Symbol:
GABRA4
Name:
gamma-aminobutyric acid type A receptor subunit alpha4
RGD ID:
18401239
Description:
ENCODES a protein that exhibits transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN central nervous system development (inferred); chloride transmembrane transport (inferred); chloride transport (inferred); ASSOCIATED WITH Ataxia (ortholog); autistic disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic specialization membrane (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
gamma-aminobutyric acid receptor subunit alpha-4; gamma-aminobutyric acid type A receptor alpha4 subunit
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 27 3,253,789 - 3,323,102 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 27 3,254,735 - 3,321,128 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666047 49,315,895 - 49,393,069 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
GABRA4 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 27 3,253,789 - 3,323,102 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 27 3,254,735 - 3,321,128 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666047 49,315,895 - 49,393,069 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
GABRA4 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 4 46,918,900 - 46,993,581 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 4 46,918,900 - 46,993,581 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 4 46,920,917 - 46,995,598 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 4 46,615,674 - 46,690,337 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 4 46,761,846 - 46,836,508 NCBI Celera 4 47,369,879 - 47,444,600 (-) NCBI Celera Cytogenetic Map 4 p12 NCBI HuRef 4 46,239,865 - 46,315,415 (-) NCBI HuRef CHM1_1 4 46,920,103 - 46,995,631 (-) NCBI CHM1_1 T2T-CHM13v2.0 4 46,886,225 - 46,960,936 (-) NCBI T2T-CHM13v2.0
Gabra4 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 71,727,077 - 71,815,651 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 71,727,092 - 71,815,651 (-) Ensembl GRCm39 Ensembl GRCm38 5 71,569,734 - 71,658,308 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 71,569,749 - 71,658,308 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 71,960,973 - 72,049,547 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 71,848,869 - 71,937,443 (-) NCBI MGSCv36 mm8 Celera 5 68,834,068 - 68,922,930 (-) NCBI Celera Cytogenetic Map 5 C3.2 NCBI cM Map 5 38.08 NCBI
Gabra4 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 14 36,944,747 - 37,021,652 (+) NCBI GRCr8 mRatBN7.2 14 36,590,782 - 36,667,724 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 14 36,590,782 - 36,665,844 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 14 36,935,370 - 37,010,517 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 14 38,240,130 - 38,315,273 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 14 36,728,476 - 36,803,610 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 14 39,154,072 - 39,230,994 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 14 39,154,529 - 39,231,695 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 14 38,966,016 - 39,040,606 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 14 39,047,461 - 39,122,531 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 14 39,049,851 - 39,124,917 (+) NCBI Celera 14 35,813,603 - 35,888,671 (+) NCBI Celera Cytogenetic Map 14 p11 NCBI
Gabra4 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955443 1,564,202 - 1,632,580 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955443 1,564,794 - 1,631,975 (+) NCBI ChiLan1.0 ChiLan1.0
GABRA4 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 3 80,876,574 - 80,952,059 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 4 81,138,247 - 81,213,682 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 4 75,163,796 - 75,240,049 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 4 85,894,401 - 85,970,077 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 4 85,894,401 - 85,960,783 (+) Ensembl panpan1.1 panPan2
GABRA4 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 13 42,889,100 - 42,958,604 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 13 42,897,655 - 42,959,206 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 13 42,690,028 - 42,908,686 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 13 43,345,979 - 43,564,367 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 13 43,500,264 - 43,565,899 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 13 43,023,386 - 43,242,431 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 13 43,085,285 - 43,303,834 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 13 43,439,087 - 43,657,538 (-) NCBI UU_Cfam_GSD_1.0
Gabra4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405285 33,123,748 - 33,190,987 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936482 13,109,803 - 13,174,492 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936482 13,109,803 - 13,174,492 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
GABRA4 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 8 36,874,331 - 36,942,773 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 8 36,875,649 - 36,943,016 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 8 38,744,693 - 38,811,740 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
Gabra4 (Heterocephalus glaber - naked mole-rat)
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCSAT00000015231 ⟹ ENSCSAP00000013176
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 Ensembl 27 3,254,735 - 3,321,128 (+) Ensembl
RefSeq Acc Id:
XM_008017485 ⟹ XP_008015676
Type:
CODING
Position:
Green Monkey Assembly Chr Position (strand) Source ChlSab1.1 27 3,253,789 - 3,323,102 (+) NCBI Vero_WHO_p1.0 NW_023666047 49,315,895 - 49,393,069 (+) NCBI
Sequence:
TTTCTCTTTTTCCTCACCTTTCTCTCTCCAGCCATCCTTGCCCCCTACCTAAAGCGGTCAACCTCTGGAAGTAAGTCAACTCCATTCTGAAAAAGAAGAGTGTCGCAAGAAGTGAAAGTGATTTTGAC CAGAGGTGGCTTGTCTCCACTTCTCCCCTCCTCTCCAGAAAAGGATGGAGCAGCAAAGAGGAGGGTGTGCGCGTGTCTGGTGGAGGCGGGTAAAGAAATGGGGTGTCTTTAAAGCAATAGCTTAGCAA ATACTGGGACTAGAGTGCGGCTCGAGTCCACTTCCCAACAGTTTGGCGAGAGTCAGCCGGGTGAGTTGTAACCCCCGTTAGCAGGAAGAATCTTTTCGCTTTCATTGCCCTCCCTACCGCCCCCCATA ACACCTGAAGGGGAGGGTCTCAAAGGTCTTTTGAGCCCGGACTTGATCCCCTCTCCTCACCACCGCTACCACCCCACGCCCAGCAGTCCCCATCACCCGCCCTTTCTCCACCTCCAACCTTGACTCTG GGTACAAACAGGTCCTCGCACAACCTGACGAGAGAGGAGCTTCATTGGTTAGATCCAAATCCCAGCGGAAGGGAGGGGCCCAGGAGGGAGGAGGCCGAGCACTGCTGTGGGCGGGAAGCCCACCTGGG GTCGGGGGCTGAGGAGCCGGAGGAGGGGCGAGATACCCGGGTCCTCATCCGCGGAGTTACGGTCGGAACAAACTTGGCGAGTCTTGCAGCGCAAGCGCGCGGATGCTAACCCCAGAACCTTCAGCGCG CGGGCACGAAAGGGTGTGGAGCGGTATACATAGCTCTACATACACATTGAGCGCTGAGCGAGAAAGGAGGGGGCGAGGAAGGCAGGTTCCGCCTCCCCTGGCCCCGTGCACACACACGCCCACCGCGG CTCGGGCTGGCTGAGCGCGGGCGAGTGTGAGCGCGAGTGTGCGCACGCCGCGGGAGCCTCTCTGCCCTCTCCTCGCACCCTGCTCAGGGCATCTGAAGAGCCTGGAAACGTGAACAGGCTTGAAGTAT GGCATGTTGCAAAGATGGTTTCTGCCAAGAAGGTACCCGCGATCGCTCTGTCCGCCGGGGTCAGTTTCGCCCTCCTGCGCTTCCTGTGCCTGGCGGTTTGTTTAAACGAATCCCCAGGACAGAACCAA AAGGAGGAGAAATTGTGCACAGAAAATTTCACCCGCATCCTGGACAGTTTGCTCGATGGTTATGACAACAGGCTGCGTCCTGGATTTGGGGGTCCTGTTACAGAAGTGAAAACTGACATATATGTCAC CAGCTTTGGACCTGTTTCTGACGTTGAAATGGAATACACAATGGATGTGTTCTTCAGACAGACATGGATTGACAAAAGACTAAAATATGATGGCCCCATTGAAATTTTGAGATTGAACAATATGATGG TAACAAAAGTATGGACCCCTGATACTTTCTTCAGGAATGGAAAGAAATCTGTCTCACATAATATGACAGCTCCAAATAAGCTTTTTAGAATTATGAGAAATGGTACTATTTTATACACAATGAGACTC ACCATAAGTGCGGAGTGTCCCATGAGATTGGTGGATTTTCCCATGGATGGTCATGCATGCCCTTTGAAATTCGGGAGTTATGCCTATCCAAAGAGTGAGATGATCTACACCTGGACAAAAGGTCCTGA GAAATCAGTTGAAGTGCCAAAGGAGTCTTCCAGCTTAGTTCAATATGATTTGATTGGGCAAACTGTATCAAGTGAAACCATCAAATCGATTACGGGTGAATATATTGTCATGACGGTTTACTTCCACC TCAGACGGAAGATGGGTTATTTTATGATTCAGACCTATATTCCATGCATTATGACAGTGATTCTTTCTCAAGTTTCATTCTGGATAAATAAAGAATCAGTTCCTGCTAGGACTGTATTTGGAATAACA ACTGTCCTCACCATGACCACACTAAGCATCAGTGCACGACATTCTTTGCCCAAAGTGTCCTATGCTACTGCCATGGATTGGTTCATAGCTGTCTGCTTTGCTTTTGTATTTTCGGCCCTTATCGAGTT TGCTGCTGTCAACTATTTCACCAATATCCAAATGGAAAAAGCCAAAAGGAAGACATCAAAGCCCCCTCAGGAAGTTCCCGCTGCTCCAGTGCAGAGAGAGAAGCATCCTGAAGCCCCTCTGCAGAATA CAAATGCCAATTTGAACATGAGAAAAAGAACAAATGCTTCGGTTCACTCTGAATCTGATGTTGGCAACAGAACTGTGGTGGGAAACCATTCAAGCAAATCTTCCACAGTTGTTCAAGAATCTTCTAAA GGCACACCTCGGTCTTACTTAGCTTCCAGTCCAAACCCATTCAGCCGTGCAAATGCAGCTGAAACCATATCTGCGGCAAGAGCACTTCCATCTGCTTCTCCTGCTTCTAGCCGAACTGGATATCTGTC TCGAAAGGCTTCAGTTGCATCTGCTTCTACTCGTCACATGTTTGGATCAAGATTGCAGAGGATTAAGACCACAGTTAATACCATAGGGGCTACTGGGAAGTTGTCAGCTACTCCTCCTCCACCAGCTC CACCACCTTCTGGATCTGGCACAAGTAAAATTGACAAATATGCCCGTATTCTCTTTCCAGTCACATTTGGGGCATTTAACATGGTTTATTGGGTTGTTTATTTATCTAAGGACACTATGGAGAAATCA GAAAGTCTAATGTAATTTTGTTGCTATAGTAGTTTGCTAAAAGATGATGAAAATGCAGAATGTCTTTTTAAATGTTTTTAAATATAAACAACTATTCTTTATTAAAATAAAAAATCTATGTAATTTTT TCCATTTAAAGATATAAGCCAGTTATTGGGAGAGTTAATTCCTCAGTGAAAAAGTGAACTATGTTTTTATTTTCCAGAAAAATTATTTTAAAAGAACTCAGCATTCACTTAGATAGAATACACACCAT CCTGGAAAGTTGGGATAAGAGAAATAGAGCTATTAGAGACATGTGGCACATATTTTTTCATTGATATTTGAAAACAGACTATGACATTTTAAAAATCTGCCCAATGAATATCAACCTGCCACCCTAAA TTTCCCAGTGGCACCGCCCTTAACGAGAACGGTTTATTGGATGTCATATGCAGTGACCTTTGGTGATCTTCTTAGGAGCTTCAGGAAAAGAAATTTTCCTGTTAAATGAAACATTGGCAAAAGAAAAT GGAATAGTATAAACGCTGATCAATAGAGTAAAAACTCTGCAGCATAAAAAACTAAGACAAAGACCAGAGGAAACATGTTCCCTTTCTTATGTTGGCCAAACAGTCCTTAACAGTTAATTTGAAATTTT GTTCTCTGAGCCAAAGTTTAACTCATTGTATGAATTCTTTTTCATGGTAGTTCATTCAGTTATGTATTTATTTACTACATAGTTATTCAGAGCCTGCTGTGTTCCAGGAACTATGCTAGAAACTGTCT CTCTAGGAAAACTCTTGCACCTTTACCTACAATATTACTTAAAAAGTAGAACAGTCAATGCATGCCAAAGAACCATAAACTAGCAGAGGACATTGCATTCTTTAGTGAAGGACATTTATTTAGAGTCT GACAACATATTCAAAATATTTTCTCCTCCTATACCGATAGTGGATAACAAATATATTTGTTCACATAACCACTTTGAGATAAGTACATGTTAGTACAACTTTAGCAATTGGTTTTCCAAATAGATGAG AATGTGGTACAGATTGTTCTGTAAGTGAAAAGCATTGTGTACTTGAAAGTAAAAATCTGGGCACTATAAAACTTAATAGATTAACTGTCTCAAATTTGATCAGAGTCACAGAGTAGAATTTGATCAGA ATCACAGAATCATCAGAAATAGGAACTCAGCACAGTCATTTTCAGGTGCTTTCCCCAACATAGATCTATACATTAACTAGTGAAATGCTGTATTTTGAAGAATTTTTGTGTCTGTAGTTCTGTAATTC TGGGCAGTCTTCATGTTGGTTTTTTAGGAGTCTTTTTATAAGGTTTTATAACTAAGGTGAATATTTTAAAATTAAGAGAGCGGCAAATGAAAGGAGTAAAGAAAATATAGCTGTGGGGTAGAATGCCA CTGACCCTGCTATGTGGTTTATTAGGATTTTCATCTACTGACTTCTTTCTCATTAGGTAGGCTTAACAACTTAATTGAAAATTTTGCAACTGTCTATGCAGCTCAACCTAAGTCTGGTTTTTGTCATA TTGCCTTTAGATTTTCTTCTGTGCTTCTCTCTATCTGCTCTGGAATGGATGAGTGAATGTGTTCTGGGTGTTTTAGGGAACATATTGATAGAAATGGCCACATTGCAGACGAAATCACTCTCTCTCTG TTTGTTTGTTTGTTTGTTTGTTTGTTTTAGAAAAGAATTGATAGTAGGTAATTGGCATCGATTTTTCAGTTATTTCATTACCTTATAATAGTTTTTGAGACCTGAAAATTGTGCAAATGTCAAATATT AATTGTAAGTCATATCTAAGAATTCTTTCTTGGCTGTCTTTCTAGGTATTCCATAAAATCAACACATTTTAAAGCTGAAAGATACTGTAGAAATCATCCAGTCCCAATGCCCCATTTTAAAACTGATT CTAGTAAAATTAGGCCTGGTAACATCTGTATATATGTATATATTTAATAAAGAGTACTTGTACAAAAAA
hide sequence
RefSeq Acc Id:
XP_008015676 ⟸ XM_008017485
Ensembl Acc Id:
ENSCSAP00000013176 ⟸ ENSCSAT00000015231