SLC25A24 (solute carrier family 25 member 24) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: SLC25A24 (solute carrier family 25 member 24) Homo sapiens
Analyze
Symbol: SLC25A24
Name: solute carrier family 25 member 24
RGD ID: 1607032
HGNC Page HGNC:20662
Description: Enables ADP:phosphate antiporter activity; ATP:phosphate antiporter activity; and calcium ion binding activity. Involved in cellular response to calcium ion; cellular response to oxidative stress; and mitochondrial ATP transmembrane transport. Located in membrane and mitochondrion.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: APC1; ATP-Mg/P(i) co-transporter 1; calcium-binding mitochondrial carrier protein SCaMC-1; calcium-binding transporter; DKFZp586G0123; mitochondrial adenyl nucleotide antiporter SLC25A24; mitochondrial ATP-Mg/Pi carrier protein 1; mitochondrial ATP-Mg/Pi transporter; mitochondrial Ca(2+)-dependent solute carrier protein 1; SCAMC-1; SCAMC1; short calcium-binding mitochondrial carrier 1; short calcium-binding mitochondrial carrier protein 1; small calcium-binding mitochondrial carrier protein 1; solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: SLC25A24P1   SLC25A24P2  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381108,134,043 - 108,200,343 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1108,134,043 - 108,200,849 (-)EnsemblGRCh38hg38GRCh38
GRCh371108,676,665 - 108,742,965 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361108,478,968 - 108,544,497 (-)NCBINCBI36Build 36hg18NCBI36
Celera1106,852,157 - 106,917,679 (-)NCBICelera
Cytogenetic Map1p13.3NCBI
HuRef1106,622,931 - 106,688,475 (-)NCBIHuRef
CHM1_11108,792,122 - 108,857,831 (-)NCBICHM1_1
T2T-CHM13v2.01108,171,581 - 108,233,988 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 12 of 12 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SLC25A24Humanautistic disorder  IAGPRGD:143515828554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106|PMID:30208311
SLC25A24Humandementia  IAGPRGD:15015292|RGD:150152938554872ClinVar Annotator: match by term: DementiaClinVarPMID:25741868
SLC25A24Humanepilepsy with generalized tonic-clonic seizures  IAGPRGD:15015292|RGD:150152938554872ClinVar Annotator: match by term: Generalized tonic-clonic seizuresClinVarPMID:25741868
SLC25A24HumanFontaine Progeroid Syndrome  IAGPRGD:134373008554872ClinVar Annotator: match by term: Fontaine progeroid syndromeClinVarPMID:10215548|PMID:25741868|PMID:29100093|PMID:29100094|PMID:39825153
SLC25A24HumanFontaine Progeroid Syndrome  IAGPRGD:134428478554872ClinVar Annotator: match by term: Fontaine progeroid syndromeClinVarPMID:10594888|PMID:19731360|PMID:21216154|PMID:25741868|PMID:28492532|PMID:29100093|PMID:29100094|PMID:30329211
SLC25A24HumanFontaine Progeroid Syndrome  IAGPRGD:126734856|RGD:150487377|RGD:150507398|RGD:152979481|RGD:243060617|RGD:401855310|RGD:4057037078554872ClinVar Annotator: match by term: Fontaine progeroid syndrome | ClinVar Annotator: match by term: SLC25A24-related more ...ClinVarPMID:25741868
SLC25A24HumanFontaine Progeroid Syndrome  IAGPRGD:156350776|RGD:4050757348554872ClinVar Annotator: match by term: SLC25A24-related conditionClinVarPMID:28492532
SLC25A24HumanFontaine Progeroid Syndrome  IAGPRGD:4074292978554872ClinVar Annotator: match by term: Fontaine progeroid syndromeClinVarPMID:25741868|PMID:29100093
SLC25A24HumanFontaine Progeroid Syndrome  IAGPRGD:1503308878554872ClinVar Annotator: match by term: Fontaine progeroid syndromeClinVarPMID:25741868|PMID:28492532
SLC25A24Humangenetic disease  IAGPRGD:150334476|RGD:156291303|RGD:405143758|RGD:4057679398554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532
SLC25A24Humangenetic disease  IAGPRGD:155984545|RGD:155995957|RGD:156001661|RGD:156034200|RGD:156142228|RGD:156263164|RGD:156358310|RGD:329386654|RGD:401739356|RGD:401751869|RGD:401879988|RGD:401897814|RGD:405767869|RGD:405767875|RGD:405767880|RGD:405767889|RGD:405767899|RGD:405767905|RGD:405767909|RGD:405767915|RGD:405767921|RGD:405767933|RGD:405767945|RGD:407451242|RGD:407509278|RGD:407509281|RGD:597639574|RGD:597639578|RGD:597639583|RGD:597709828|RGD:597709833|RGD:5977098388554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
SLC25A24Humanhereditary spastic paraplegia 63  IAGPRGD:1564366848554872ClinVar Annotator: match by term: Hereditary spastic paraplegia 63ClinVarPMID:23911318|PMID:28492532
1 to 12 of 12 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SLC25A24HumanExperimental Liver Cirrhosis  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:25380136
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SLC25A24HumanFontaine Progeroid Syndrome  IAGP 7240710 OMIM 

1 to 20 of 99 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SLC25A24Human1,1-dichloroethene increases expressionISORGD:13237236480464vinylidene chloride results in increased expression of SLC25A24 mRNACTDPMID:26682919
SLC25A24Human1,2-dichloroethane decreases expressionISORGD:13237236480464ethylene dichloride results in decreased expression of SLC25A24 mRNACTDPMID:28960355
SLC25A24Human1,2-dimethylhydrazine decreases expressionISORGD:132372364804641,2-Dimethylhydrazine results in decreased expression of SLC25A24 mRNACTDPMID:22206623
SLC25A24Human17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of SLC25A24 mRNACTDPMID:31614463
SLC25A24Human2,3',4,4',5-Pentachlorobiphenyl decreases expressionISORGD:132372364804642,3',4,4',5-pentachlorobiphenyl results in decreased expression of SLC25A24 mRNACTDPMID:31388691
SLC25A24Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:13119826480464Tetrachlorodibenzodioxin affects the expression of SLC25A24 mRNACTDPMID:22298810|PMID:34747641
SLC25A24Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:13119826480464Tetrachlorodibenzodioxin results in decreased expression of SLC25A24 mRNACTDPMID:33387578
SLC25A24Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:13237236480464Tetrachlorodibenzodioxin results in increased expression of SLC25A24 mRNACTDPMID:28213091
SLC25A24Human2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of SLC25A24 mRNACTDPMID:20106945|PMID:21632981
SLC25A24Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:13237236480464Tetrachlorodibenzodioxin affects the expression of SLC25A24 mRNACTDPMID:21570461
SLC25A24Human3-chloropropane-1,2-diol increases expressionISORGD:13119826480464alpha-Chlorohydrin results in increased expression of SLC25A24 proteinCTDPMID:34915118
SLC25A24Human4,4'-diaminodiphenylmethane increases expressionISORGD:131198264804644,4'-diaminodiphenylmethane results in increased expression of SLC25A24 mRNACTDPMID:25380136|PMID:30723492
SLC25A24Human4,4'-sulfonyldiphenol increases expressionISORGD:13237236480464bisphenol S results in increased expression of SLC25A24 mRNACTDPMID:39298647
SLC25A24Human4,4'-sulfonyldiphenol increases expressionEXP 6480464bisphenol S results in increased expression of SLC25A24 proteinCTDPMID:34186270
SLC25A24Human4-hydroxyphenyl retinamide decreases expressionISORGD:13237236480464Fenretinide results in decreased expression of SLC25A24 mRNACTDPMID:28973697
SLC25A24Human6-propyl-2-thiouracil increases expressionISORGD:13119826480464Propylthiouracil results in increased expression of SLC25A24 mRNACTDPMID:24780913|PMID:30047161
SLC25A24Humanacetamide increases expressionISORGD:13119826480464acetamide results in increased expression of SLC25A24 mRNACTDPMID:31881176
SLC25A24Humanaflatoxin B1 increases expressionISORGD:13119826480464Aflatoxin B1 results in increased expression of SLC25A24 mRNACTDPMID:25378103
SLC25A24Humanamitrole increases expressionISORGD:13119826480464Amitrole results in increased expression of SLC25A24 mRNACTDPMID:30047161
SLC25A24Humanantirheumatic drug decreases expressionEXP 6480464Antirheumatic Agents results in decreased expression of SLC25A24 mRNACTDPMID:24449571

1 to 20 of 99 rows

Biological Process
1 to 10 of 10 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SLC25A24Humanadenine nucleotide transport involved_inIDA 150520179 PMID:15123600UniProtPMID:15123600
SLC25A24HumanADP transport involved_inIBAMGI:2144215|PANTHER:PTN000641656|SGD:S000005027|TAIR:locus:2125073|TAIR:locus:2159168|TAIR:locus:2183314150520179 GO_CentralGO_REF:0000033
SLC25A24HumanATP transport involved_inIBAMGI:2144215|PANTHER:PTN000641656|SGD:S000005027|TAIR:locus:2125073|TAIR:locus:2159168|TAIR:locus:2183314|UniProtKB:Q6NUK1|UniProtKB:Q9BV35150520179 GO_CentralGO_REF:0000033
SLC25A24Humancellular response to calcium ion involved_inIMP 150520179 PMID:22015608UniProtPMID:22015608
SLC25A24Humancellular response to oxidative stress involved_inIMP 150520179 PMID:29100093UniProtPMID:29100093
SLC25A24Humanmitochondrial ATP transmembrane transport involved_inIMP 150520179 PMID:22015608UniProtPMID:22015608
SLC25A24Humanmitochondrial ATP transmembrane transport involved_inIDA 150520179 PMID:15123600UniProtPMID:15123600
SLC25A24Humanmitochondrial transport involved_inIMP 150520179 PMID:29100093UniProtPMID:29100093
SLC25A24Humanorganic anion transport involved_inIEAGO:0008514150520179 GOCGO_REF:0000108
SLC25A24Humantransmembrane transport involved_inIEAInterPro:IPR002067150520179 InterProGO_REF:0000002
1 to 10 of 10 rows

Cellular Component
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SLC25A24Humanmembrane located_inIEAUniRule:UR000413536150520179 UniProtGO_REF:0000104
SLC25A24Humanmembrane located_inIDA 150520179 PMID:24332718UniProtPMID:24332718
SLC25A24Humanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
SLC25A24Humanmitochondrial inner membrane located_inIEAUniProtKB-SubCell:SL-0168150520179 UniProtGO_REF:0000044
SLC25A24Humanmitochondrial inner membrane located_inIEAUniProtKB-KW:KW-0999150520179 UniProtGO_REF:0000043
SLC25A24Humanmitochondrial inner membrane located_inIEAInterPro:IPR002167150520179 InterProGO_REF:0000002
SLC25A24Humanmitochondrion located_inIEAUniProtKB-KW:KW-0496150520179 UniProtGO_REF:0000043
SLC25A24Humanmitochondrion located_inIDA 150520179 PMID:15054102, PMID:15123600, PMID:22015608, PMID:29100093UniProtGO_REF:0000052|PMID:15054102|PMID:15123600|PMID:22015608|PMID:29100093
SLC25A24Humanmitochondrion located_inIEAUniProtKB:Q8BMD8|ensembl:ENSMUSP00000029477150520179 EnsemblGO_REF:0000107
SLC25A24Humanmitochondrion located_inHTP 150520179 PMID:34800366FlyBasePMID:34800366
SLC25A24Humanmitochondrion located_inIEAARBA:ARBA00026962150520179 UniProtGO_REF:0000117
1 to 11 of 11 rows

Molecular Function
1 to 12 of 12 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SLC25A24Humanadenine nucleotide transmembrane transporter activity enablesIDA 150520179 PMID:15123600UniProtPMID:15123600
SLC25A24HumanADP:phosphate antiporter activity enablesIDA 150520179 PMID:15123600UniProtPMID:15123600
SLC25A24Humanantiporter activity enablesIEAARBA:ARBA00028010150520179 UniProtGO_REF:0000117
SLC25A24Humanantiporter activity enablesIEAUniProtKB-KW:KW-0050150520179 UniProtGO_REF:0000043
SLC25A24HumanATP transmembrane transporter activity enablesIMP 150520179 PMID:22015608UniProtPMID:22015608
SLC25A24HumanATP transmembrane transporter activity enablesIBAMGI:2144215|PANTHER:PTN000641656|SGD:S000005027|TAIR:locus:2125073|TAIR:locus:2159168|TAIR:locus:2183314|UniProtKB:Q6KCM7|UniProtKB:Q6NUK1|UniProtKB:Q9BV35150520179 GO_CentralGO_REF:0000033
SLC25A24HumanATP:phosphate antiporter activity enablesIDA 150520179 PMID:15123600UniProtPMID:15123600
SLC25A24Humancalcium ion binding enablesIEAInterPro:IPR002048150520179 InterProGO_REF:0000002
SLC25A24Humancalcium ion binding enablesEXP 150520179 PMID:24332718DisProtPMID:24332718
SLC25A24Humancalcium ion binding enablesIDA 150520179 PMID:24332718UniProtPMID:24332718
SLC25A24Humanmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
SLC25A24Humanorganic anion transmembrane transporter activity enablesIEAARBA:ARBA00027999150520179 UniProtGO_REF:0000117
1 to 12 of 12 rows

1 to 20 of 126 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SLC25A24HumanAbnormal dermatoglyphics  IAGP 8699517 HPOORPHA:2963
SLC25A24HumanAbnormal eyelid morphology  IAGP 8699517 HPOORPHA:2095
SLC25A24HumanAbnormal foot morphology  IAGP 8699517 HPOORPHA:2095
SLC25A24HumanAbnormal hair morphology  IAGP 8699517 HPOORPHA:2963
SLC25A24HumanAbnormal heart morphology  IAGP 8699517 HPOMIM:612289|PMID:29100093
SLC25A24HumanAbnormal metacarpal morphology  IAGP 8699517 HPOORPHA:2095
SLC25A24HumanAbnormal nail morphology  IAGP 8699517 HPOORPHA:2963
SLC25A24HumanAbnormal skull morphology  IAGP 8699517 HPOORPHA:2095
SLC25A24HumanAbnormality of the dentition  IAGP 8699517 HPOORPHA:2095
SLC25A24HumanAbnormality of the eye  IAGP 8699517 HPOORPHA:2095
SLC25A24HumanAbnormality of vision  IAGP 8699517 HPOORPHA:2095
SLC25A24HumanAbsent distal phalanges  IAGP 8699517 HPOMIM:612289
SLC25A24HumanAbsent nipple  IAGP 8699517 HPOMIM:612289
SLC25A24HumanAnonychia  IAGP 8699517 HPOMIM:612289
SLC25A24HumanAnteriorly placed anus  IAGP 8699517 HPOMIM:612289
SLC25A24HumanAortic aneurysm  IAGP 8699517 HPOMIM:612289|PMID:29100093
SLC25A24HumanAplasia/Hypoplasia of the nasal bone  IAGP 8699517 HPOORPHA:2095
SLC25A24HumanAplastic/hypoplastic lacrimal glands  IAGP 8699517 HPOMIM:612289|PMID:29100093
SLC25A24HumanAstigmatism  IAGP 8699517 HPOORPHA:2095
SLC25A24HumanAtrial septal defect  IAGP 8699517 HPOMIM:612289
1 to 20 of 126 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SLC25A24HumanAutism  IAGPRGD:143515828554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106|PMID:30208311
SLC25A24HumanBilateral tonic-clonic seizure  IAGPRGD:150152928554872ClinVar Annotator: match by term: Bilateral tonic-clonic seizureClinVarPMID:25741868
SLC25A24HumanBilateral tonic-clonic seizure  IAGPRGD:150152938554872ClinVar Annotator: match by term: Bilateral tonic-clonic seizureClinVarPMID:25741868

#
Reference Title
Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:11230166   PMID:11827452   PMID:12477932   PMID:15054102   PMID:15123600   PMID:18029348   PMID:20379614   PMID:20877624   PMID:21873635   PMID:22015608   PMID:22268729   PMID:22939629  
PMID:23266187   PMID:24244333   PMID:24332718   PMID:25017104   PMID:25599384   PMID:26186194   PMID:26344197   PMID:26496610   PMID:26618866   PMID:26972000   PMID:27342126   PMID:27499296  
PMID:28514442   PMID:28712724   PMID:29100093   PMID:29100094   PMID:29331416   PMID:29507755   PMID:29509190   PMID:29509794   PMID:30021884   PMID:30575818   PMID:30948266   PMID:31091453  
PMID:31527615   PMID:31536960   PMID:31617661   PMID:31686588   PMID:31985874   PMID:31995728   PMID:32041737   PMID:32203420   PMID:32457219   PMID:32513696   PMID:32877691   PMID:33087821  
PMID:33567341   PMID:33961781   PMID:34079125   PMID:34349018   PMID:34561420   PMID:34709727   PMID:34800366   PMID:35241150   PMID:35253629   PMID:35439318   PMID:35509820   PMID:35545034  
PMID:35679445   PMID:35906200   PMID:36168628   PMID:36225252   PMID:36526897   PMID:36590901   PMID:36724073   PMID:36880596   PMID:37071682   PMID:37223481   PMID:37528093   PMID:37616343  
PMID:37827155   PMID:38697112   PMID:38980211  



SLC25A24
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381108,134,043 - 108,200,343 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1108,134,043 - 108,200,849 (-)EnsemblGRCh38hg38GRCh38
GRCh371108,676,665 - 108,742,965 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361108,478,968 - 108,544,497 (-)NCBINCBI36Build 36hg18NCBI36
Celera1106,852,157 - 106,917,679 (-)NCBICelera
Cytogenetic Map1p13.3NCBI
HuRef1106,622,931 - 106,688,475 (-)NCBIHuRef
CHM1_11108,792,122 - 108,857,831 (-)NCBICHM1_1
T2T-CHM13v2.01108,171,581 - 108,233,988 (-)NCBIT2T-CHM13v2.0
Slc25a24
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393109,030,465 - 109,075,725 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3109,030,465 - 109,075,773 (+)EnsemblGRCm39 Ensembl
GRCm383109,123,149 - 109,168,409 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3109,123,149 - 109,168,457 (+)EnsemblGRCm38mm10GRCm38
MGSCv373108,926,067 - 108,971,327 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363109,251,205 - 109,296,465 (+)NCBIMGSCv36mm8
Celera3111,461,243 - 111,503,231 (+)NCBICelera
Cytogenetic Map3F3NCBI
cM Map348.13NCBI
Slc25a24
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82199,449,425 - 199,487,287 (+)NCBIGRCr8
mRatBN7.22196,761,076 - 196,799,236 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2196,761,274 - 196,799,231 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2204,410,850 - 204,449,462 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02202,293,245 - 202,331,158 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02197,110,318 - 197,148,230 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02211,930,371 - 211,967,511 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2211,930,326 - 211,967,505 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02231,401,404 - 231,438,472 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42204,721,524 - 204,760,766 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12204,633,416 - 204,721,846 (+)NCBI
Celera2189,410,120 - 189,446,854 (+)NCBICelera
Cytogenetic Map2q41NCBI
Slc25a24
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543511,895,405 - 11,933,153 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543511,895,475 - 11,933,153 (-)NCBIChiLan1.0ChiLan1.0
LOC100990756
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21118,942,780 - 119,009,026 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11118,106,687 - 118,172,373 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01110,672,168 - 110,736,204 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11109,786,563 - 109,850,397 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1109,786,563 - 109,850,397 (-)Ensemblpanpan1.1panPan2
SLC25A24
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1643,424,079 - 43,476,861 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha646,210,128 - 46,258,231 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0643,702,936 - 43,751,242 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl643,629,062 - 43,751,221 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1643,437,348 - 43,485,546 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0643,407,742 - 43,455,905 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0643,837,016 - 43,885,217 (+)NCBIUU_Cfam_GSD_1.0
Slc25a24
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058117,354,096 - 117,404,929 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936731173,337 - 224,239 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936731173,366 - 224,156 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A24
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4111,579,663 - 111,634,266 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14111,580,186 - 111,632,390 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24122,094,478 - 122,127,835 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A24
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12025,403,045 - 25,460,123 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603832,789,470 - 32,846,389 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a24
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247724,278,655 - 4,324,510 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247724,280,055 - 4,324,403 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in SLC25A24
140 total Variants

Predicted Target Of
Summary Value
Count of predictions:2916
Count of miRNA genes:951
Interacting mature miRNAs:1134
Transcripts:ENST00000264128, ENST00000370041, ENST00000565488, ENST00000569674
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
407094631GWAS743607_Hneutrophil count QTL GWAS743607 (human)1e-23neutrophil quantity (VT:0000222)blood neutrophil count (CMO:0000030)1108199501108199502Human
597294268GWAS1390342_Hcardiac troponin T measurement QTL GWAS1390342 (human)0.000008cardiac troponin T measurementblood troponin T level (CMO:0001284)1108137440108137441Human
597104706GWAS1200780_Hneutrophil count QTL GWAS1200780 (human)7e-18neutrophil quantity (VT:0000222)blood neutrophil count (CMO:0000030)1108199501108199502Human
597302255GWAS1398329_Hacute graft vs. host disease, donor genotype effect measurement QTL GWAS1398329 (human)0.0000004acute graft vs. host disease, donor genotype effect measurement1108200282108200283Human
1300021BP45_HBlood pressure QTL 45 (human)1.770.00218Blood pressuresystolic1103389009129389009Human
597081805GWAS1177879_Hneutrophil count QTL GWAS1177879 (human)2e-24neutrophil quantity (VT:0000222)blood neutrophil count (CMO:0000030)1108199501108199502Human
597303830GWAS1399904_Hneutrophil count QTL GWAS1399904 (human)2e-15neutrophil quantity (VT:0000222)blood neutrophil count (CMO:0000030)1108194964108194965Human
597251511GWAS1347585_Hbacteroides seropositivity QTL GWAS1347585 (human)3e-08bacteroides seropositivity1108137718108137719Human

SHGC-75246  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371108,677,505 - 108,677,688UniSTSGRCh37
Build 361108,479,028 - 108,479,211RGDNCBI36
Celera1106,852,217 - 106,852,400RGD
Cytogenetic Map1p13.3UniSTS
HuRef1106,623,092 - 106,623,275UniSTS
GeneMap99-GB4 RH Map1334.11UniSTS
AL009685  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371108,740,978 - 108,741,122UniSTSGRCh37
Build 361108,542,501 - 108,542,645RGDNCBI36
Celera1106,915,683 - 106,915,827RGD
Cytogenetic Map1p13.3UniSTS
HuRef1106,686,477 - 106,686,621UniSTS
RH26333  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371108,677,561 - 108,677,743UniSTSGRCh37
Build 361108,479,084 - 108,479,266RGDNCBI36
Celera1106,852,273 - 106,852,455RGD
Cytogenetic Map1p13.3UniSTS
HuRef1106,623,148 - 106,623,330UniSTS
G48197  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371108,714,794 - 108,715,013UniSTSGRCh37
Build 361108,516,317 - 108,516,536RGDNCBI36
Celera1106,889,519 - 106,889,738RGD
Cytogenetic Map1p13.3UniSTS
HuRef1106,660,410 - 106,660,629UniSTS
RH103471  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371108,710,814 - 108,710,895UniSTSGRCh37
Build 361108,512,337 - 108,512,418RGDNCBI36
Celera1106,885,539 - 106,885,620RGD
Cytogenetic Map1p13.3UniSTS
HuRef1106,656,430 - 106,656,511UniSTS
GeneMap99-GB4 RH Map1334.73UniSTS
D1S3169  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371108,691,520 - 108,691,669UniSTSGRCh37
Build 361108,493,043 - 108,493,192RGDNCBI36
Celera1106,866,233 - 106,866,382RGD
Cytogenetic Map1p13.3UniSTS
HuRef1106,637,108 - 106,637,257UniSTS
SLC25A24_9617  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371108,677,425 - 108,678,337UniSTSGRCh37
Build 361108,478,948 - 108,479,860RGDNCBI36
Celera1106,852,137 - 106,853,049RGD
HuRef1106,623,012 - 106,623,924UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2249 4972 1726 2351 6 624 1932 465 2269 7291 6457 53 3733 1 852 1744 1617 175 1


1 to 27 of 27 rows
RefSeq Transcripts NG_032752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_013386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_213651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC275454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF123303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ619961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ619987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK292567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK316304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK316506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL050209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL359258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL390036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW069035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC014519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC029377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC029905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC068010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC068561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE243559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ685792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC309482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC340944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC416591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 27 of 27 rows

Ensembl Acc Id: ENST00000264128   ⟹   ENSP00000264128
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1108,134,820 - 108,200,279 (-)Ensembl
Ensembl Acc Id: ENST00000370041   ⟹   ENSP00000359058
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1108,134,823 - 108,192,818 (-)Ensembl
Ensembl Acc Id: ENST00000565488   ⟹   ENSP00000457733
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1108,134,043 - 108,200,343 (-)Ensembl
Ensembl Acc Id: ENST00000569674   ⟹   ENSP00000454393
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1108,198,493 - 108,200,849 (-)Ensembl
Ensembl Acc Id: ENST00000648874   ⟹   ENSP00000497117
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1108,134,869 - 108,200,319 (-)Ensembl
RefSeq Acc Id: NM_013386   ⟹   NP_037518
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381108,134,043 - 108,200,343 (-)NCBI
GRCh371108,677,344 - 108,742,980 (-)NCBI
Build 361108,478,968 - 108,544,497 (-)NCBI Archive
Celera1106,852,157 - 106,917,679 (-)RGD
HuRef1106,622,931 - 106,688,475 (-)NCBI
CHM1_11108,792,122 - 108,857,831 (-)NCBI
T2T-CHM13v2.01108,171,581 - 108,233,988 (-)NCBI
Sequence:
RefSeq Acc Id: NM_213651   ⟹   NP_998816
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381108,134,043 - 108,192,835 (-)NCBI
GRCh371108,677,344 - 108,742,980 (-)NCBI
Build 361108,478,968 - 108,536,886 (-)NCBI Archive
Celera1106,852,157 - 106,917,679 (-)RGD
HuRef1106,622,931 - 106,688,475 (-)NCBI
CHM1_11108,792,122 - 108,850,282 (-)NCBI
T2T-CHM13v2.01108,171,581 - 108,223,494 (-)NCBI
Sequence:
RefSeq Acc Id: NP_037518   ⟸   NM_013386
- Peptide Label: isoform 1
- UniProtKB: Q705K4 (UniProtKB/Swiss-Prot),   Q6PJJ9 (UniProtKB/Swiss-Prot),   Q5T485 (UniProtKB/Swiss-Prot),   Q5T331 (UniProtKB/Swiss-Prot),   B7ZAI9 (UniProtKB/Swiss-Prot),   Q9P129 (UniProtKB/Swiss-Prot),   Q6NUK1 (UniProtKB/Swiss-Prot),   B4E290 (UniProtKB/TrEMBL),   B7ZB41 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_998816   ⟸   NM_213651
- Peptide Label: isoform 2
- UniProtKB: B4E290 (UniProtKB/TrEMBL),   B7ZB41 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000454393   ⟸   ENST00000569674
Ensembl Acc Id: ENSP00000497117   ⟸   ENST00000648874
Ensembl Acc Id: ENSP00000359058   ⟸   ENST00000370041
EF-hand

Name Modeler Protein Id AA Range Protein Structure
AF-Q6NUK1-F1-model_v2 AlphaFold Q6NUK1 1-477 view protein structure

RGD ID:6856432
Promoter ID:EPDNEW_H1381
Type:initiation region
Name:SLC25A24_3
Description:solute carrier family 25 member 24
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1382  EPDNEW_H1383  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381108,192,799 - 108,192,859EPDNEW
RGD ID:6856434
Promoter ID:EPDNEW_H1382
Type:initiation region
Name:SLC25A24_2
Description:solute carrier family 25 member 24
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1381  EPDNEW_H1383  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381108,200,174 - 108,200,234EPDNEW
RGD ID:6856436
Promoter ID:EPDNEW_H1383
Type:initiation region
Name:SLC25A24_1
Description:solute carrier family 25 member 24
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1381  EPDNEW_H1382  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381108,200,291 - 108,200,351EPDNEW
RGD ID:6786868
Promoter ID:HG_KWN:3916
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000030280
Position:
Human AssemblyChrPosition (strand)Source
Build 361108,544,376 - 108,544,876 (-)MPROMDB


1 to 40 of 56 rows
Database
Acc Id
Source(s)
COSMIC SLC25A24 COSMIC
Ensembl Genes ENSG00000085491 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSG00000284468 UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000370041 ENTREZGENE
  ENST00000370041.4 UniProtKB/Swiss-Prot
  ENST00000565488 ENTREZGENE
  ENST00000565488.6 UniProtKB/Swiss-Prot
  ENST00000639032.1 UniProtKB/Swiss-Prot
  ENST00000640416.2 UniProtKB/Swiss-Prot
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot
  EF-hand UniProtKB/Swiss-Prot
GTEx ENSG00000085491 GTEx
  ENSG00000284468 GTEx
HGNC ID HGNC:20662 ENTREZGENE
Human Proteome Map SLC25A24 Human Proteome Map
InterPro EF-hand-dom_pair UniProtKB/Swiss-Prot
  EF_Hand_1_Ca_BS UniProtKB/Swiss-Prot
  EF_hand_dom UniProtKB/Swiss-Prot
  Graves_DC UniProtKB/Swiss-Prot
  Mit_carrier UniProtKB/Swiss-Prot
  Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot
KEGG Report hsa:29957 UniProtKB/Swiss-Prot
NCBI Gene 29957 ENTREZGENE
OMIM 608744 OMIM
PANTHER SOLUTE CARRIER FAMILY 25 UniProtKB/Swiss-Prot
Pfam EF-hand_7 UniProtKB/Swiss-Prot
  Mito_carr UniProtKB/Swiss-Prot
PharmGKB PA134978257 PharmGKB
PRINTS GRAVESDC UniProtKB/Swiss-Prot
  MITOCARRIER UniProtKB/Swiss-Prot
PROSITE EF_HAND_1 UniProtKB/Swiss-Prot
  EF_HAND_2 UniProtKB/Swiss-Prot
  SOLCAR UniProtKB/Swiss-Prot
SMART EFh UniProtKB/Swiss-Prot
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot
  SSF47473 UniProtKB/Swiss-Prot
UniProt A0A3B3IU96_HUMAN UniProtKB/TrEMBL
  B4E290 ENTREZGENE, UniProtKB/TrEMBL
  B7ZAI9 ENTREZGENE
1 to 40 of 56 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-08 SLC25A24  solute carrier family 25 member 24    solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24  Symbol and/or name change 5135510 APPROVED
2012-05-29 SLC25A24  solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24  SLC25A24  solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24  Symbol and/or name change 5135510 APPROVED