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Gene: A430033K04Rik (RIKEN cDNA A430033K04 gene) Mus musculus

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Symbol:

A430033K04Rik

Name:

RIKEN cDNA A430033K04 gene

RGD ID:

1622034

MGI Page

MGI

Description:

Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in regulation of osteoblast differentiation. Acts upstream of or within negative regulation of DNA-templated transcription. Located in nucleus. Is expressed in early conceptus; inner cell mass; and oocyte.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

C86988; expressed sequence C86988; hypothetical protein LOC243308; ObI-1; ObI1; osteoblast inducer-1; uncharacterized protein LOC243308; zinc finger protein OBI1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	138,621,121 - 138,647,179 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	138,621,121 - 138,650,676 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	138,622,859 - 138,648,917 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	138,622,859 - 138,652,414 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	139,064,087 - 139,090,066 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	138,852,682 - 138,878,545 (+)	NCBI		MGSCv36	mm8
Celera	5	135,686,944 - 135,712,909 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	77.1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

4,4'-sulfonyldiphenol (ISO)

all-trans-retinoic acid (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

formaldehyde (ISO)

phenylmercury acetate (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sunitinib (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of DNA-templated transcription (IDA)

regulation of osteoblast differentiation (IMP)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

nucleus (IBA,IDA)

Molecular Function

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

protein binding (ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IBA)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10725249	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11544199	PMID:12466851	PMID:12477932	PMID:15618518	PMID:16141072
PMID:16141073	PMID:18799693	PMID:20059953	PMID:20412781	PMID:21873635	PMID:25827285	PMID:30654721

Genomics

Comparative Map Data

A430033K04Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	138,621,121 - 138,647,179 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	138,621,121 - 138,650,676 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	138,622,859 - 138,648,917 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	138,622,859 - 138,652,414 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	139,064,087 - 139,090,066 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	138,852,682 - 138,878,545 (+)	NCBI		MGSCv36	mm8
Celera	5	135,686,944 - 135,712,909 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	77.1	NCBI

ZNF649
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	51,889,235 - 51,905,017 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	51,889,235 - 51,905,040 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	52,392,488 - 52,408,270 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	57,084,300 - 57,100,059 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	19	49,442,054 - 49,457,871 (-)	NCBI		Celera
Cytogenetic Map	19	q13.41	NCBI
HuRef	19	48,723,139 - 48,738,956 (-)	NCBI		HuRef
CHM1_1	19	52,394,327 - 52,410,144 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	54,976,430 - 54,992,212 (-)	NCBI		T2T-CHM13v2.0

ZNF649
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	57,856,619 - 57,947,000 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	59,856,022 - 59,871,319 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	48,829,464 - 48,847,569 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	57,709,867 - 57,726,388 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	57,709,867 - 57,726,388 (-)	Ensembl	panpan1.1		panPan2

LOC100625694
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	58,217,487 - 58,232,742 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	58,217,468 - 58,231,765 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	51,958,771 - 51,972,871 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF649
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	44,710,477 - 44,720,702 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	44,710,838 - 44,717,364 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	24,753,157 - 24,800,713 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in A430033K04Rik
1755 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	489
Count of miRNA genes:	356
Interacting mature miRNAs:	394
Transcripts:	ENSMUST00000032590, ENSMUST00000069862
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
27226719	Tibw6_m	tibia width 6, proximal, 16 week (mouse)					5	72857343	139985755	Mouse
1301363	Pbwg13_m	postnatal body weight growth 13 (mouse)			Not determined		5	125133457	151758149	Mouse
1301715	Elmaz2_m	elevated maze behavior 2 (mouse)			Not determined		5	125178229	141700466	Mouse
1301362	Prnr1_m	prion resistance 1 (mouse)			Not determined		5	89418876	146787935	Mouse
10412191	Bbaa24_m	B.burgdorferi-associated arthritis 24 (mouse)			Not determined		5	119945037	141700466	Mouse
1300913	Bwefm_m	body weight females and males day 10 (mouse)			Not determined		5	109439348	143439459	Mouse
13464143	Bbaa2b_m	B.burgdorferi-associated arthritis 2b (mouse)					5	133052969	140709801	Mouse
4141081	Nidd7k_m	Nidd7 on KK-A (mouse)			Not determined			119945037	149347326	Mouse
11528552	Scram1_m	spinal cord resistance to astrocytoma modifier 1 (mouse)					5	121455402	151758149	Mouse
1300827	Cora1_m	correlation in cytokine production 1 (mouse)			Not determined		5	115156883	149157015	Mouse
10043890	Trigq4_m	triglyceride QTL 4 (mouse)			Not determined		5	107906299	141906412	Mouse
1302079	Lbw3_m	lupus NZB x NZW 3 (mouse)			Not determined		5	124700335	151758149	Mouse
10412239	Alpq7_m	alcohol preference QTL 7 (mouse)			Not determined		5	104705939	138705939	Mouse
1301986	Bpq4_m	blood pressure QTL 4 (mouse)			Not determined		5	121555236	151758149	Mouse
1301857	Bglq14_m	body growth late QTL 14 (mouse)			Not determined		5	118948964	151758149	Mouse
12880406	Jcdq2_m	joint cartilage degeneration QTL 2 (mouse)					5	129787831	151758149	Mouse
1301543	Hypch_m	hypercholesterolemia (mouse)			Not determined		5	109238624	139118905	Mouse
4142473	Chlq11_m	circulating hormone level QTL 11 (mouse)			Not determined		5	107906299	141906412	Mouse
13464251	Ahl21_m	age related hearing loss, early onset 21 (mouse)					5	109167240	143167381	Mouse
1301226	Bbaa2_m	B.burgdorferi-associated arthritis 2 (mouse)			Not determined		5	115156883	149157015	Mouse
10412197	Bbaa25_m	B.burgdorferi-associated arthritis 25 (mouse)			Not determined		5	109167240	143167381	Mouse
4141218	Ath24_m	atherosclerosis 24 (mouse)			Not determined			129520084	151758149	Mouse
11049557	Lmr26_m	leishmaniasis resistance 26 (mouse)					5	133925558	151758149	Mouse
13464243	Ahl20_m	age related hearing loss, early onset 20 (mouse)					5	107906299	141906412	Mouse

Markers in Region

C86988

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	138,647,521 - 138,647,753	UniSTS	GRCm38
MGSCv37	5	139,088,670 - 139,088,902	UniSTS	GRCm37
Celera	5	135,711,588 - 135,711,820	UniSTS
Cytogenetic Map	5	G2	UniSTS
Whitehead/MRC_RH	5	1675.47	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_183025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC125115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC242503	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI842993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK009353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK039936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK131909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK131916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC055299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM229635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000032590 ⟹ ENSMUSP00000032590

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	138,621,121 - 138,639,085 (+)	Ensembl
GRCm38.p6 Ensembl	5	138,622,859 - 138,640,823 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000069862 ⟹ ENSMUSP00000067316

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	138,621,156 - 138,647,098 (+)	Ensembl
GRCm38.p6 Ensembl	5	138,622,894 - 138,648,836 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000198958 ⟹ ENSMUSP00000142904

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	138,621,138 - 138,650,676 (+)	Ensembl
GRCm38.p6 Ensembl	5	138,622,876 - 138,652,414 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000200521 ⟹ ENSMUSP00000143566

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	138,621,121 - 138,639,085 (+)	Ensembl
GRCm38.p6 Ensembl	5	138,622,859 - 138,640,823 (+)	Ensembl

RefSeq Acc Id:

NM_183025 ⟹ NP_898846

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	138,621,121 - 138,647,179 (+)	NCBI
GRCm38	5	138,622,859 - 138,648,917 (+)	ENTREZGENE
MGSCv37	5	139,064,087 - 139,090,066 (+)	RGD
Celera	5	135,686,944 - 135,712,909 (+)	RGD
cM Map	5		ENTREZGENE

Sequence:

show sequence

GTCTGGGACCCTCCATATTGGAATCACTGTATGCTGCTAGGGAAGCTGTTGCTCAGCTTCGGTG
GCGCGGTGACGCTGTAAGTGCTGGGCGATGGTGAGAAGACGCCAGCGGCTCCCAGAAGTGGACA
TGGGGTTGGTGTCATTTGAAGACGTAGCAGTGGACTTCACTTGGCAGGAATGGCAGGAGCTGGA
TGCTGCTCAGAGGACCCTCTACAGGGACGTGATGCTGGAGAACTATAGGAGCCTGGTGTGGCTG
GGGCACTGTTTAGCCAAACCTGAGTTGATCTCCAAGTTGGAAGAAGGATTTGAACCGTGGGGTG
TTGCAGAAGCCACAGAGCAGTGCCTACCAGGTGTCCGTAAATGGAGTGCCCCAGTTGAAAAAGG
CCAGCAAAGTCAAGAGAAGTATTTGAGGCAAGTCAAAATCATCAAGAAAAATACACCAGATGAA
GATAAGGTTGAAGTAGAAAACACATACAATGTGGACTCAAACTGCATTTCAAATATGACTCTGA
AGAATGAAGTCTGTTCTAGAGTGTTCTTTCAGGAGCTTGTTAATCCATTGCTAGATGTACCTTT
GCCTACTGAGGCTGGCGAGAGGCAGAGTACAGAAGTACCTCATGATCTGAATAGAACTCAGGAA
GTTCTCTCATATCCCAAGCATTTCACTCACCATAGCAAGGATCAGTATTCACAGTGTTGTTTTC
AGTACTTTGGACCAGATGAAGCCTTCCACACAAAAGCAATATTAACACCTGAGATGTTTTATGT
TCAGGAAACCTCTAGGACATGCAATAACTATGATAAATCCTTTGATGAGGTAACAATTCCTGCC
CAATATATGACTCAGTTAAGAAAGCAAACTTTGGGATGGAATATATGTCATAAAATATTCCCTA
ACAAGACCGAACTTAGCAACCATGACGCTATGCACACTGGAGAGAATGATGATAAATGTGATTA
CGAGAAGCCTATCATTAACAAGTCATTATACCTTACAAAACATCAGGAAGCACATGCAGGGATA
GAGCCCCAAGCACACAAAGAAAACATCAAATTCTTCTGCCTAGATGCCGAGCTGCAAACAGTTG
ATCCAGAACTTCACGGAGAGAAACAAGTTTACGAATGTAAAGTATCAGGGAAAACCTTCCGCCA
CCAGCCAGAGCACATCAGCCAACAGAGACCACACGCCTGTGAGAGAGCCTGCCAGGCTAAGGAA
CATGGGGAAGCTGGCTGTGATGAGCCAGCCCTCACCCAACACCAGAGACTTTGTACAGAGGAGA
AGGCCTGTGAGGGGAAAGCATGCAGCAAGGCTTTCCACCACAAGTCACTGCTGCCTCAGTATCA
GAGCGCTCGCGCAGATGAACAGCAAAGTGACTGCAAAGAATTAATGAAAATTTACTTCTACGTT
TCAAGCCCCACGCAGCATCACGGACCTCCTCCTCCTGAGAAACCTTTCAGGTGTAATGATTGTC
TGAAGACTTTCTCCCACAAGTCACAGCTCGAGCGACATCAGAGAATGCACACAGGGGAGAAACC
CCATGAATGCAAAGAATGCAGGAAAGCCTTCTGTCACAAGTCCCACTTAATCCGGCATCAGGGA
ATCCATGCGCCTGAGAAACCCTACGAATGTAACGAATGTAAGAAATCTTTCTACCTGAGGTCAC
AGCTCACTCTACATGAGAGGACGCACACCGGGGAGAAGCCCTTCGAGTGTAAAGAATGCCGGAA
AGCTTTCTCCCGTAATTCACACCTCACTCAACATCAGAAGATTCATACAGGGGAGAAGCCACAT
AAGTGTAAAGAATGTGGGAATGCGTTTGCCCGCAAGTCACATCTCATTCAGCATCAGAAAACCC
ACACAGGGGAGAGGCCCTATGAATGTAAAGAGTGCAGGAAAGCTTTCTCTCGTAAGTCCCAACT
GATGCAGCACGAGACAACTCACACTGGTGAGAGAGCCTACGAATGCAAAGAATGCAGGAAGACT
TTCTATCTCAAGGCGTACCTCACTCGCCACCAGGTAATCCATCAGTCTGAAAAGCCGTTTGAAT
GTAAGAAATGCGGGAAAGCTTTCTCTCGGAAGTCATACCTCACACGACATCAGAAGATACACAA
AGGTCAAACCCTATCTGGGTAAGAAACTTTAGGGATGTAAACGATGGAGAAGGTTCTTAAGCTA
GTTGGACTTAACAGGTGAGAAGCCCCATGCGTGTAGGAAAATGTGCTATTGTTACGTCTTGGCT
GACATCAGAAATCCCATGCTAGTAATGAACAAATGGAAAAGTGTGAAAGAAAGCTTTGCACAGG
AGTTATGTCTCACTATAGGTCAGTGAGTATGCCAGTGAGAAGCCATGGGAAATGCAGGGATGCT
GTGTTTAAGTTACACCTCATCATACATTCGTAAATGTATACAAGTGAGAAACCCTGTGACTATA
AAGGATGTAGTAGAGCTGCCTGAGAACTTATAACTGCCATTTAAGTTTCAATAACAAGGGAAAT
TTTTCAACAAGGGAGACCCCACCGCCTGACAGAAAACTCCCACCGGTGATAAGCCGCGCTCATC
TAGGGGAGTTGAGCGCCTGGCAAGTAAGGACTCCCATGAGTGTAAATGATGCTGAGATGTTTCA
AGGAGCGCTTGCTTTTCATCTCTGCTCTCTTAGTGTTGCTGCTTACATCTCACTCATACTGAGA
CAAAGCTAGCCTGGACGACAGAGTAATACACCTGAGGCAAAGCTAGCCTGGACGACAGAGTAAT
ACACCTGAGACAAGGCTAGCCTGGACAATGGAGTTATACACCTATCTTTTTTTTTTTCTTGAGA
CTAGATTTCCCTGTGTAGACCAGGCTAGTTTCAGACTCATGGACACTGACCCTCTGCCTCTGCC
TCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTG
CCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCTCTCCTCACAAGTACTTGGAT
TAAAGGCATATGCTACCACACCTGGCTTGTAGTAAGATGTTTTTAATAAAGAAGGTTCAGTCAA
ACTGTATTGGACACTCTCCTTATAGGATATGAGAAACACACCCGTTTGGAACCATATGTAAGTA
TTCTAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_898846	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH55299	(Get FASTA)	NCBI Sequence Viewer
	BAE20422	(Get FASTA)	NCBI Sequence Viewer
	BAE20867	(Get FASTA)	NCBI Sequence Viewer
	BAE20871	(Get FASTA)	NCBI Sequence Viewer
	E9Q8G5	(Get FASTA)	NCBI Sequence Viewer
	EDL19184	(Get FASTA)	NCBI Sequence Viewer
	EDL19185	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000067316
	ENSMUSP00000067316.8
	ENSMUSP00000142904.2
	ENSMUSP00000143566.2

RefSeq Acc Id:

NP_898846 ⟸ NM_183025

- UniProtKB:

E9Q8G5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVRRRQRLPEVDMGLVSFEDVAVDFTWQEWQELDAAQRTLYRDVMLENYRSLVWLGHCLAKPEL
ISKLEEGFEPWGVAEATEQCLPGVRKWSAPVEKGQQSQEKYLRQVKIIKKNTPDEDKVEVENTY
NVDSNCISNMTLKNEVCSRVFFQELVNPLLDVPLPTEAGERQSTEVPHDLNRTQEVLSYPKHFT
HHSKDQYSQCCFQYFGPDEAFHTKAILTPEMFYVQETSRTCNNYDKSFDEVTIPAQYMTQLRKQ
TLGWNICHKIFPNKTELSNHDAMHTGENDDKCDYEKPIINKSLYLTKHQEAHAGIEPQAHKENI
KFFCLDAELQTVDPELHGEKQVYECKVSGKTFRHQPEHISQQRPHACERACQAKEHGEAGCDEP
ALTQHQRLCTEEKACEGKACSKAFHHKSLLPQYQSARADEQQSDCKELMKIYFYVSSPTQHHGP
PPPEKPFRCNDCLKTFSHKSQLERHQRMHTGEKPHECKECRKAFCHKSHLIRHQGIHAPEKPYE
CNECKKSFYLRSQLTLHERTHTGEKPFECKECRKAFSRNSHLTQHQKIHTGEKPHKCKECGNAF
ARKSHLIQHQKTHTGERPYECKECRKAFSRKSQLMQHETTHTGERAYECKECRKTFYLKAYLTR
HQVIHQSEKPFECKKCGKAFSRKSYLTRHQKIHKGQTLSG

hide sequence

Ensembl Acc Id:

ENSMUSP00000142904 ⟸ ENSMUST00000198958

Ensembl Acc Id:

ENSMUSP00000032590 ⟸ ENSMUST00000032590

Ensembl Acc Id:

ENSMUSP00000067316 ⟸ ENSMUST00000069862

Ensembl Acc Id:

ENSMUSP00000143566 ⟸ ENSMUST00000200521

Protein Domains

C2H2-type KRAB

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-E9Q8G5-F1-model_v2	AlphaFold	E9Q8G5	1-680	view protein structure

Promoters

RGD ID:

6888528

Promoter ID:

EPDNEW_M7715

Type:

multiple initiation site

Name:

A430033K04Rik_1

Description:

Mus musculus RIKEN cDNA A430033K04 gene , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	138,622,884 - 138,622,944	EPDNEW

RGD ID:

6836821

Promoter ID:

MM_KWN:44571

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000032590, NM_183025, UC009AFT.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	139,063,776 - 139,064,276 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:3583896	AgrOrtholog
Ensembl Genes	ENSMUSG00000056014	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000069862	ENTREZGENE
	ENSMUST00000069862.11	UniProtKB/Swiss-Prot
	ENSMUST00000198958.5	UniProtKB/TrEMBL
	ENSMUST00000200521.5	UniProtKB/TrEMBL
Gene3D-CATH	6.10.140.140	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	KRAB	UniProtKB/Swiss-Prot
	KRAB_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Krueppel-associated_box	UniProtKB/TrEMBL
	Krueppel_C2H2_ZnF	UniProtKB/TrEMBL
	Krueppel_C2H2_ZnFinger	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/Swiss-Prot
KEGG Report	mmu:243308	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:3583896	ENTREZGENE
NCBI Gene	243308	ENTREZGENE
PANTHER	IP01015P-RELATED	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	KRAB DOMAIN C2H2 ZINC FINGER	UniProtKB/TrEMBL
	KRAB DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
Pfam	KRAB	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	A430033K04Rik	PhenoGen
PROSITE	KRAB	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	KRAB	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	Krueppel-associated_box	UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
	SSF57667	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2JET9_MOUSE	UniProtKB/TrEMBL
	E9Q8G5	ENTREZGENE
	Q3V2C7_MOUSE	UniProtKB/TrEMBL
	Q3V2D1_MOUSE	UniProtKB/TrEMBL
	Q3V466_MOUSE	UniProtKB/TrEMBL
	Q7TPL8_MOUSE	UniProtKB/TrEMBL
	ZFOI1_MOUSE	UniProtKB/Swiss-Prot
UniProt Secondary	E9Q1S1	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-05	A430033K04Rik	RIKEN cDNA A430033K04 gene	C86988	expressed sequence C86988	Data merged from RGD:1608568	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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