SLC52A2 (solute carrier family 52 member 2)

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Gene: SLC52A2 (solute carrier family 52 member 2) Chlorocebus sabaeus

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Symbol:

SLC52A2

Name:

solute carrier family 52 member 2

RGD ID:

18378483

Description:

ENCODES a protein that exhibits 4-hydroxybutyrate receptor activity (inferred); riboflavin transmembrane transporter activity (inferred); INVOLVED IN flavin adenine dinucleotide biosynthetic process (ortholog); riboflavin metabolic process (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 9 (ortholog); Brown-Vialetto-Van Laere syndrome (ortholog); Brown-Vialetto-Van Laere syndrome 1 (ortholog); FOUND IN plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

solute carrier family 52, riboflavin transporter, member 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	138,570,451 - 138,573,072 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	138,571,081 - 138,573,079 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,290,261 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive nonsyndromic deafness 9 (ISO)

Brown-Vialetto-Van Laere syndrome (ISO)

Brown-Vialetto-Van Laere syndrome 1 (ISO)

Brown-Vialetto-Van Laere syndrome 2 (ISO)

epidermolysis bullosa simplex with muscular dystrophy (ISO)

genetic disease (ISO)

holoprosencephaly (ISO)

sensorineural hearing loss (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

flavin adenine dinucleotide biosynthetic process (ISO)

riboflavin metabolic process (ISO)

riboflavin transport (IEA)

Cellular Component

plasma membrane (IEA,ISO)

Molecular Function

4-hydroxybutyrate receptor activity (IEA)

protein binding (ISO)

riboflavin transmembrane transporter activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SLC52A2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	138,570,451 - 138,573,072 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	138,571,081 - 138,573,079 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,290,261 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

SLC52A2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	144,358,552 - 144,361,272 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	144,333,957 - 144,361,286 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	145,582,212 - 145,584,932 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	145,553,033 - 145,555,753 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	145,553,032 - 145,555,754	NCBI
Celera	8	141,757,606 - 141,760,327 (+)	NCBI		Celera
Cytogenetic Map	8	q24.3	NCBI
HuRef	8	140,696,155 - 140,698,884 (+)	NCBI		HuRef
CHM1_1	8	145,620,638 - 145,623,367 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	145,527,181 - 145,529,901 (+)	NCBI		T2T-CHM13v2.0

Slc52a2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	76,422,994 - 76,432,078 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	76,423,032 - 76,428,808 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	76,538,814 - 76,547,878 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	76,538,832 - 76,544,608 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	76,369,373 - 76,372,560 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	76,366,198 - 76,369,385 (+)	NCBI		MGSCv36	mm8
Celera	15	78,039,389 - 78,042,576 (+)	NCBI		Celera
Cytogenetic Map	15	D3	NCBI
cM Map	15	36.04	NCBI

Slc52a2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	110,126,632 - 110,146,647 (+)	NCBI		GRCr8
mRatBN7.2	7	108,246,003 - 108,267,642 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	108,262,612 - 108,268,034 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	110,006,876 - 110,010,278 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	112,230,573 - 112,233,981 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	112,189,020 - 112,192,430 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	117,605,038 - 117,608,460 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	117,605,050 - 117,608,460 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	117,575,356 - 117,596,091 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	114,590,752 - 114,594,162 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	104,613,931 - 104,617,341 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

Slc52a2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	2,979,889 - 2,982,203 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	2,944,169 - 2,982,203 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC52A2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	161,845,591 - 161,848,480 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	137,375,495 - 137,378,378 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	141,122,292 - 141,124,985 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	144,111,766 - 144,114,392 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	144,112,498 - 144,114,319 (+)	Ensembl	panpan1.1		panPan2

SLC52A2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	37,779,896 - 37,786,653 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	37,783,562 - 37,786,621 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	37,742,477 - 37,749,280 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	38,255,411 - 38,262,214 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	38,255,350 - 38,262,219 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	37,947,241 - 37,954,043 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	38,055,893 - 38,062,696 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	38,532,243 - 38,539,046 (+)	NCBI		UU_Cfam_GSD_1.0

Slc52a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	460,080 - 462,494 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	7,881,890 - 7,888,592 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	7,886,169 - 7,888,592 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC52A2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	421,474 - 424,384 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	421,457 - 429,360 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	509,904 - 517,521 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Slc52a2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	12,486,016 - 12,491,331 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	12,465,032 - 12,491,809 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008001915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008001916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008001917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008001918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037999973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037999974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037999975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037999976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000006577 ⟹ ENSCSAP00000004781

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	8	138,571,081 - 138,573,079 (+)	Ensembl

RefSeq Acc Id:

XM_008001915 ⟹ XP_008000106

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	138,570,481 - 138,573,072 (+)	NCBI
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,290,261 (-)	NCBI

Sequence:

show sequence

AGTCGCGGCGGGTGAGTCCGGTGGTGGCTGCTGTCGGGTCCTGGGCTTTCTGGACTGAGGCGGC
GTCCCTGGGCCGGACGGCGGCGTCCTGGCGTGGCGAGAAGCCGGCACTAGAGCGGGAGCGCACT
GGGCGCGGGACGGGAGGCGTAGGGACCGGACGGCTCGCGGGTCGCCCACCTGAAGCTGGTGAGA
GGGCGGCGCCCCTACGAGCAGAGCCGCCCCAGCCACTCCTCTGGGATCTGACTTGGCTCCTGCG
GTCCCGGGCACCGCGAAGCCCTGGGGCGTGCTTGGCTCCTGCTGGTAGGCGCCTTGTCCCAGTG
TCCGGCTTGGGGTGGTGGTTGCAGTGACTCCAACCCCGCCTCTCCCTGGAGAGGAGGGCTCCAC
TCGCTCCTTCGGCCTCCTCCCCTGGGGCCGCAGCGACTCGGGCCGGCTTCCTGCTTCCCTACCT
GCCGGCGGTCCCGACGCTGGCGGGCGGTGCTGCTGGCTAGAAGAGGTCTTCAGTTCCCAGAAGA
GCCAAAGCGTCTCTGGACCTAGGTGGGAAAAGAACTGGCTGTGACCTTTGCCTTGACCTGGAAG
GGCGCAGCCTTGGACTGAATGGCAGCACCCACACCCGGCCGTCCGGTGCTGACCCACCTGCTGG
TGGCTCTCTTTGGCATGGGCTCCTGGGCTGCGGTCAATGGGATCTGGGTGGAGCTACCTGTGGT
GGTCAAAGAGCTTCCGGAGGGTTGGAGTCTCCCCTCCTACGTCTCTGTGCTTGTGGCGCTGGGG
AACCTGGGTCTGCTGGTGGTGACCCTTTGGAGGCGGCTGGCCCCAGGAAAGGGCGAGCGGGTCC
CCATCCGGGTGGTGCAGGTGCTGAGCATGGTGGGCACAGCTCTCCTGGCCTTTCTGTGGCACCA
CGTGGTCCTAGTGGCAGGACAGTTGCATTCTGTGGCCTTCTTAGCACTGGCCTTTGTGTTGGCG
CTGGCATGCTGTGCCTCTAATGTCACTTTCCTGCCCTTCCTGAGCCACCTGCCACCTCGCTTCT
TACGGTCATTCTTCCTGGGTCAAGGCCTGAGTGCCCTGCTGCCCTGCGTGCTGGCCCTAGTGCA
GGGTGTGGGCCGCTTTGAGTGCCCGCCAGCCCCCATCAACGGCACCCCCGGCCCCCCACTCGAC
TTCCCTGAGCGTTTTCCCGCCAGCACCTTCTTCTGGGCACTGACTGCCCTTTTGGTCACTTCAG
CTGCTGCCTTTCAGGGTCTCCTGGTGCTGTTGCCACCACCATCTGTACCCACAGGGGTCTTAGG
ATCAGGCCTCCAGGTGGGAGCCCCAGGAGCAGAGGAAGAGGTGGAAGAGGCCTCACCATTGCAA
GAGCCACCAAGCCAGGCAGCAGGCACCACCCCTGGTCCAGACCCTAAGGCCTATCAGCTTCTCT
CAGCCCACAGTGCCTGCCTGCTGGGCCTGTTGGCCGCCACCAATGCACTGACCAACGGCGTGCT
ACCTGCTGTGCAGAGCTTTTCCTGCTTACCCTACGGGCGTCTGGCCTACCACCTGGCTGTGGTG
CTGGGCAGTGCTGCCAATCCCCTGGCCTGCTTCCTGGCCATGGGTGTGCTGTGCAGATCCTTGG
CAGGGCTGGGCGGCCTCTCTCTGCTGGGCGTGCTCTTTGGGGGCTACCTGATGGCGCTGGCAGT
CCTGAGCCCCTGCCCGCCCCTGGTGGGCACCTCGGCAGGGGTGGTCCTCGTGGTGCTGTCGTGG
GTGCTGTGTCTTGGCGTTTTCTCCTACGTGAAGGTGGCAGCCAGCTCCCTGCTGCATGGCGGGG
GCGGGCCGGCATTGCTGGCAGCCGGTGTGGCCATCCAGGTGGGCTCTCTGCTCGGCGCTGTTGC
TATGTTCCCCCCCACCAGCATCTATCACGTGTTCCACAGCAGAAAGGACTGTGCAGACCCCTGT
GACTCCTGAGCCTGGGCAGGTGGGGACCCCGCTCCCCGACGCCTGTCTTTCCCTCAATGCTACC
ACCATGCCTGAGTGCCTGCAGCCCAGGAGGCCCGCACACCGGTACACTCGTGGACACCTGCGCA
CTCCATAGGAGACCCTGGCTCTCCGGGGCGGGGGGAAAGGGCAGGGAGCAGGCTTGGAGCCAGG
GACCGGTGGGGGCTGTAGGGTAAGCCCCTGAGCCTAGGACCTACGTGTGGTTTGCGTAATAAAA
CATTTCTATTTAATGA

hide sequence

RefSeq Acc Id:

XM_008001916 ⟹ XP_008000107

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	138,570,481 - 138,573,072 (+)	NCBI
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,290,261 (-)	NCBI

Sequence:

show sequence

AGTCGCGGCGGGTGAGTCCGGTGGTGGCTGCTGTCGGGTCCTGGGCTTTCTGGACTGAGGCGGC
GTCCCTGGGCCGGACGGCGGCGTCCTGGCGTGGCGAGAAGCCGGCACTAGAGCGGGAGCGCACT
GGGCGCGGGACGGGAGGCGTAGGGACCGGACGGCTCGCGGGTCGCCCACCTGAAGCTGGTGAGA
GGGCGGCGCCCCTACGAGCAGAGCCGCCCCAGCCACTCCTCTGGGATCTGACTTGGCTCCTGCG
GTCCCGGGCACCGCGAAGCCCTGGGGCGTGCTTGGCTCCTGCTGGTAGGCGCCTTGTCCCAGTG
TCCGGCTTGGGGTGGTGGTTGCAGTGACTCCAACCCCGCCTCTCCCTGGAGAGGAGGGCTCCAC
TCGCTCCTTCGGCCTCCTCCCCTGGGGCCGCAGCGACTCGGGCCGGCTTCCTGCTTCCCTACCT
GCCGGCGGTCCCGACGCTGGCGGGCGGTGCTGCTGGAAGAGGTCTTCAGTTCCCAGAAGAGCCA
AAGCGTCTCTGGACCTAGGTGGGAAAAGAACTGGCTGTGACCTTTGCCTTGACCTGGAAGGGCG
CAGCCTTGGACTGAATGGCAGCACCCACACCCGGCCGTCCGGTGCTGACCCACCTGCTGGTGGC
TCTCTTTGGCATGGGCTCCTGGGCTGCGGTCAATGGGATCTGGGTGGAGCTACCTGTGGTGGTC
AAAGAGCTTCCGGAGGGTTGGAGTCTCCCCTCCTACGTCTCTGTGCTTGTGGCGCTGGGGAACC
TGGGTCTGCTGGTGGTGACCCTTTGGAGGCGGCTGGCCCCAGGAAAGGGCGAGCGGGTCCCCAT
CCGGGTGGTGCAGGTGCTGAGCATGGTGGGCACAGCTCTCCTGGCCTTTCTGTGGCACCACGTG
GTCCTAGTGGCAGGACAGTTGCATTCTGTGGCCTTCTTAGCACTGGCCTTTGTGTTGGCGCTGG
CATGCTGTGCCTCTAATGTCACTTTCCTGCCCTTCCTGAGCCACCTGCCACCTCGCTTCTTACG
GTCATTCTTCCTGGGTCAAGGCCTGAGTGCCCTGCTGCCCTGCGTGCTGGCCCTAGTGCAGGGT
GTGGGCCGCTTTGAGTGCCCGCCAGCCCCCATCAACGGCACCCCCGGCCCCCCACTCGACTTCC
CTGAGCGTTTTCCCGCCAGCACCTTCTTCTGGGCACTGACTGCCCTTTTGGTCACTTCAGCTGC
TGCCTTTCAGGGTCTCCTGGTGCTGTTGCCACCACCATCTGTACCCACAGGGGTCTTAGGATCA
GGCCTCCAGGTGGGAGCCCCAGGAGCAGAGGAAGAGGTGGAAGAGGCCTCACCATTGCAAGAGC
CACCAAGCCAGGCAGCAGGCACCACCCCTGGTCCAGACCCTAAGGCCTATCAGCTTCTCTCAGC
CCACAGTGCCTGCCTGCTGGGCCTGTTGGCCGCCACCAATGCACTGACCAACGGCGTGCTACCT
GCTGTGCAGAGCTTTTCCTGCTTACCCTACGGGCGTCTGGCCTACCACCTGGCTGTGGTGCTGG
GCAGTGCTGCCAATCCCCTGGCCTGCTTCCTGGCCATGGGTGTGCTGTGCAGATCCTTGGCAGG
GCTGGGCGGCCTCTCTCTGCTGGGCGTGCTCTTTGGGGGCTACCTGATGGCGCTGGCAGTCCTG
AGCCCCTGCCCGCCCCTGGTGGGCACCTCGGCAGGGGTGGTCCTCGTGGTGCTGTCGTGGGTGC
TGTGTCTTGGCGTTTTCTCCTACGTGAAGGTGGCAGCCAGCTCCCTGCTGCATGGCGGGGGCGG
GCCGGCATTGCTGGCAGCCGGTGTGGCCATCCAGGTGGGCTCTCTGCTCGGCGCTGTTGCTATG
TTCCCCCCCACCAGCATCTATCACGTGTTCCACAGCAGAAAGGACTGTGCAGACCCCTGTGACT
CCTGAGCCTGGGCAGGTGGGGACCCCGCTCCCCGACGCCTGTCTTTCCCTCAATGCTACCACCA
TGCCTGAGTGCCTGCAGCCCAGGAGGCCCGCACACCGGTACACTCGTGGACACCTGCGCACTCC
ATAGGAGACCCTGGCTCTCCGGGGCGGGGGGAAAGGGCAGGGAGCAGGCTTGGAGCCAGGGACC
GGTGGGGGCTGTAGGGTAAGCCCCTGAGCCTAGGACCTACGTGTGGTTTGCGTAATAAAACATT
TCTATTTAATGA

hide sequence

RefSeq Acc Id:

XM_008001917 ⟹ XP_008000108

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	138,570,451 - 138,573,072 (+)	NCBI
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,290,261 (-)	NCBI

Sequence:

show sequence

GGCCGTGGGCCATGCGGGGGGCGGGCCCGGAGTCGCGGCGGGTGAGTCCGGTGGTGGCTGCTGT
CGGGTCCTGGGCTTTCTGGACTGAGGCGGCGTCCCTGGGCCGGACGGCGGCGTCCTGGCGTGGC
GAGAAGCCGGCACTAGAGCGGGAGCGCACTGGGCGCGGGACGGGAGGCGTAGGGACCGGACGGC
TCGCGGGTCGCCCACCTGAAGCTGGTGAGAGGGCGGCGCCCCTACGAGCAGAGCCGCCCCAGCC
ACTCCTCTGGGATCTGACTTGGCTCCTGCGGTCCCGGGCACCGCGAAGCCCTGGGGCGTGCTTG
GCTCCTGCTGCTAGAAGAGGTCTTCAGTTCCCAGAAGAGCCAAAGCGTCTCTGGACCTAGGTGG
GAAAAGAACTGGCTGTGACCTTTGCCTTGACCTGGAAGGGCGCAGCCTTGGACTGAATGGCAGC
ACCCACACCCGGCCGTCCGGTGCTGACCCACCTGCTGGTGGCTCTCTTTGGCATGGGCTCCTGG
GCTGCGGTCAATGGGATCTGGGTGGAGCTACCTGTGGTGGTCAAAGAGCTTCCGGAGGGTTGGA
GTCTCCCCTCCTACGTCTCTGTGCTTGTGGCGCTGGGGAACCTGGGTCTGCTGGTGGTGACCCT
TTGGAGGCGGCTGGCCCCAGGAAAGGGCGAGCGGGTCCCCATCCGGGTGGTGCAGGTGCTGAGC
ATGGTGGGCACAGCTCTCCTGGCCTTTCTGTGGCACCACGTGGTCCTAGTGGCAGGACAGTTGC
ATTCTGTGGCCTTCTTAGCACTGGCCTTTGTGTTGGCGCTGGCATGCTGTGCCTCTAATGTCAC
TTTCCTGCCCTTCCTGAGCCACCTGCCACCTCGCTTCTTACGGTCATTCTTCCTGGGTCAAGGC
CTGAGTGCCCTGCTGCCCTGCGTGCTGGCCCTAGTGCAGGGTGTGGGCCGCTTTGAGTGCCCGC
CAGCCCCCATCAACGGCACCCCCGGCCCCCCACTCGACTTCCCTGAGCGTTTTCCCGCCAGCAC
CTTCTTCTGGGCACTGACTGCCCTTTTGGTCACTTCAGCTGCTGCCTTTCAGGGTCTCCTGGTG
CTGTTGCCACCACCATCTGTACCCACAGGGGTCTTAGGATCAGGCCTCCAGGTGGGAGCCCCAG
GAGCAGAGGAAGAGGTGGAAGAGGCCTCACCATTGCAAGAGCCACCAAGCCAGGCAGCAGGCAC
CACCCCTGGTCCAGACCCTAAGGCCTATCAGCTTCTCTCAGCCCACAGTGCCTGCCTGCTGGGC
CTGTTGGCCGCCACCAATGCACTGACCAACGGCGTGCTACCTGCTGTGCAGAGCTTTTCCTGCT
TACCCTACGGGCGTCTGGCCTACCACCTGGCTGTGGTGCTGGGCAGTGCTGCCAATCCCCTGGC
CTGCTTCCTGGCCATGGGTGTGCTGTGCAGATCCTTGGCAGGGCTGGGCGGCCTCTCTCTGCTG
GGCGTGCTCTTTGGGGGCTACCTGATGGCGCTGGCAGTCCTGAGCCCCTGCCCGCCCCTGGTGG
GCACCTCGGCAGGGGTGGTCCTCGTGGTGCTGTCGTGGGTGCTGTGTCTTGGCGTTTTCTCCTA
CGTGAAGGTGGCAGCCAGCTCCCTGCTGCATGGCGGGGGCGGGCCGGCATTGCTGGCAGCCGGT
GTGGCCATCCAGGTGGGCTCTCTGCTCGGCGCTGTTGCTATGTTCCCCCCCACCAGCATCTATC
ACGTGTTCCACAGCAGAAAGGACTGTGCAGACCCCTGTGACTCCTGAGCCTGGGCAGGTGGGGA
CCCCGCTCCCCGACGCCTGTCTTTCCCTCAATGCTACCACCATGCCTGAGTGCCTGCAGCCCAG
GAGGCCCGCACACCGGTACACTCGTGGACACCTGCGCACTCCATAGGAGACCCTGGCTCTCCGG
GGCGGGGGGAAAGGGCAGGGAGCAGGCTTGGAGCCAGGGACCGGTGGGGGCTGTAGGGTAAGCC
CCTGAGCCTAGGACCTACGTGTGGTTTGCGTAATAAAACATTTCTATTTAATGA

hide sequence

RefSeq Acc Id:

XM_008001918 ⟹ XP_008000109

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	8	138,570,461 - 138,573,072 (+)	NCBI
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,290,258 (-)	NCBI

Sequence:

show sequence

CATGCGGGGGGCGGGCCCGGAGTCGCGGCGGCTAGAAGAGGTCTTCAGTTCCCAGAAGAGCCAA
AGCGTCTCTGGACCTAGGTGGGAAAAGAACTGGCTGTGACCTTTGCCTTGACCTGGAAGGGCGC
AGCCTTGGACTGAATGGCAGCACCCACACCCGGCCGTCCGGTGCTGACCCACCTGCTGGTGGCT
CTCTTTGGCATGGGCTCCTGGGCTGCGGTCAATGGGATCTGGGTGGAGCTACCTGTGGTGGTCA
AAGAGCTTCCGGAGGGTTGGAGTCTCCCCTCCTACGTCTCTGTGCTTGTGGCGCTGGGGAACCT
GGGTCTGCTGGTGGTGACCCTTTGGAGGCGGCTGGCCCCAGGAAAGGGCGAGCGGGTCCCCATC
CGGGTGGTGCAGGTGCTGAGCATGGTGGGCACAGCTCTCCTGGCCTTTCTGTGGCACCACGTGG
TCCTAGTGGCAGGACAGTTGCATTCTGTGGCCTTCTTAGCACTGGCCTTTGTGTTGGCGCTGGC
ATGCTGTGCCTCTAATGTCACTTTCCTGCCCTTCCTGAGCCACCTGCCACCTCGCTTCTTACGG
TCATTCTTCCTGGGTCAAGGCCTGAGTGCCCTGCTGCCCTGCGTGCTGGCCCTAGTGCAGGGTG
TGGGCCGCTTTGAGTGCCCGCCAGCCCCCATCAACGGCACCCCCGGCCCCCCACTCGACTTCCC
TGAGCGTTTTCCCGCCAGCACCTTCTTCTGGGCACTGACTGCCCTTTTGGTCACTTCAGCTGCT
GCCTTTCAGGGTCTCCTGGTGCTGTTGCCACCACCATCTGTACCCACAGGGGTCTTAGGATCAG
GCCTCCAGGTGGGAGCCCCAGGAGCAGAGGAAGAGGTGGAAGAGGCCTCACCATTGCAAGAGCC
ACCAAGCCAGGCAGCAGGCACCACCCCTGGTCCAGACCCTAAGGCCTATCAGCTTCTCTCAGCC
CACAGTGCCTGCCTGCTGGGCCTGTTGGCCGCCACCAATGCACTGACCAACGGCGTGCTACCTG
CTGTGCAGAGCTTTTCCTGCTTACCCTACGGGCGTCTGGCCTACCACCTGGCTGTGGTGCTGGG
CAGTGCTGCCAATCCCCTGGCCTGCTTCCTGGCCATGGGTGTGCTGTGCAGATCCTTGGCAGGG
CTGGGCGGCCTCTCTCTGCTGGGCGTGCTCTTTGGGGGCTACCTGATGGCGCTGGCAGTCCTGA
GCCCCTGCCCGCCCCTGGTGGGCACCTCGGCAGGGGTGGTCCTCGTGGTGCTGTCGTGGGTGCT
GTGTCTTGGCGTTTTCTCCTACGTGAAGGTGGCAGCCAGCTCCCTGCTGCATGGCGGGGGCGGG
CCGGCATTGCTGGCAGCCGGTGTGGCCATCCAGGTGGGCTCTCTGCTCGGCGCTGTTGCTATGT
TCCCCCCCACCAGCATCTATCACGTGTTCCACAGCAGAAAGGACTGTGCAGACCCCTGTGACTC
CTGAGCCTGGGCAGGTGGGGACCCCGCTCCCCGACGCCTGTCTTTCCCTCAATGCTACCACCAT
GCCTGAGTGCCTGCAGCCCAGGAGGCCCGCACACCGGTACACTCGTGGACACCTGCGCACTCCA
TAGGAGACCCTGGCTCTCCGGGGCGGGGGGAAAGGGCAGGGAGCAGGCTTGGAGCCAGGGACCG
GTGGGGGCTGTAGGGTAAGCCCCTGAGCCTAGGACCTACGTGTGGTTTGCGTAATAAAACATTT
CTATTTAATGA

hide sequence

RefSeq Acc Id:

XM_037999973 ⟹ XP_037855901

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,290,261 (-)	NCBI

RefSeq Acc Id:

XM_037999974 ⟹ XP_037855902

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,290,261 (-)	NCBI

RefSeq Acc Id:

XM_037999975 ⟹ XP_037855903

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,290,261 (-)	NCBI

RefSeq Acc Id:

XM_037999976 ⟹ XP_037855904

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666039	1,287,635 - 1,289,921 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_008000106	(Get FASTA)	NCBI Sequence Viewer
	XP_008000107	(Get FASTA)	NCBI Sequence Viewer
	XP_008000108	(Get FASTA)	NCBI Sequence Viewer
	XP_008000109	(Get FASTA)	NCBI Sequence Viewer
	XP_037855901	(Get FASTA)	NCBI Sequence Viewer
	XP_037855902	(Get FASTA)	NCBI Sequence Viewer
	XP_037855903	(Get FASTA)	NCBI Sequence Viewer
	XP_037855904	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000004781
	ENSCSAP00000004781.1

RefSeq Acc Id:	XP_008000108 ⟸ XM_008001917
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R842 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008000109 ⟸ XM_008001918
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R842 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008000106 ⟸ XM_008001915
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R842 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008000107 ⟸ XM_008001916
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R842 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000004781 ⟸ ENSCSAT00000006577

RefSeq Acc Id:	XP_037855901 ⟸ XM_037999973
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R842 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_037855903 ⟸ XM_037999975
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_037855902 ⟸ XM_037999974
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_037855904 ⟸ XM_037999976
- Peptide Label:	isoform X4

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000008519	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000006577.1	UniProtKB/TrEMBL
InterPro	Riboflavin_transptr	UniProtKB/TrEMBL
KEGG Report	csab:103237620	UniProtKB/TrEMBL
NCBI Gene	SLC52A2	ENTREZGENE
PANTHER	PTHR12929	UniProtKB/TrEMBL
	SOLUTE CARRIER FAMILY 52, RIBOFLAVIN TRANSPORTER, MEMBER 2	UniProtKB/TrEMBL
Pfam	DUF1011	UniProtKB/TrEMBL
UniProt	A0A0D9R842	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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