATAGTACAGCAGAGGATGCAGCAA
TCTCCTGATCTAATGAGCTTTATGATGGAGTTGAAGATGCTTTTGGAAGTTGCCTTAAAGAATAGACAAGAGCTATATGCACCACCTCCTCCTCCCCAGTTCTACTCAAGCCTTATTGAAGAGATAGG
AACTCTTGGTTGGGATAGACTTGTGTATGTGGATACCTGCTTCAGTACCATCAAGTTAAAAGCAGAAGATGCTTCTGGTAGAGAGCATTTAATAACTCTCAAGTTGAAGGCAAAGAGCTCCTTAATAA
GCATTTATAGTCAGTTTTTGGCAGCAATAGAATCACTAAAGGCATTCTGGGATGTTATGGATGAAATCGATGAGAAGACCTGGGTACTTGAGCCAGAAAAACCTCCACGGAGTGCAACAGCACGTAGA
ATTGCATTAGGGAATAATGTTTCCATAAATATAGAGGTAGACCCCAGGCATCCTACTATGCTTCCTGAGTGCTTCTTTCTTGGAGCTGACCATGTGGTAAAACCCCTGGGAATTAAGCTGAGCAGGAA
CATACATTTGTGGGATCCAGAAAATAGTGTGCTACAAAACTTGAAAGATGTTTTAGAAATTGATTTTCCAGCTCGTGCTATCCTGGAAAAATCTGATTTTACTATGGATTGTGGAATTTGTTATGCTT
ATCAACTTGATGGTGCCATTCCTGATCAAGTGTGTGATAATTCCCAGTGTGGACAACCTTTCCATCAAATATGCTTATATGAGTGGCTGAGAGGACTACTAACTAGTAGACAGAGTTTTAACATCATA
TTTGGTGAATGTCCATATTGTAGTAAGGTAAGCAAATTGTTAATCACATCTCATAAAATGTCCTAGCTTTCAATAATATGTTCTAGAATACAGATCTATATATTTATATCAGCTTATCTAAAACTTTT
GAAACTCATTATTCTTTATTTTTATTTTTCAAATTCTCTGATCAAAAACATTACACTCCTTTTCTAGATTTCCTAGGTGATCTGAAACTTCAGAAAAGTGTTTTCCAAACTGTACTATGACACTATTT
CTAGTATGAAGCAATTTTATGTTTTAGAGTGTCCATAAACTTTCTTAAAATATGTTCTCTTTTTAAAGCCAATTACCTTAAAAATGTCTGGGAGGAAACACTGAAATAAGAATATAACATTTTGGTGA
AGAGCTGGAAACTTAAAAAATTATCAAAAGGAATTTTGATATCTTCAGAGAAAATATAAA

hide sequence

RefSeq Acc Id:

XR_005243342

Type:

NON-CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666045	62,939,983 - 63,017,950 (-)	NCBI


Protein RefSeqs	XP_007968741	(Get FASTA)	NCBI Sequence Viewer
	XP_007968742	(Get FASTA)	NCBI Sequence Viewer
	XP_007968743	(Get FASTA)	NCBI Sequence Viewer
	XP_007968744	(Get FASTA)	NCBI Sequence Viewer
	XP_007968745	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000010516.1

RefSeq Acc Id:	XP_007968745 ⟸ XM_007970554
- Peptide Label:	isoform X5
- UniProtKB:	A0A0D9RPH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007968742 ⟸ XM_007970551
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RPH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007968741 ⟸ XM_007970550
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RPH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007968744 ⟸ XM_007970553
- Peptide Label:	isoform X4
- UniProtKB:	A0A0D9RPH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007968743 ⟸ XM_007970552
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9RPH7 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000014388	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000012482.1	UniProtKB/TrEMBL
Gene3D-CATH	3.10.110.10	UniProtKB/TrEMBL
	3.10.110.20	UniProtKB/TrEMBL
	3.30.40.10	UniProtKB/TrEMBL
InterPro	Fancl	UniProtKB/TrEMBL
	FANCL_C	UniProtKB/TrEMBL
	FANCL_d2	UniProtKB/TrEMBL
	FANCL_d3	UniProtKB/TrEMBL
	FancL_N	UniProtKB/TrEMBL
	FancL_WD-rpt_cont_dom	UniProtKB/TrEMBL
	UBQ-conjugating_enzyme/RWD	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
NCBI Gene	FANCL	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE FANCL	UniProtKB/TrEMBL
	PTHR13206	UniProtKB/TrEMBL
Pfam	FANCL_C	UniProtKB/TrEMBL
	FANCL_d2	UniProtKB/TrEMBL
	FANCL_d3	UniProtKB/TrEMBL
	WD-3	UniProtKB/TrEMBL
SMART	FANCL_C	UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/TrEMBL
UniProt	A0A0D9RPH7	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - MGI

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM