Gene: RHO (rhodopsin) Chlorocebus sabaeus

Analyze

Symbol:

RHO

Name:

rhodopsin

RGD ID:

18365635

Description:

ENCODES a protein that exhibits retinal binding (ortholog); spectrin binding (ortholog); INVOLVED IN absorption of visible light (ortholog); cellular response to light stimulus (ortholog); detection of light stimulus (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH blindness (ortholog); cataract (ortholog); Coats disease (ortholog); FOUND IN photoreceptor outer segment (ortholog); photoreceptor outer segment membrane (ortholog); rough endoplasmic reticulum membrane (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RHO (rhodopsin)	NCBI	Ortholog
Mus musculus (house mouse):	Rho (rhodopsin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Rho (rhodopsin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rho (rhodopsin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RHO (rhodopsin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RHO (rhodopsin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rho (rhodopsin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RHO (rhodopsin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rho (rhodopsin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Rho (rhodopsin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mChlSab1.0.hap1	22	48,989,026 - 48,997,756 (+)	NCBI		mChlSab1.0.hap1
Vero_WHO_p1.0	NW_023666041	114,957,244 - 114,963,876 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0
ChlSab1.1	22	51,513,611 - 51,520,589 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	51,515,081 - 51,519,974 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

blindness (ISO)

cataract (ISO)

Coats disease (ISO)

colon cancer (ISO)

cone-rod dystrophy (ISO)

congenital hypomyelinating neuropathy 2 (ISO)

congenital stationary night blindness (ISO)

congenital stationary night blindness autosomal dominant 1 (ISO)

fundus albipunctatus (ISO)

fundus dystrophy (ISO)

genetic disease (ISO)

night blindness (ISO)

optic disk drusen (ISO)

pathologic nystagmus (ISO)

retinal degeneration (ISO)

retinal detachment (ISO)

retinal disease (ISO)

retinitis pigmentosa (ISO)

retinitis pigmentosa 4 (ISO)

uterine corpus endometrial carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

absorption of visible light (IEA,ISS)

cellular response to light stimulus (ISO)

detection of light stimulus (ISO)

detection of temperature stimulus involved in thermoception (ISO)

G protein-coupled opsin signaling pathway (ISO)

G protein-coupled receptor signaling pathway (IEA)

gene expression (ISO)

microtubule cytoskeleton organization (ISO)

negative regulation of opsin-mediated signaling pathway (ISO)

photoreceptor cell maintenance (ISO)

phototransduction (IEA,ISO)

podosome assembly (ISO)

protein phosphorylation (ISO)

red, far-red light phototransduction (ISO)

response to light intensity (ISO)

response to light stimulus (ISO)

retina development in camera-type eye (ISO)

rod bipolar cell differentiation (ISO)

sensory perception of light stimulus (ISO)

signal transduction (IEA)

thermotaxis (ISO)

visual perception (IEA,ISO)

Cellular Component

cell-cell junction (IEA)

ciliary membrane (IEA)

Golgi apparatus (IEA)

membrane (IEA)

photoreceptor disc membrane (IEA)

photoreceptor inner segment (IEA)

photoreceptor inner segment membrane (IEA)

photoreceptor outer segment (IEA,ISO)

photoreceptor outer segment membrane (IEA,ISO)

plasma membrane (IEA)

rod photoreceptor disc membrane (IEA)

rough endoplasmic reticulum membrane (ISO)

sperm head plasma membrane (IEA)

sperm midpiece (IEA)

Molecular Function

G protein-coupled receptor activity (IEA)

retinal binding (ISO)

spectrin binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

altered visual phototransduction pathway (ISO)

retinitis pigmentosa pathway (ISO)

retinoid cycle metabolic pathway (ISO)

visual phototransduction pathway (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

RHO
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mChlSab1.0.hap1	22	48,989,026 - 48,997,756 (+)	NCBI		mChlSab1.0.hap1
Vero_WHO_p1.0	NW_023666041	114,957,244 - 114,963,876 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0
ChlSab1.1	22	51,513,611 - 51,520,589 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	51,515,081 - 51,519,974 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

RHO
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	129,528,639 - 129,535,344 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	129,528,637 - 129,535,344 (+)	Ensembl		GRCh38.p14 Ensembl	hg38	GRCh38
GRCh37	3	129,247,482 - 129,254,187 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	130,730,172 - 130,736,877 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	3	130,730,179 - 130,736,885	NCBI
Celera	3	127,674,318 - 127,681,023 (+)	NCBI		Celera
Cytogenetic Map	3	q22.1	NCBI
HuRef	3	126,630,783 - 126,637,404 (+)	NCBI		HuRef
CHM1_1	3	129,210,611 - 129,217,316 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	132,273,081 - 132,279,773 (+)	NCBI		T2T-CHM13v2.0

Rho
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	115,903,741 - 115,916,999 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	115,908,709 - 115,916,997 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	115,926,754 - 115,940,038 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	115,931,748 - 115,940,036 (+)	Ensembl		GRCm38.p6 Ensembl	mm10	GRCm38
MGSCv37	6	115,881,945 - 115,888,848 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	115,897,546 - 115,904,449 (+)	NCBI		MGSCv36	mm8
Celera	6	117,767,245 - 117,774,151 (+)	NCBI		Celera
Cytogenetic Map	6	E3	NCBI
cM Map	6	53.72	NCBI

Rho
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	150,653,205 - 150,658,367 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	150,653,205 - 150,658,367 (+)	Ensembl				GRCr8
mRatBN7.2	4	148,975,597 - 148,988,693 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	148,980,611 - 148,985,773 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	155,209,107 - 155,214,199 (+)	NCBI	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	150,993,130 - 150,998,222 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	149,616,029 - 149,621,121 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	4	152,841,675 - 152,846,767 (+)	NCBI
Lyon_Normotensive	4	150,490,789 - 150,495,881 (+)	NCBI
Lyon_Hypertensive	4	150,973,850 - 150,978,942 (+)	NCBI
F344_StmMcwi	4	150,316,657 - 150,321,749 (+)	NCBI
Rnor_6.0	4	147,832,136 - 147,837,298 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	147,832,136 - 147,837,298 (+)	Ensembl		Rnor_6.0 Ensembl	rn6	Rnor6.0
Rnor_5.0	4	211,115,847 - 211,121,009 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	152,057,788 - 152,062,950 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	137,870,273 - 137,875,435 (+)	NCBI		Celera
RGSC_v3.1	4	152,302,628 - 152,307,791 (+)	NCBI
Cytogenetic Map	4	q42	NCBI

Rho
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	17,787,337 - 17,791,982 (-)	Ensembl		ChiLan1.0 Ensembl
ChiLan1.0	NW_004955429	17,787,337 - 17,791,982 (-)	NCBI	ChiLan1.0	ChiLan1.0

RHO
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	127,461,364 - 127,471,171 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	127,466,088 - 127,473,896 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	126,586,510 - 126,593,028 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	133,938,419 - 133,944,928 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	133,938,419 - 133,944,928 (+)	Ensembl		PanPan1.1 Ensembl	panPan2	panpan1.1

RHO
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	5,630,735 - 5,638,906 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	5,669,643 - 5,674,903 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	5,661,948 - 5,667,219 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	5,661,632 - 5,667,315 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	5,377,793 - 5,383,047 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	5,730,818 - 5,736,090 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	5,706,443 - 5,711,705 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rho
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mIctTri1.hap1	16	38,778,621 - 38,784,630 (-)	NCBI		mIctTri1.hap1
HiC_Itri_2	NW_024404942	18,008,183 - 18,014,175 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936602	894,617 - 901,664 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936602	896,730 - 901,480 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RHO
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	68,908,578 - 68,913,651 (+)	Ensembl		Sscrofa11.1 Ensembl	susScr11	Sscrofa11.1
Sscrofa11.1	13	68,908,578 - 68,913,651 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	76,135,867 - 76,140,946 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Rho
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624872	523,892 - 528,278 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2
HetGla_female_1.0 Ensembl	NW_004624872	523,912 - 527,615 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl	8	14,380,844 - 14,384,720 (+)	Ensembl

Rho
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	30,793,145 - 30,798,434 (-)	NCBI	Rrattus_CSIRO_v1	Rrattus_CSIRO_v1

Variants

Variants in RHO
106 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
35	24	18	22	22	31	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007985378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JBLKOC010000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000007142 ⟹ ENSCSAP00000005330

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	22	51,515,081 - 51,519,974 (-)	Ensembl

RefSeq Acc Id:

XM_007985378 ⟹ XP_007983569

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
mChlSab1.0.hap1	22	48,989,026 - 48,997,756 (+)	NCBI
Vero_WHO_p1.0	NW_023666041	114,957,244 - 114,963,876 (+)	NCBI
ChlSab1.1	22	51,513,611 - 51,520,589 (-)	NCBI

Sequence:

show sequence

GCAGGATGCGGCCCCTGCCCTCATGGAGCTCCTCCTGTCAGAGGAGTGTGGGGACTGGACGAGC
CCAGAAGTAACTTGCGGGGGAACGAACAGGTAAGGGGCTGTGTGACGAGATGAGAGACTGGGAG
AATAAACTAGAAAGTCTCTCGCTGTCCAGAAGCTCACTGTCCAGTCCAGACGAAGATCTGAAGT
CAGCTCGTACTAAGCCAAGGGAAATGGCACAGACACCCACGGTCCCTATTTCAGACCAAGGCCA
CCAGACTGAGCTGGGACCTTGGGACAGACAAGCCATGTAGAAGTTAGGGGCCTTCTCCCTTTCC
CAGGGTCCTGAGTACCTCTCCTCCCTGACCTCAGGCTTCCTCCTGGTGTCACCTTGGCCCCTCT
TGGAAGCCAATTAGGCCCTCAGTTTCTGCAGCGGGATTAATATGATTATGAACACCCCCAATCT
CCCAGATGCTGATTCAGCCAGGAGCTTAGGAGGGGGAGGTCACTTTATAAGGGTCTGGGGGGGT
GAGAGCCCAGAGTCATCCAGTCGGGGCCCTGAGTGGCTGAGCTCAGGCCTTTGCAACATTCTTG
GGTGGGAGCAGACGCGGGGCAGCCACAAGGGCCACAGCCATGAATGGCACGGAAGGCCCTAACT
TCTACGTGCCCTTCTCCAACGCGACGGGCGTGGTGCGCAGCCCCTTCGAGTACCCGCAGTACTA
CCTGGCCGAGCCATGGCAGTTCTCCATGCTGGCCGCCTACATGTTCCTGCTGATCGTGCTGGGC
TTCCCCATCAACTTCCTCACGCTCTACGTCACCGTCCAGCACAAGAAGCTGCGCACGCCTCTCA
ACTACATCCTGCTCAACCTAGCCGTGGCCGACCTCTTCATGGTCTTCGGTGGCTTCACCAGCAC
CCTCTACACATCTCTGCATGGATACTTCGTCTTCGGGCCCACAGGATGCAATGCGGAGGGCTTC
TTTGCCACCCTGGGCGGTGAAATCGCCCTGTGGTCCTTGGTGGTCCTGGCCATCGAACGGTACG
TGGTGGTGTGTAAGCCCATGAGCAACTTCCGCTTCGGGGAGAACCATGCCATCATGGGCGTTGC
CTTCACTTGGGTCATGGCGCTGGCCTGCGCCGCACCCCCCCTCTTCGGCTGGTCCAGATACATC
CCCGAGGGCTTGCAGTGCTCGTGCGGAATCGACTACTACACGCTCAAGCCAGAGGTCAACAACG
AGTCCTTTGTTATCTACATGTTTGTGGTCCACTTCACCATCCCCATGATTGTCATCTTCTTCTG
CTACGGGCAGCTCGTCTTCACCGTCAAGGAGGCCGCTGCCCAGCAGCAGGAGTCAGCCACCACA
CAGAAGGCAGAGAAGGAGGTCACTCGCATGGTCATCATCATGGTCATCGCTTTCCTGATCTGCT
GGGTGCCCTATGCCAGCGTGGCATTCTACATCTTCACCCACCAGGGCTCCAACTTCGGTCCCAT
CTTCATGACCATCCCAGCGTTCTTTGCCAAGAGCGCCGCCATCTACAACCCTGTCATCTATATC
ATGATGAACAAGCAGTTCCGGAACTGCATGCTCACCACCATCTGCTGCGGCAAGAACCCGCTGG
GTGACGATGAGGCCTCTGCCACCGTGTCCAAGACGGAGACTAGCCAGGTGGCCCCGGCCTAAGA
CCTGCCTAGGACGCTGTGGCCAACTGTAGACGTCTCCCGTCCCCCACACCCTCCCCCAGCCACA
GCCATCCCACCAGGAGCAGCGCCTGTGCAGAATGAACGAAGTCACATAGGCTCCTTCATTTTTT
TTTTTTTTTTAAGAAATAATTAATGAGAGAAAAATGAGGCTCCTCACTCACCCGGGACAGCCTG
AGAAGGGACATCCACCAACACCTACTGATCTGGAGTCCCAGGTTCCCCAAGGCCAGCGGGATCT
GTGCCCCTCCTCCTCCCAACTCATCTTTCAGGAACACAAGGATTCTTGCTTTCTGGAAAAGTGT
CCCAGCTTAGGGATAAGTGTCTAGCACAGAATGGGGCACACAGTAGGTGCTTAATAAATGCTGG
ATGGATGCAGGAAGGGAGGAATGAAAGCGAAGGGAGAACATATCTATCCTCTCAGACCCTCTTA
GCAGCAGCAACTCATACTTGGCTAATGATAAGGAGCAGTTGTTTTTCCCTCCCTGGGCCTCACT
TTCTTCCCCTATAAAATGGAAATCCCAGATTCCTGGTCCTGCCGACACGCAGCTACTGAGAGGA
CCAAAAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTTTCAGCATGTTGTAAAT
AGCAAGAGCTGTACAGATTCTAGTTCATGTTGTGAATAACATCAATTAATGTAACTAGTTAATT
ATTATGATTATCACCTCCTGATTGTGAACATTCTGAGACTGGGCATTCGGATGATGGGGTTTCA
CCCAGCCTCGGGGCAGGTTTTTAAAAATTAGCTAGGCGTCAAGGCCAGACCAGGGCTGGGGCTG
GGCTGCAGGCAAGGACAGTCACAGGAATGCAGAATGCAGTCATCACATCTGAAAAAACAACATT
GGGGGAGTGGGGCGATGAAGGCCAAGTTCTCAGTGAGGGTGAGATTGGGCCTGGGGTATCACCC
CTACTGTGAGGCCCCAGACCCCGTGCCTCCCCTTCCCAGTGTGGCTTATGGAGAGACGGGCCTT
TCTCTCAGCCTCTAGAAGTTACCTGCTCTTTTGCCCTAGCACCTGGGCCCCAGCATCTAGAGCA
TGGAGCCTCTAGAAGATACGCTCACCGGCCCACATTTAATGAACAGCTGAGTCCCTGATGTCAT
CCTTATCTCAAAGAGCTTAGAAACAAAGAGTGGGAAATTCCACTGGGCCCACCTTCCCTGGGGA
TGTTCATGGGCCCCCGTTTCCAGTTTCCCTTGCCAGACAAGCCCATCTTCAGCAGTTGCTAGTC
GATTCTCCATTCTGGAGAGTCTGCTCCAGAAAGCTGGCCACATCTCTGAGGTGTCAAAATTGAG
CTGCCTCAGTAACTGCTCCCCCCTCTCCATATAGGCAAAGCCAGAAGCTCTAGCTTTACCCAGC
TTTGCCTGGAGACTAAGGCAAATTGGGCCATTGAAAGCTCAGCTCCTATGTTGGTATTAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_007983569	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000005330
	ENSCSAP00000005330.1

RefSeq Acc Id:	XP_007983569 ⟸ XM_007985378
- UniProtKB:	A0A0D9R9P1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000005330 ⟸ ENSCSAT00000007142

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000009088	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000007142.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_opsins	UniProtKB/TrEMBL
	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	Opsin	UniProtKB/TrEMBL
	Retinal_BS	UniProtKB/TrEMBL
	Rhodopsin	UniProtKB/TrEMBL
	Rhodopsin_N	UniProtKB/TrEMBL
KEGG Report	csab:103228066	UniProtKB/TrEMBL
NCBI Gene	RHO	ENTREZGENE
PANTHER	OPSIN	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
	Rhodopsin_N	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	OPSIN	UniProtKB/TrEMBL
	RHODOPSIN	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
	OPSIN	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	A0A0D9R9P1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations