Symbol:
CLEC12A
Name:
C-type lectin domain family 12 member A
RGD ID:
1605851
HGNC Page
HGNC:31713
Description:
Enables pattern recognition receptor activity and transmembrane signaling receptor activity. Involved in negative regulation of dendritic cell differentiation; negative regulation of immune response; and negative regulation of leukocyte activation. Is active in plasma membrane.
Type:
protein-coding
RefSeq Status:
REVIEWED
Previously known as:
C-type lectin domain family 12, member A; C-type lectin protein CLL-1; C-type lectin superfamily; C-type lectin-like molecule 1; C-type lectin-like molecule-1; CD371; CLL-1; CLL1; DCAL-2; dendritic cell associated lectin 2; dendritic cell-associated lectin 2; hKLRL1; killer cell C-type lectin-like receptor L1; MGC70602; MICL; myeloid inhibitory C-type lectin-like receptor
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Mus musculus (house mouse):
Clec12a (C-type lectin domain family 12, member a) HGNC
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Rattus norvegicus (Norway rat):
Clec12a (C-type lectin domain family 12, member A) HGNC
Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Pan paniscus (bonobo/pygmy chimpanzee):
CLEC12A (C-type lectin domain family 12 member A) NCBI
Ortholog
Canis lupus familiaris (dog):
CLEC12A (C-type lectin domain family 12 member A) HGNC
EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Clec12a (C-type lectin domain family 12 member A) NCBI
Ortholog
Sus scrofa (pig):
CLEC12A (C-type lectin domain family 12 member A) HGNC
Ensembl, NCBI, OrthoDB
Chlorocebus sabaeus (green monkey):
CLEC12A (C-type lectin domain family 12 member A) NCBI
Ortholog
Other homologs 2
Mus musculus (house mouse):
Clec2m (C-type lectin domain family 2, member m) HGNC
Treefam
Alliance orthologs 3
Rattus norvegicus (Norway rat):
Clec12a (C-type lectin domain family 12, member A)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Clec12a (C-type lectin domain family 12, member a)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Allele / Splice:
See ClinVar data
Latest Assembly:
GRCh38 - Human Genome Assembly GRCh38
Position:
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 12 9,951,268 - 10,006,150 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 12 9,951,316 - 9,995,694 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 12 10,103,867 - 10,138,194 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 12 10,015,281 - 10,029,461 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 12 15,285,390 - 15,299,566 (+) NCBI Celera Cytogenetic Map 12 p13.31-p13.2 NCBI HuRef 12 9,846,830 - 9,881,061 (+) NCBI HuRef CHM1_1 12 10,072,931 - 10,107,502 (+) NCBI CHM1_1 T2T-CHM13v2.0 12 9,837,492 - 9,892,550 (+) NCBI T2T-CHM13v2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
CLEC12A Human (+)-catechin multiple interactions EXP 6480464 [Catechin co-treated with Grape Seed Proanthocyanidins] results in decreased expression of CLEC12A mRNA CTD PMID:24763279 CLEC12A Human (-)-alpha-phellandrene decreases expression EXP 6480464 alpha phellandrene results in decreased expression of CLEC12A mRNA CTD PMID:25075043 CLEC12A Human (1->4)-beta-D-glucan multiple interactions ISO RGD:1615680 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of CLEC12A mRNA CTD PMID:36331819 CLEC12A Human 17beta-estradiol multiple interactions ISO RGD:1592991 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CLEC12A mRNA CTD PMID:32741896 CLEC12A Human 17beta-estradiol 3-benzoate multiple interactions ISO RGD:1592991 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CLEC12A mRNA CTD PMID:32741896 CLEC12A Human 2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expression ISO RGD:1615680 6480464 2,2',4,4',5-brominated diphenyl ether affects the expression of CLEC12A mRNA CTD PMID:38648751 CLEC12A Human 2-palmitoylglycerol increases expression EXP 6480464 2-palmitoylglycerol results in increased expression of CLEC12A mRNA CTD PMID:37199045 CLEC12A Human 4-hydroxynon-2-enal decreases expression ISO RGD:1615680 6480464 4-hydroxy-2-nonenal results in decreased expression of CLEC12A mRNA CTD PMID:19191707 CLEC12A Human acetamide increases expression ISO RGD:1592991 6480464 acetamide results in increased expression of CLEC12A mRNA CTD PMID:31881176 CLEC12A Human aflatoxin B1 decreases methylation EXP 6480464 Aflatoxin B1 results in decreased methylation of CLEC12A gene CTD PMID:27153756 CLEC12A Human all-trans-retinoic acid increases expression EXP 6480464 Tretinoin results in increased expression of CLEC12A mRNA CTD PMID:33167477 CLEC12A Human alpha-phellandrene decreases expression EXP 6480464 alpha phellandrene results in decreased expression of CLEC12A mRNA CTD PMID:25075043 CLEC12A Human amphetamine increases expression ISO RGD:1592991 6480464 Amphetamine results in increased expression of CLEC12A mRNA CTD PMID:30779732 CLEC12A Human benzo[a]pyrene increases methylation EXP 6480464 Benzo(a)pyrene results in increased methylation of CLEC12A promoter CTD PMID:27901495 CLEC12A Human beta-naphthoflavone decreases expression EXP 6480464 beta-Naphthoflavone results in decreased expression of CLEC12A mRNA CTD PMID:32858204 CLEC12A Human bis(2-ethylhexyl) phthalate increases expression ISO RGD:1615680 6480464 Diethylhexyl Phthalate results in increased expression of CLEC12A mRNA CTD PMID:28085963 CLEC12A Human bisphenol A increases expression ISO RGD:1592991 6480464 bisphenol A results in increased expression of CLEC12A mRNA CTD PMID:25181051 CLEC12A Human bisphenol A increases methylation ISO RGD:1592991 6480464 bisphenol A results in increased methylation of CLEC12A gene CTD PMID:28505145 CLEC12A Human cisplatin increases expression EXP 6480464 Cisplatin results in increased expression of CLEC12A mRNA CTD PMID:27594783 CLEC12A Human Cuprizon increases expression ISO RGD:1592991 6480464 Cuprizone results in increased expression of CLEC12A mRNA CTD PMID:27523638 CLEC12A Human Dibutyl phosphate affects expression EXP 6480464 di-n-butylphosphoric acid affects the expression of CLEC12A mRNA CTD PMID:37042841 CLEC12A Human diquat decreases expression ISO RGD:1615680 6480464 Diquat results in decreased expression of CLEC12A mRNA CTD PMID:36851058 CLEC12A Human doxorubicin decreases expression ISO RGD:1615680 6480464 Doxorubicin results in decreased expression of CLEC12A mRNA CTD PMID:28608983 CLEC12A Human entinostat increases expression EXP 6480464 entinostat results in increased expression of CLEC12A mRNA CTD PMID:27188386 CLEC12A Human ethanol multiple interactions ISO RGD:1615680 6480464 [Carbon Tetrachloride co-treated with Ethanol] results in increased expression of CLEC12A mRNA CTD PMID:30517762 CLEC12A Human formaldehyde decreases expression EXP 6480464 Formaldehyde results in decreased expression of CLEC12A mRNA CTD PMID:27905399 CLEC12A Human furan increases expression ISO RGD:1592991 6480464 furan results in increased expression of CLEC12A mRNA CTD PMID:27387713 CLEC12A Human gentamycin increases expression ISO RGD:1592991 6480464 Gentamicins results in increased expression of CLEC12A mRNA CTD PMID:22061828 CLEC12A Human GSK-J4 decreases expression EXP 6480464 GSK-J4 results in decreased expression of CLEC12A mRNA CTD PMID:29301935 CLEC12A Human lidocaine increases expression ISO RGD:1592991 6480464 Lidocaine results in increased expression of CLEC12A mRNA CTD PMID:35283115 CLEC12A Human lipopolysaccharide increases expression ISO RGD:1615680 6480464 Lipopolysaccharides results in increased expression of CLEC12A mRNA CTD PMID:25890327 CLEC12A Human lipopolysaccharide multiple interactions EXP 6480464 [S-(1,2-dichlorovinyl)cysteine co-treated with Lipopolysaccharides] results in decreased expression of CLEC12A mRNA CTD PMID:35811015 CLEC12A Human paracetamol decreases expression EXP 6480464 Acetaminophen results in decreased expression of CLEC12A mRNA CTD PMID:26690555 CLEC12A Human perfluorooctane-1-sulfonic acid multiple interactions ISO RGD:1615680 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of CLEC12A mRNA CTD PMID:36331819 CLEC12A Human S-(1,2-dichlorovinyl)-L-cysteine decreases expression EXP 6480464 S-(1,2-dichlorovinyl)cysteine results in decreased expression of CLEC12A mRNA CTD PMID:35811015 CLEC12A Human S-(1,2-dichlorovinyl)-L-cysteine multiple interactions EXP 6480464 [S-(1,2-dichlorovinyl)cysteine co-treated with Lipopolysaccharides] results in decreased expression of CLEC12A mRNA CTD PMID:35811015 CLEC12A Human testosterone multiple interactions ISO RGD:1592991 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CLEC12A mRNA CTD PMID:32741896 CLEC12A Human tetrachloromethane multiple interactions ISO RGD:1615680 6480464 [Carbon Tetrachloride co-treated with Ethanol] results in increased expression of CLEC12A mRNA CTD PMID:30517762 CLEC12A Human titanium dioxide decreases expression ISO RGD:1615680 6480464 titanium dioxide results in decreased expression of CLEC12A mRNA CTD PMID:29264374 CLEC12A Human triphenyl phosphate affects expression EXP 6480464 triphenyl phosphate affects the expression of CLEC12A mRNA CTD PMID:37042841 CLEC12A Human tungsten decreases expression ISO RGD:1615680 6480464 Tungsten results in decreased expression of CLEC12A mRNA CTD PMID:30912803
CLEC12A Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 12 9,951,268 - 10,006,150 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 12 9,951,316 - 9,995,694 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 12 10,103,867 - 10,138,194 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 12 10,015,281 - 10,029,461 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 12 15,285,390 - 15,299,566 (+) NCBI Celera Cytogenetic Map 12 p13.31-p13.2 NCBI HuRef 12 9,846,830 - 9,881,061 (+) NCBI HuRef CHM1_1 12 10,072,931 - 10,107,502 (+) NCBI CHM1_1 T2T-CHM13v2.0 12 9,837,492 - 9,892,550 (+) NCBI T2T-CHM13v2.0
Clec12a Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 6 129,327,207 - 129,342,266 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 6 129,319,654 - 129,342,266 (+) Ensembl GRCm39 Ensembl GRCm38 6 129,349,783 - 129,365,303 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 6 129,342,691 - 129,365,303 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 6 129,300,304 - 129,315,321 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 6 129,315,979 - 129,330,996 (+) NCBI MGSCv36 mm8 Celera 6 131,072,396 - 131,087,407 (+) NCBI Celera Cytogenetic Map 6 F3 NCBI cM Map 6 63.26 NCBI
Clec12a Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 4 164,484,162 - 164,502,793 (+) NCBI GRCr8 mRatBN7.2 4 162,798,125 - 162,816,757 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 4 162,798,125 - 162,816,753 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 4 169,032,955 - 169,051,584 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 4 164,815,903 - 164,834,532 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 4 163,449,952 - 163,468,579 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 4 163,112,100 - 163,130,979 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 4 163,112,301 - 163,126,864 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 4 211,756,068 - 211,774,947 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 4 166,639,429 - 166,639,958 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 4 151,485,182 - 151,502,187 (+) NCBI Celera Cytogenetic Map 4 q42 NCBI
CLEC12A Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 10 15,441,991 - 15,498,736 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 12 15,438,749 - 15,495,495 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 12 9,999,334 - 10,056,108 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 12 10,248,163 - 10,272,070 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 12 10,248,209 - 10,272,070 (+) Ensembl panpan1.1 panPan2
CLEC12A Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 27 36,040,574 - 36,051,249 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 27 36,040,577 - 36,051,184 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 27 10,572,558 - 10,583,206 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 27 36,386,889 - 36,397,598 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 27 36,386,892 - 36,397,560 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 27 36,274,058 - 36,284,680 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 27 36,297,581 - 36,308,213 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 27 10,094,663 - 10,105,311 (+) NCBI UU_Cfam_GSD_1.0
Clec12a
CLEC12A Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 5 61,922,895 - 61,937,096 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 5 61,923,057 - 61,936,843 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 5 64,755,594 - 64,769,466 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
CLEC12A
.
Predicted Target Of
Count of predictions: 1240 Count of miRNA genes: 568 Interacting mature miRNAs: 623 Transcripts: ENST00000304361, ENST00000350667, ENST00000355690, ENST00000396507, ENST00000434319, ENST00000449959, ENST00000543839 Prediction methods: Microtar, Miranda, Rnahybrid Result types: miRGate_prediction
597437049 GWAS1533123_H C-type lectin domain family 12 member A measurement QTL GWAS1533123 (human) 9e-1973 C-type lectin domain family 12 member A measurement 12 9984073 9984074 Human 597123423 GWAS1219497_H blood protein measurement QTL GWAS1219497 (human) 2e-149 blood protein amount (VT:0005416) blood protein measurement (CMO:0000028) 12 9973650 9973651 Human 597477042 GWAS1573116_H blood protein measurement QTL GWAS1573116 (human) 1e-28 blood protein amount (VT:0005416) blood protein measurement (CMO:0000028) 12 9990298 9990299 Human 597046788 GWAS1142862_H fish consumption measurement QTL GWAS1142862 (human) 0.0000001 fish consumption measurement 12 9957242 9957243 Human 597301704 GWAS1397778_H C-type lectin domain family 12 member A measurement QTL GWAS1397778 (human) 3e-41 C-type lectin domain family 12 member A measurement 12 9957942 9957943 Human 597123428 GWAS1219502_H blood protein measurement QTL GWAS1219502 (human) 2e-114 blood protein amount (VT:0005416) blood protein measurement (CMO:0000028) 12 9994108 9994109 Human 597164559 GWAS1260633_H gut microbiome measurement QTL GWAS1260633 (human) 2e-08 gut microbiome measurement 12 9955900 9955901 Human 597174529 GWAS1270603_H C-type lectin domain family 12 member A measurement QTL GWAS1270603 (human) 3e-228 C-type lectin domain family 12 member A measurement 12 9955103 9955104 Human 597174530 GWAS1270604_H C-type lectin domain family 12 member A measurement QTL GWAS1270604 (human) 9e-5734 C-type lectin domain family 12 member A measurement 12 9985046 9985047 Human 597035628 GWAS1131702_H blood protein measurement QTL GWAS1131702 (human) 5e-70 blood protein amount (VT:0005416) blood protein measurement (CMO:0000028) 12 9994108 9994109 Human 597174531 GWAS1270605_H C-type lectin domain family 12 member A measurement QTL GWAS1270605 (human) 5e-33 C-type lectin domain family 12 member A measurement 12 9963563 9963564 Human 597174532 GWAS1270606_H C-type lectin domain family 12 member A measurement QTL GWAS1270606 (human) 3e-101 C-type lectin domain family 12 member A measurement 12 9980448 9980449 Human 597432288 GWAS1528362_H protein measurement QTL GWAS1528362 (human) 1e-906 protein measurement 12 9985046 9985047 Human 597303847 GWAS1399921_H level of C-type lectin domain family 12 member A in blood serum QTL GWAS1399921 (human) 1e-229 level of C-type lectin domain family 12 member A in blood serum 12 9984958 9984959 Human
SHGC-85259
Human Assembly Chr Position (strand) Source JBrowse GRCh37 12 10,125,305 - 10,125,601 UniSTS GRCh37 Build 36 12 10,016,572 - 10,016,868 RGD NCBI36 Celera 12 15,286,681 - 15,286,977 RGD Cytogenetic Map 12 p13.2 UniSTS HuRef 12 9,868,177 - 9,868,473 UniSTS TNG Radiation Hybrid Map 12 4575.0 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
entire extraembryonic component
1204
2315
2721
2192
4150
1680
2106
3
601
1713
442
2020
6814
6174
9
3151
786
1616
1404
166
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENST00000304361 ⟹ ENSP00000302804
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 12 9,971,409 - 9,985,595 (+) Ensembl
Ensembl Acc Id:
ENST00000350667 ⟹ ENSP00000345448
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 12 9,971,597 - 9,985,026 (+) Ensembl
Ensembl Acc Id:
ENST00000355690 ⟹ ENSP00000347916
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 12 9,951,316 - 9,985,595 (+) Ensembl
Ensembl Acc Id:
ENST00000396507 ⟹ ENSP00000379764
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 12 9,971,415 - 9,980,697 (+) Ensembl
Ensembl Acc Id:
ENST00000434319 ⟹ ENSP00000405244
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 12 9,971,435 - 9,984,241 (+) Ensembl
Ensembl Acc Id:
ENST00000449959
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 12 9,971,505 - 9,995,694 (+) Ensembl
Ensembl Acc Id:
ENST00000543839
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38.p14 Ensembl 12 9,971,597 - 9,985,026 (+) Ensembl
RefSeq Acc Id:
NM_001207010 ⟹ NP_001193939
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,951,268 - 9,985,595 (+) NCBI GRCh37 12 10,103,915 - 10,147,704 (+) NCBI HuRef 12 9,846,830 - 9,881,061 (+) ENTREZGENE CHM1_1 12 10,072,931 - 10,107,502 (+) NCBI T2T-CHM13v2.0 12 9,837,492 - 9,871,760 (+) NCBI
Sequence:
CTATTTAGCATTGCTGCTGCCAGCCCCAACCACATTTCTGATTGCCTAGGAAGAACAGCCTTTCAAATTTGACTTCTGCATGTGGATAGATTTCTTTACATATTCATCAATGTCTGAAGAAGTTACTT
hide sequence
RefSeq Acc Id:
NM_001300730 ⟹ NP_001287659
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,971,409 - 9,984,253 (+) NCBI CHM1_1 12 10,093,327 - 10,106,149 (+) NCBI T2T-CHM13v2.0 12 9,857,585 - 9,870,419 (+) NCBI
Sequence:
GGCTCATTTGCAGACATATGGGTGATTGGTACAGTAGGTTTATAAACAGAAGTTTAAACTTGTAAGCTTAAGCTTCCGTTTATAAACAGAAGTTTAAAATTATAGGTCCTGTTTAACATTCAGCTCTG
hide sequence
RefSeq Acc Id:
NM_138337 ⟹ NP_612210
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,971,409 - 9,985,595 (+) NCBI GRCh37 12 10,103,915 - 10,147,704 (+) NCBI Build 36 12 10,015,281 - 10,029,461 (+) NCBI Archive HuRef 12 9,846,830 - 9,881,061 (+) ENTREZGENE CHM1_1 12 10,093,327 - 10,107,502 (+) NCBI T2T-CHM13v2.0 12 9,857,585 - 9,871,760 (+) NCBI
Sequence:
GGCTCATTTGCAGACATATGGGTGATTGGTACAGTAGGTTTATAAACAGAAGTTTAAACTTGTA
hide sequence
RefSeq Acc Id:
NM_201623 ⟹ NP_963917
RefSeq Status:
REVIEWED
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,971,409 - 9,985,595 (+) NCBI GRCh37 12 10,103,915 - 10,147,704 (+) NCBI Build 36 12 10,015,281 - 10,029,461 (+) NCBI Archive HuRef 12 9,846,830 - 9,881,061 (+) ENTREZGENE CHM1_1 12 10,093,327 - 10,107,502 (+) NCBI T2T-CHM13v2.0 12 9,857,585 - 9,871,760 (+) NCBI
Sequence:
GGCTCATTTGCAGACATATGGGTGATTGGTACAGTAGGTTTATAAACAGAAGTTTAAACTTGTAAGCTTAAGCTTCCGTTTATAAACAGAAGTTTAAAATTATAGGTCCTGTTTAACATTCAGCTCTG
hide sequence
RefSeq Acc Id:
XM_005253324 ⟹ XP_005253381
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,971,409 - 9,985,595 (+) NCBI GRCh37 12 10,103,915 - 10,147,704 (+) NCBI
Sequence:
TTTGCAGACATATGGGTGATTGGTACAGTAGGTTTATAAACAGAAGTTTAAACTTATTTCTTTA
hide sequence
RefSeq Acc Id:
XM_006719033 ⟹ XP_006719096
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,965,345 - 9,985,595 (+) NCBI
Sequence:
AGCACATGTGTTTTTATGAGAATTATGCTGAGATAGATTTCTTTACATATTCATCAATGTCTGAAGAAGTTACTTATGCAGATCTTCAATTCCAGAACTCCAGTGAGATGGAAAAAATCCCAGAAATT
hide sequence
RefSeq Acc Id:
XM_006719035 ⟹ XP_006719098
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,965,353 - 9,995,290 (+) NCBI
Sequence:
AGCACATGTGTTTTTATGAGAATTATGCTGAGATAGATTTCTTTACATATTCATCAATGTCTGA
hide sequence
RefSeq Acc Id:
XM_006719036 ⟹ XP_006719099
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,965,354 - 9,984,253 (+) NCBI
Sequence:
AGCACATGTGTTTTTATGAGAATTATGCTGAGATAGATTTCTTTACATATTCATCAATGTCTGA
hide sequence
RefSeq Acc Id:
XM_011520570 ⟹ XP_011518872
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,965,338 - 9,985,595 (+) NCBI
Sequence:
AGGGAGAGCACATGTGTTTTTATGAGAATTATGCTGAGATAGCTAAAAGAGAAGAAATGTACTATTCCCAACAGAAGGAAAAGATTTCTTTACATATTCATCAATGTCTGAAGAAGTTACTTATGCAG
hide sequence
RefSeq Acc Id:
XM_011520571 ⟹ XP_011518873
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,965,350 - 9,985,595 (+) NCBI
Sequence:
CACATGTGTTTTTATGAGAATTATGCTGAGATAGATTTCTTTACATATTCATCAATGTCTGAAG
hide sequence
RefSeq Acc Id:
XM_011520573 ⟹ XP_011518875
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,965,354 - 9,995,290 (+) NCBI
Sequence:
AGCACATGTGTTTTTATGAGAATTATGCTGAGATAGATTTCTTTACATATTCATCAATGTCTGAAGAAGTTACTTATGCAGATCTTCAATTCCAGAACTCCAGTGAGATGGAAAAAATCCCAGAAATT
hide sequence
RefSeq Acc Id:
XM_047428397 ⟹ XP_047284353
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,951,268 - 9,985,595 (+) NCBI
RefSeq Acc Id:
XM_047428399 ⟹ XP_047284355
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,951,268 - 9,995,290 (+) NCBI
RefSeq Acc Id:
XM_047428400 ⟹ XP_047284356
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,951,268 - 9,995,290 (+) NCBI
RefSeq Acc Id:
XM_047428401 ⟹ XP_047284357
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,951,268 - 9,984,253 (+) NCBI
RefSeq Acc Id:
XM_047428402 ⟹ XP_047284358
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source GRCh38 12 9,971,409 - 10,006,150 (+) NCBI
RefSeq Acc Id:
XM_054371220 ⟹ XP_054227195
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,851,518 - 9,871,760 (+) NCBI
RefSeq Acc Id:
XM_054371221 ⟹ XP_054227196
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,851,511 - 9,871,760 (+) NCBI
RefSeq Acc Id:
XM_054371222 ⟹ XP_054227197
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,857,542 - 9,871,760 (+) NCBI
RefSeq Acc Id:
XM_054371223 ⟹ XP_054227198
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,851,523 - 9,871,760 (+) NCBI
RefSeq Acc Id:
XM_054371224 ⟹ XP_054227199
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,837,492 - 9,871,760 (+) NCBI
RefSeq Acc Id:
XM_054371225 ⟹ XP_054227200
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,851,526 - 9,881,772 (+) NCBI
RefSeq Acc Id:
XM_054371226 ⟹ XP_054227201
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,851,526 - 9,881,772 (+) NCBI
RefSeq Acc Id:
XM_054371227 ⟹ XP_054227202
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,851,527 - 9,870,419 (+) NCBI
RefSeq Acc Id:
XM_054371228 ⟹ XP_054227203
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,837,492 - 9,881,772 (+) NCBI
RefSeq Acc Id:
XM_054371229 ⟹ XP_054227204
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,837,492 - 9,881,772 (+) NCBI
RefSeq Acc Id:
XM_054371230 ⟹ XP_054227205
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,837,492 - 9,870,419 (+) NCBI
RefSeq Acc Id:
XM_054371231 ⟹ XP_054227206
Type:
CODING
Position:
Human Assembly Chr Position (strand) Source T2T-CHM13v2.0 12 9,857,585 - 9,892,550 (+) NCBI
RefSeq Acc Id:
NP_001193939 ⟸ NM_001207010
- Peptide Label:
isoform 3
- UniProtKB:
Q5QGZ9 (UniProtKB/Swiss-Prot)
- Sequence:
MWIDFFTYSSMSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIGLGVLASMFHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLC
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RefSeq Acc Id:
NP_612210 ⟸ NM_138337
- Peptide Label:
isoform 1
- UniProtKB:
Q6RH78 (UniProtKB/Swiss-Prot), Q6RH77 (UniProtKB/Swiss-Prot), Q6P4H1 (UniProtKB/Swiss-Prot), B2RA16 (UniProtKB/Swiss-Prot), Q8TDQ6 (UniProtKB/Swiss-Prot), Q5QGZ9 (UniProtKB/Swiss-Prot)
- Sequence:
MSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIGLGVLASMF
hide sequence
RefSeq Acc Id:
NP_963917 ⟸ NM_201623
- Peptide Label:
isoform 2
- UniProtKB:
Q5QGZ9 (UniProtKB/Swiss-Prot)
- Sequence:
MSEEVTYADLQFQNSSEMEKIPEIGKFGEKVHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELYSKEQEHKCKPCPRRWIWHKDSCYFLSDDVQTWQESKMAC
hide sequence
RefSeq Acc Id:
XP_005253381 ⟸ XM_005253324
- Peptide Label:
isoform X2
- UniProtKB:
Q6RH78 (UniProtKB/Swiss-Prot), Q6RH77 (UniProtKB/Swiss-Prot), Q6P4H1 (UniProtKB/Swiss-Prot), B2RA16 (UniProtKB/Swiss-Prot), Q8TDQ6 (UniProtKB/Swiss-Prot), Q5QGZ9 (UniProtKB/Swiss-Prot)
- Sequence:
MSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIGLGVLASMFHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELYSKEQEH
hide sequence
RefSeq Acc Id:
XP_006719098 ⟸ XM_006719035
- Peptide Label:
isoform X5
- Sequence:
MCFYENYAEIDFFTYSSMSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLT
hide sequence
RefSeq Acc Id:
XP_006719096 ⟸ XM_006719033
- Peptide Label:
isoform X1
- Sequence:
MCFYENYAEIDFFTYSSMSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLT
hide sequence
RefSeq Acc Id:
XP_006719099 ⟸ XM_006719036
- Peptide Label:
isoform X7
- Sequence:
MCFYENYAEIDFFTYSSMSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIGLGVLASMFHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQ
hide sequence
RefSeq Acc Id:
NP_001287659 ⟸ NM_001300730
- Peptide Label:
isoform 4
- UniProtKB:
Q5QGZ9 (UniProtKB/Swiss-Prot)
- Sequence:
MSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIGLGVLASMFHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELYSKEQEH
hide sequence
RefSeq Acc Id:
XP_011518872 ⟸ XM_011520570
- Peptide Label:
isoform X2
- UniProtKB:
Q6RH78 (UniProtKB/Swiss-Prot), Q6RH77 (UniProtKB/Swiss-Prot), Q6P4H1 (UniProtKB/Swiss-Prot), B2RA16 (UniProtKB/Swiss-Prot), Q8TDQ6 (UniProtKB/Swiss-Prot), Q5QGZ9 (UniProtKB/Swiss-Prot)
- Sequence:
MSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIGLGVLASMFHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELYSKEQEH
hide sequence
RefSeq Acc Id:
XP_011518875 ⟸ XM_011520573
- Peptide Label:
isoform X6
- Sequence:
MCFYENYAEIDFFTYSSMSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLT
hide sequence
RefSeq Acc Id:
XP_011518873 ⟸ XM_011520571
- Peptide Label:
isoform X3
- Sequence:
MCFYENYAEIDFFTYSSMSEEVTYADLQFQNSSEMEKIPEIGKFGEKVHVTLKIEMKKMNKLQN
hide sequence
Ensembl Acc Id:
ENSP00000345448 ⟸ ENST00000350667
Ensembl Acc Id:
ENSP00000347916 ⟸ ENST00000355690
Ensembl Acc Id:
ENSP00000405244 ⟸ ENST00000434319
Ensembl Acc Id:
ENSP00000379764 ⟸ ENST00000396507
Ensembl Acc Id:
ENSP00000302804 ⟸ ENST00000304361
RefSeq Acc Id:
XP_047284355 ⟸ XM_047428399
- Peptide Label:
isoform X8
RefSeq Acc Id:
XP_047284356 ⟸ XM_047428400
- Peptide Label:
isoform X9
RefSeq Acc Id:
XP_047284353 ⟸ XM_047428397
- Peptide Label:
isoform X4
RefSeq Acc Id:
XP_047284357 ⟸ XM_047428401
- Peptide Label:
isoform X10
RefSeq Acc Id:
XP_047284358 ⟸ XM_047428402
- Peptide Label:
isoform X11
RefSeq Acc Id:
XP_054227203 ⟸ XM_054371228
- Peptide Label:
isoform X8
RefSeq Acc Id:
XP_054227204 ⟸ XM_054371229
- Peptide Label:
isoform X9
RefSeq Acc Id:
XP_054227199 ⟸ XM_054371224
- Peptide Label:
isoform X4
RefSeq Acc Id:
XP_054227205 ⟸ XM_054371230
- Peptide Label:
isoform X10
RefSeq Acc Id:
XP_054227196 ⟸ XM_054371221
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_054227195 ⟸ XM_054371220
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_054227198 ⟸ XM_054371223
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_054227200 ⟸ XM_054371225
- Peptide Label:
isoform X5
RefSeq Acc Id:
XP_054227201 ⟸ XM_054371226
- Peptide Label:
isoform X6
RefSeq Acc Id:
XP_054227202 ⟸ XM_054371227
- Peptide Label:
isoform X7
RefSeq Acc Id:
XP_054227197 ⟸ XM_054371222
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_054227206 ⟸ XM_054371231
- Peptide Label:
isoform X11
RGD ID: 7223141 Promoter ID: EPDNEW_H17315 Type: initiation region Name: CLEC12A_2 Description: C-type lectin domain family 12 member A SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Alternative Promoters: null; see alsoEPDNEW_H17316 Experiment Methods: Single-end sequencing. Position: Human Assembly Chr Position (strand) Source GRCh38 12 9,951,299 - 9,951,359 EPDNEW
RGD ID: 7223139 Promoter ID: EPDNEW_H17316 Type: multiple initiation site Name: CLEC12A_1 Description: C-type lectin domain family 12 member A SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Alternative Promoters: null; see alsoEPDNEW_H17315 Experiment Methods: Single-end sequencing. Position: Human Assembly Chr Position (strand) Source GRCh38 12 9,971,414 - 9,971,474 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2015-12-22
CLEC12A
C-type lectin domain family 12 member A
C-type lectin domain family 12, member A
Symbol and/or name change
5135510 APPROVED
