Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | GFM1 | Human | combined oxidative phosphorylation deficiency 1 | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | | |
|
Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | GFM1 | Human | combined oxidative phosphorylation deficiency 1 | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | | |
|
|
|
|
|
|
|
|
|
|
# | Reference Title | Reference Citation |
1. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
2. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
4. | RGD HPO Phenotype Annotation Pipeline | RGD automated import pipeline for human HPO-to-gene-to-disease annotations |
PMID:2556394 | PMID:3169261 | PMID:11374907 | PMID:11735030 | PMID:12477932 | PMID:14702039 | PMID:15358359 | PMID:15489334 | PMID:15537906 | PMID:16632485 | PMID:17160893 | PMID:18157088 |
PMID:19135240 | PMID:19695239 | PMID:19716793 | PMID:20843780 | PMID:20877624 | PMID:21873635 | PMID:21986555 | PMID:22658674 | PMID:23798571 | PMID:25921289 | PMID:26186194 | PMID:26344197 |
PMID:26496610 | PMID:26871637 | PMID:26890991 | PMID:26972000 | PMID:27025967 | PMID:27432908 | PMID:27499296 | PMID:28169297 | PMID:28216230 | PMID:28514442 | PMID:28675297 | PMID:29568061 |
PMID:30021884 | PMID:30425250 | PMID:30884312 | PMID:30948266 | PMID:31056398 | PMID:31091453 | PMID:31470122 | PMID:31536960 | PMID:31586073 | PMID:31617661 | PMID:31680380 | PMID:31871319 |
PMID:31995728 | PMID:32176628 | PMID:32513696 | PMID:32602580 | PMID:32628020 | PMID:32737313 | PMID:32807901 | PMID:32877691 | PMID:33210482 | PMID:33845483 | PMID:33961781 | PMID:34079125 |
PMID:34373451 | PMID:34672954 | PMID:34800366 | PMID:34901782 | PMID:35007762 | PMID:35008187 | PMID:35032548 | PMID:35241646 | PMID:35256949 | PMID:35271311 | PMID:35509820 | PMID:35703069 |
PMID:35831314 | PMID:35944360 | PMID:36215168 | PMID:36225252 | PMID:36424410 | PMID:37314216 | PMID:37317656 | PMID:37827155 | PMID:38569033 | PMID:39147351 |
GFM1 (Homo sapiens - human) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gfm1 (Mus musculus - house mouse) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gfm1 (Rattus norvegicus - Norway rat) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gfm1 (Chinchilla lanigera - long-tailed chinchilla) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GFM1 (Pan paniscus - bonobo/pygmy chimpanzee) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GFM1 (Canis lupus familiaris - dog) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gfm1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GFM1 (Sus scrofa - pig) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GFM1 (Chlorocebus sabaeus - green monkey) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gfm1 (Heterocephalus glaber - naked mole-rat) |
|
.
Variants in GFM1
736 total Variants |
Name | Type | Condition(s) | Position(s) | Clinical significance |
NM_024996.7(GFM1):c.1424del (p.Arg475fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003459761]|See cases [RCV003156151]|not provided [RCV002616147] | Chr3:158665380 [GRCh38] Chr3:158383169 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.748C>T (p.Arg250Trp) | single nucleotide variant | Combined oxidative phosphorylation deficiency [RCV000851197]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000023564]|See cases [RCV003156063]|not provided [RCV000800330] | Chr3:158652154 [GRCh38] Chr3:158369943 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.521A>G (p.Asn174Ser) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000004377]|not provided [RCV000657878] | Chr3:158646896 [GRCh38] Chr3:158364685 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.139C>T (p.Arg47Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000004378]|not provided [RCV001207728] | Chr3:158645686 [GRCh38] Chr3:158363475 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1487T>G (p.Met496Arg) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000004379] | Chr3:158665443 [GRCh38] Chr3:158383232 [GRCh37] Chr3:3q25.32 |
pathogenic |
GRCh38/hg38 3q25.32-25.33(chr3:158614801-159429760)x3 | copy number gain | See cases [RCV000051537] | Chr3:158614801..159429760 [GRCh38] Chr3:158332590..159147549 [GRCh37] Chr3:159815284..160630243 [NCBI36] Chr3:3q25.32-25.33 |
uncertain significance |
GRCh38/hg38 3q24-26.32(chr3:147442566-178522531)x3 | copy number gain | See cases [RCV000051724] | Chr3:147442566..178522531 [GRCh38] Chr3:147160353..178240319 [GRCh37] Chr3:148643043..179723013 [NCBI36] Chr3:3q24-26.32 |
pathogenic |
GRCh38/hg38 3q24-29(chr3:147521892-198096565)x3 | copy number gain | See cases [RCV000051725] | Chr3:147521892..198096565 [GRCh38] Chr3:147239679..197823436 [GRCh37] Chr3:148722369..199307833 [NCBI36] Chr3:3q24-29 |
pathogenic |
GRCh38/hg38 3q25.31-29(chr3:157293378-198134727)x3 | copy number gain | See cases [RCV000051726] | Chr3:157293378..198134727 [GRCh38] Chr3:157011167..197861598 [GRCh37] Chr3:158493861..199345995 [NCBI36] Chr3:3q25.31-29 |
pathogenic |
GRCh38/hg38 3q25.32-26.31(chr3:158141556-172788324)x3 | copy number gain | See cases [RCV000051735] | Chr3:158141556..172788324 [GRCh38] Chr3:157859345..172506114 [GRCh37] Chr3:159342039..173988808 [NCBI36] Chr3:3q25.32-26.31 |
pathogenic |
GRCh38/hg38 3q22.3-29(chr3:137126982-198110178)x3 | copy number gain | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051723]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051723]|See cases [RCV000051723] | Chr3:137126982..198110178 [GRCh38] Chr3:136845824..197837049 [GRCh37] Chr3:138328514..199321446 [NCBI36] Chr3:3q22.3-29 |
pathogenic |
GRCh38/hg38 3q25.32(chr3:158652224-159036456)x1 | copy number loss | See cases [RCV000053997] | Chr3:158652224..159036456 [GRCh38] Chr3:158370013..158754245 [GRCh37] Chr3:159852707..160236939 [NCBI36] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1083+6T>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000390538]|not provided [RCV000676469]|not specified [RCV000125222] | Chr3:158654637 [GRCh38] Chr3:158372426 [GRCh37] Chr3:3q25.32 |
benign|uncertain significance |
NM_024996.7(GFM1):c.127A>G (p.Asn43Asp) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000361226]|not provided [RCV000964843]|not specified [RCV000125223] | Chr3:158645674 [GRCh38] Chr3:158363463 [GRCh37] Chr3:3q25.32 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.1601+9G>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000400146]|not provided [RCV000676470]|not specified [RCV000125224] | Chr3:158666395 [GRCh38] Chr3:158384184 [GRCh37] Chr3:3q25.32 |
benign|likely benign|uncertain significance |
NM_024996.7(GFM1):c.476A>G (p.Asn159Ser) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000999807]|not provided [RCV000224568]|not specified [RCV000125225] | Chr3:158646851 [GRCh38] Chr3:158364640 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.568A>C (p.Met190Leu) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000368039]|not provided [RCV000224632]|not specified [RCV000125226] | Chr3:158646943 [GRCh38] Chr3:158364732 [GRCh37] Chr3:3q25.32 |
benign|likely benign|uncertain significance |
NM_024996.7(GFM1):c.1990G>A (p.Val664Ile) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000999813]|not provided [RCV000676471]|not specified [RCV000125227] | Chr3:158690243 [GRCh38] Chr3:158408032 [GRCh37] Chr3:3q25.32 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_024996.7(GFM1):c.2071-17A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV002483248]|not provided [RCV002055557]|not specified [RCV000125228] | Chr3:158691122 [GRCh38] Chr3:158408911 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.-38C>T | single nucleotide variant | GFM1-related disorder [RCV003925243]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000389427]|not specified [RCV000125229] | Chr3:158644597 [GRCh38] Chr3:158362386 [GRCh37] Chr3:3q25.32 |
benign|likely benign|uncertain significance |
NM_024996.7(GFM1):c.-31A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000336135]|not provided [RCV004717014]|not specified [RCV000125230] | Chr3:158644604 [GRCh38] Chr3:158362393 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.-11C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000396594]|not provided [RCV004715711]|not specified [RCV000125231] | Chr3:158644624 [GRCh38] Chr3:158362413 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
GRCh38/hg38 3q13.11-29(chr3:103426882-198110178)x3 | copy number gain | See cases [RCV000134948] | Chr3:103426882..198110178 [GRCh38] Chr3:103145726..197837049 [GRCh37] Chr3:104628416..199321446 [NCBI36] Chr3:3q13.11-29 |
pathogenic |
GRCh38/hg38 3q25.1-29(chr3:152100512-198118383)x3 | copy number gain | See cases [RCV000139435] | Chr3:152100512..198118383 [GRCh38] Chr3:151818301..197845254 [GRCh37] Chr3:153300991..199329651 [NCBI36] Chr3:3q25.1-29 |
pathogenic |
GRCh38/hg38 3q25.31-29(chr3:156321878-198113452)x3 | copy number gain | See cases [RCV000140849] | Chr3:156321878..198113452 [GRCh38] Chr3:156039667..197840323 [GRCh37] Chr3:157522361..199324720 [NCBI36] Chr3:3q25.31-29 |
pathogenic |
GRCh38/hg38 3q25.31-29(chr3:156118441-198125115)x3 | copy number gain | See cases [RCV000142310] | Chr3:156118441..198125115 [GRCh38] Chr3:155836230..197851986 [GRCh37] Chr3:157318924..199336383 [NCBI36] Chr3:3q25.31-29 |
pathogenic |
GRCh37/hg19 3q24-29(chr3:142995020-192997215)x4 | copy number gain | See cases [RCV000240256] | Chr3:142995020..192997215 [GRCh37] Chr3:3q24-29 |
pathogenic |
NM_024996.7(GFM1):c.*226C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000262965]|not provided [RCV001613134] | Chr3:158691693 [GRCh38] Chr3:158409482 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.*483_*484insTA | insertion | Combined oxidative phosphorylation deficiency [RCV000264012] | Chr3:158691950..158691951 [GRCh38] Chr3:158409739..158409740 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.3G>A (p.Met1Ile) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001273487]|not provided [RCV000196656] | Chr3:158644637 [GRCh38] Chr3:158362426 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.273del (p.Met92fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV002500612]|not provided [RCV000200452] | Chr3:158646202 [GRCh38] Chr3:158363991 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1583C>T (p.Thr528Ile) | single nucleotide variant | not provided [RCV000200666] | Chr3:158666368 [GRCh38] Chr3:158384157 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1596del (p.Val533fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468887]|not provided [RCV000196892] | Chr3:158666381 [GRCh38] Chr3:158384170 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1457C>T (p.Thr486Ile) | single nucleotide variant | Inborn genetic diseases [RCV002517219]|not provided [RCV000488200] | Chr3:158665413 [GRCh38] Chr3:158383202 [GRCh37] Chr3:3q25.32 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.2011C>T (p.Arg671Cys) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000763507]|not provided [RCV000197077] | Chr3:158690264 [GRCh38] Chr3:158408053 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1209C>T (p.Ala403=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001147220]|not provided [RCV000946773]|not specified [RCV000197193] | Chr3:158659047 [GRCh38] Chr3:158376836 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1593C>T (p.Ala531=) | single nucleotide variant | GFM1-related disorder [RCV003927840]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001148120]|not provided [RCV000883125]|not specified [RCV000197206] | Chr3:158666378 [GRCh38] Chr3:158384167 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.690-5C>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001001208]|not provided [RCV000415998]|not specified [RCV000197431] | Chr3:158652091 [GRCh38] Chr3:158369880 [GRCh37] Chr3:3q25.32 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.1114C>T (p.Arg372Cys) | single nucleotide variant | Inborn genetic diseases [RCV002517220]|not provided [RCV000197604] | Chr3:158658952 [GRCh38] Chr3:158376741 [GRCh37] Chr3:3q25.32 |
likely pathogenic|uncertain significance |
NM_024996.7(GFM1):c.238A>G (p.Lys80Glu) | single nucleotide variant | not provided [RCV000197651] | Chr3:158646168 [GRCh38] Chr3:158363957 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.235-14G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000307563]|not provided [RCV002054327]|not specified [RCV000198372] | Chr3:158646151 [GRCh38] Chr3:158363940 [GRCh37] Chr3:3q25.32 |
benign|uncertain significance |
NM_024996.7(GFM1):c.622G>A (p.Glu208Lys) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000764473]|not provided [RCV000198516] | Chr3:158649090 [GRCh38] Chr3:158366879 [GRCh37] Chr3:3q25.32 |
likely pathogenic|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.700C>T (p.Arg234Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000995549]|not provided [RCV000198570] | Chr3:158652106 [GRCh38] Chr3:158369895 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.2232del (p.Gly747fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001833146]|not provided [RCV000198766] | Chr3:158691442 [GRCh38] Chr3:158409231 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic|uncertain significance |
NM_024996.7(GFM1):c.368-18A>G | single nucleotide variant | not provided [RCV002054328]|not specified [RCV000199107] | Chr3:158646725 [GRCh38] Chr3:158364514 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.77A>G (p.Lys26Arg) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000398210]|not provided [RCV000915754]|not specified [RCV000195533] | Chr3:158644711 [GRCh38] Chr3:158362500 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.731C>T (p.Ala244Val) | single nucleotide variant | not provided [RCV002122403] | Chr3:158652137 [GRCh38] Chr3:158369926 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.960A>C (p.Pro320=) | single nucleotide variant | GFM1-related disorder [RCV004748652]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000316489]|not provided [RCV000910628]|not specified [RCV000195750] | Chr3:158653429 [GRCh38] Chr3:158371218 [GRCh37] Chr3:3q25.32 |
benign|likely benign|uncertain significance |
NM_024996.7(GFM1):c.1369C>T (p.Pro457Ser) | single nucleotide variant | not provided [RCV000195753]|not specified [RCV004700590] | Chr3:158662673 [GRCh38] Chr3:158380462 [GRCh37] Chr3:3q25.32 |
likely pathogenic|uncertain significance |
NM_024996.7(GFM1):c.2165C>T (p.Pro722Leu) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001835722]|not provided [RCV000199524] | Chr3:158691376 [GRCh38] Chr3:158409165 [GRCh37] Chr3:3q25.32 |
likely pathogenic|uncertain significance |
NM_024996.7(GFM1):c.16G>C (p.Ala6Pro) | single nucleotide variant | not provided [RCV000196171] | Chr3:158644650 [GRCh38] Chr3:158362439 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.688G>A (p.Gly230Ser) | single nucleotide variant | GFM1-related disorder [RCV003417713]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003330568]|not provided [RCV000199744] | Chr3:158649156 [GRCh38] Chr3:158366945 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1181G>A (p.Arg394Gln) | single nucleotide variant | not provided [RCV000200029] | Chr3:158659019 [GRCh38] Chr3:158376808 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1429G>T (p.Asp477Tyr) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001825499]|not provided [RCV000757328] | Chr3:158665385 [GRCh38] Chr3:158383174 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1377C>T (p.Asn459=) | single nucleotide variant | not provided [RCV000943989]|not specified [RCV000605197] | Chr3:158662681 [GRCh38] Chr3:158380470 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.395A>C (p.Glu132Ala) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000625929] | Chr3:158646770 [GRCh38] Chr3:158364559 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.897C>T (p.Ser299=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000280136]|not provided [RCV001453939] | Chr3:158653366 [GRCh38] Chr3:158371155 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.1032C>T (p.Asn344=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000281525]|not provided [RCV000952513]|not specified [RCV000429176] | Chr3:158654580 [GRCh38] Chr3:158372369 [GRCh37] Chr3:3q25.32 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.18T>C (p.Ala6=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000282348]|not provided [RCV000676466]|not specified [RCV001795958] | Chr3:158644652 [GRCh38] Chr3:158362441 [GRCh37] Chr3:3q25.32 |
benign |
GRCh37/hg19 3q25.32(chr3:158361184-158410354)x3 | copy number gain | See cases [RCV000240197] | Chr3:158361184..158410354 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.2190C>T (p.Asp730=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000275898]|not provided [RCV000913641] | Chr3:158691401 [GRCh38] Chr3:158409190 [GRCh37] Chr3:3q25.32 |
benign|likely benign|uncertain significance |
NM_024996.7(GFM1):c.643G>A (p.Val215Ile) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000987347]|not provided [RCV000676468]|not specified [RCV001795959] | Chr3:158649111 [GRCh38] Chr3:158649111..158649112 [GRCh38] Chr3:158366900 [GRCh37] Chr3:158366900..158366901 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.987C>A (p.Leu329=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000376033]|not provided [RCV000933080] | Chr3:158653456 [GRCh38] Chr3:158371245 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.234+12C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000398325]|not provided [RCV002057851] | Chr3:158645793 [GRCh38] Chr3:158363582 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.*454_*456del | deletion | Combined oxidative phosphorylation deficiency [RCV000377206] | Chr3:158691919..158691921 [GRCh38] Chr3:158409708..158409710 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.*6C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000317038]|not provided [RCV000676472]|not specified [RCV001795960] | Chr3:158691473 [GRCh38] Chr3:158409262 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.*578C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000378782] | Chr3:158692045 [GRCh38] Chr3:158409834 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.56C>T (p.Ala19Val) | single nucleotide variant | GFM1-related disorder [RCV003950210]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000337390]|not provided [RCV000943185] | Chr3:158644690 [GRCh38] Chr3:158362479 [GRCh37] Chr3:3q25.32 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.1324-15T>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000286924]|not provided [RCV002057852]|not specified [RCV000424127] | Chr3:158662613 [GRCh38] Chr3:158380402 [GRCh37] Chr3:3q25.32 |
benign|likely benign|uncertain significance |
NM_024996.7(GFM1):c.*691T>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000288969]|not provided [RCV004716038] | Chr3:158692158 [GRCh38] Chr3:158409947 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.*766G>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000290294] | Chr3:158692233 [GRCh38] Chr3:158410022 [GRCh37] Chr3:3q25.32 |
benign|uncertain significance |
NM_024996.7(GFM1):c.1083+3A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000341073]|Inborn genetic diseases [RCV002523249]|not provided [RCV001636960] | Chr3:158654634 [GRCh38] Chr3:158372423 [GRCh37] Chr3:3q25.32 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.*731C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000384430] | Chr3:158692198 [GRCh38] Chr3:158409987 [GRCh37] Chr3:3q25.32 |
benign|uncertain significance |
NM_024996.7(GFM1):c.1343A>G (p.Asp448Gly) | single nucleotide variant | GFM1-related disorder [RCV003957777]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000341858]|not provided [RCV000911472] | Chr3:158662647 [GRCh38] Chr3:158380436 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.373G>A (p.Val125Met) | single nucleotide variant | GFM1-related disorder [RCV004748738]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000362292]|not provided [RCV000942298] | Chr3:158646748 [GRCh38] Chr3:158364537 [GRCh37] Chr3:3q25.32 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.*713C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000343936] | Chr3:158692180 [GRCh38] Chr3:158409969 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.1406G>A (p.Gly469Asp) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000366352]|not provided [RCV002520101] | Chr3:158665362 [GRCh38] Chr3:158383151 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.702A>G (p.Arg234=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000388686] | Chr3:158652108 [GRCh38] Chr3:158369897 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.-33C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000295077]|not provided [RCV001672626] | Chr3:158644602 [GRCh38] Chr3:158362391 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.*950C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000349969] | Chr3:158692417 [GRCh38] Chr3:158410206 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.*1004T>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000394550] | Chr3:158692471 [GRCh38] Chr3:158410260 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1831C>T (p.Leu611=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000312996]|not provided [RCV001521349] | Chr3:158684590 [GRCh38] Chr3:158402379 [GRCh37] Chr3:3q25.32 |
benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.-73C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000331237]|not provided [RCV004710937] | Chr3:158644562 [GRCh38] Chr3:158362351 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1384G>T (p.Asp462Tyr) | single nucleotide variant | Combined oxidative phosphorylation deficiency [RCV000395721]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001526738] | Chr3:158665340 [GRCh38] Chr3:158383129 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.424del (p.Val142fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000272222]|not provided [RCV000814936] | Chr3:158646799 [GRCh38] Chr3:158364588 [GRCh37] Chr3:3q25.32 |
pathogenic|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.776A>G (p.Asn259Ser) | single nucleotide variant | not provided [RCV000489339] | Chr3:158652182 [GRCh38] Chr3:158369971 [GRCh37] Chr3:3q25.32 |
likely pathogenic|conflicting interpretations of pathogenicity |
NM_024996.7(GFM1):c.1323+72A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001543946]|not provided [RCV001619959] | Chr3:158661047 [GRCh38] Chr3:158378836 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.*245A>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000317976] | Chr3:158691712 [GRCh38] Chr3:158409501 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1385A>G (p.Asp462Gly) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000306955] | Chr3:158665341 [GRCh38] Chr3:158383130 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.*119G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000353040] | Chr3:158691586 [GRCh38] Chr3:158409375 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.*559T>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000323880] | Chr3:158692026 [GRCh38] Chr3:158409815 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.81+5C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000301848] | Chr3:158644720 [GRCh38] Chr3:158362509 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.829dup (p.Ser277fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000779394]|not provided [RCV000416186] | Chr3:158652232..158652233 [GRCh38] Chr3:158370021..158370022 [GRCh37] Chr3:3q25.32 |
likely pathogenic|conflicting interpretations of pathogenicity|uncertain significance |
GRCh37/hg19 3q25.32(chr3:158060351-158665225)x3 | copy number gain | See cases [RCV000449404] | Chr3:158060351..158665225 [GRCh37] Chr3:3q25.32 |
uncertain significance |
GRCh37/hg19 3q25.32-26.33(chr3:157128738-181637333)x3 | copy number gain | See cases [RCV000446611] | Chr3:157128738..181637333 [GRCh37] Chr3:3q25.32-26.33 |
pathogenic |
GRCh37/hg19 3q25.32(chr3:158405216-158776705)x1 | copy number loss | See cases [RCV000446683] | Chr3:158405216..158776705 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1764+11A>T | single nucleotide variant | GFM1-related disorder [RCV003922707]|not provided [RCV002061398]|not specified [RCV000434519] | Chr3:158682168 [GRCh38] Chr3:158399957 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.1909+13C>T | single nucleotide variant | not provided [RCV002061399]|not specified [RCV000445199] | Chr3:158684681 [GRCh38] Chr3:158402470 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.1494A>G (p.Glu498=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001148119]|not provided [RCV000897890] | Chr3:158665450 [GRCh38] Chr3:158383239 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.597G>A (p.Ala199=) | single nucleotide variant | not provided [RCV001439230]|not specified [RCV000434679] | Chr3:158649065 [GRCh38] Chr3:158366854 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1909+13C>G | single nucleotide variant | not provided [RCV002064932]|not specified [RCV000418274] | Chr3:158684681 [GRCh38] Chr3:158402470 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.2059C>T (p.Leu687=) | single nucleotide variant | GFM1-related disorder [RCV003970232]|not provided [RCV000881004] | Chr3:158690312 [GRCh38] Chr3:158408101 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.234+17G>A | single nucleotide variant | not provided [RCV002525444]|not specified [RCV000439110] | Chr3:158645798 [GRCh38] Chr3:158363587 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1626A>G (p.Gln542=) | single nucleotide variant | not provided [RCV002522390]|not specified [RCV000443950] | Chr3:158682019 [GRCh38] Chr3:158399808 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.744C>T (p.Asp248=) | single nucleotide variant | not provided [RCV001412253] | Chr3:158652150 [GRCh38] Chr3:158369939 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.-25C>T | single nucleotide variant | not specified [RCV000441164] | Chr3:158644610 [GRCh38] Chr3:158362399 [GRCh37] Chr3:3q25.32 |
likely benign |
GRCh37/hg19 3q24-26.2(chr3:147180945-168415875)x1 | copy number loss | See cases [RCV000448130] | Chr3:147180945..168415875 [GRCh37] Chr3:3q24-26.2 |
pathogenic |
GRCh37/hg19 3q25.2-29(chr3:152356847-197851986)x3 | copy number gain | See cases [RCV000448608] | Chr3:152356847..197851986 [GRCh37] Chr3:3q25.2-29 |
pathogenic |
NM_024996.7(GFM1):c.166_169dup (p.Ser57Ter) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003470574]|not provided [RCV000483794] | Chr3:158645709..158645710 [GRCh38] Chr3:158363498..158363499 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.2125-11dup | duplication | not provided [RCV003736791]|not specified [RCV000487169] | Chr3:158691317..158691318 [GRCh38] Chr3:158409106..158409107 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.2125-11del | deletion | not specified [RCV000600494] | Chr3:158691318 [GRCh38] Chr3:158409107 [GRCh37] Chr3:3q25.32 |
likely benign |
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) | copy number gain | See cases [RCV000512358] | Chr3:61892..197851986 [GRCh37] Chr3:3p26.3-q29 |
pathogenic |
NM_024996.7(GFM1):c.2071-20T>C | single nucleotide variant | not provided [RCV002065262]|not specified [RCV000609575] | Chr3:158691119 [GRCh38] Chr3:158408908 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.689+908G>A | single nucleotide variant | Combined oxidative phosphorylation deficiency [RCV000851196]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003465353]|not provided [RCV001377165] | Chr3:158650065 [GRCh38] Chr3:158367854 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic|likely benign |
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 | copy number gain | See cases [RCV000511055] | Chr3:61892..197851986 [GRCh37] Chr3:3p26.3-q29 |
pathogenic |
NM_024996.7(GFM1):c.1396T>C (p.Phe466Leu) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003486088] | Chr3:158665352 [GRCh38] Chr3:158383141 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.455A>C (p.Gln152Pro) | single nucleotide variant | not provided [RCV000658473] | Chr3:158646830 [GRCh38] Chr3:158364619 [GRCh37] Chr3:3q25.32 |
likely pathogenic|conflicting interpretations of pathogenicity |
GRCh37/hg19 3q25.32-25.33(chr3:157991657-159073531)x3 | copy number gain | not provided [RCV000682320] | Chr3:157991657..159073531 [GRCh37] Chr3:3q25.32-25.33 |
uncertain significance |
NM_024996.7(GFM1):c.193C>A (p.Arg65=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001148014]|not provided [RCV000676467] | Chr3:158645740 [GRCh38] Chr3:158363529 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.1083+82T>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001543945]|not provided [RCV001713121] | Chr3:158654713 [GRCh38] Chr3:158372502 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1546T>C (p.Cys516Arg) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001002682] | Chr3:158666331 [GRCh38] Chr3:158384120 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1571C>T (p.Ala524Val) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001002684] | Chr3:158666356 [GRCh38] Chr3:158384145 [GRCh37] Chr3:3q25.32 |
pathogenic |
GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 | copy number gain | not provided [RCV000742133] | Chr3:60174..197948027 [GRCh37] Chr3:3p26.3-q29 |
pathogenic |
GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 | copy number gain | not provided [RCV000742138] | Chr3:61495..197838262 [GRCh37] Chr3:3p26.3-q29 |
pathogenic |
GRCh37/hg19 3q25.32(chr3:157957741-158531803)x3 | copy number gain | not provided [RCV000742903] | Chr3:157957741..158531803 [GRCh37] Chr3:3q25.32 |
benign |
GRCh37/hg19 3q25.32(chr3:158342928-158411681)x1 | copy number loss | not provided [RCV000742908] | Chr3:158342928..158411681 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1305C>G (p.Ala435=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001147221]|not provided [RCV000941272] | Chr3:158660957 [GRCh38] Chr3:158378746 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.81+84C>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001543941]|not provided [RCV001713120] | Chr3:158644799 [GRCh38] Chr3:158362588 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.689+891C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001543942]|not provided [RCV001694070] | Chr3:158650048 [GRCh38] Chr3:158367837 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.690-87A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001543943]|not provided [RCV001647392] | Chr3:158652009 [GRCh38] Chr3:158369798 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1083+57C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001543944]|not provided [RCV001638146] | Chr3:158654688 [GRCh38] Chr3:158372477 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1519-25A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001543948]|not provided [RCV001655852] | Chr3:158666279 [GRCh38] Chr3:158384068 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.*9A>G | single nucleotide variant | GFM1-related disorder [RCV003931165]|not provided [RCV001534982] | Chr3:158691476 [GRCh38] Chr3:158409265 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-199G>A | single nucleotide variant | not provided [RCV001709274] | Chr3:158646544 [GRCh38] Chr3:158364333 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.100C>T (p.Arg34Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001002683]|not provided [RCV002549188] | Chr3:158645647 [GRCh38] Chr3:158363436 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1149_1160del (p.Ile384_Thr387del) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001002681] | Chr3:158658983..158658994 [GRCh38] Chr3:158376772..158376783 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1519-211T>G | single nucleotide variant | not provided [RCV001550465] | Chr3:158666093 [GRCh38] Chr3:158383882 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1822C>T (p.Arg608Trp) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000987349]|not provided [RCV002550600] | Chr3:158684581 [GRCh38] Chr3:158402370 [GRCh37] Chr3:3q25.32 |
likely pathogenic|uncertain significance |
NM_024996.7(GFM1):c.1910-8del | deletion | not provided [RCV001577167] | Chr3:158690142 [GRCh38] Chr3:158407931 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1601+90T>G | single nucleotide variant | not provided [RCV001565625] | Chr3:158666476 [GRCh38] Chr3:158384265 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.81+283dup | duplication | not provided [RCV001551459] | Chr3:158644980..158644981 [GRCh38] Chr3:158362769..158362770 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1083+8G>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001272461]|not provided [RCV000944842] | Chr3:158654639 [GRCh38] Chr3:158372428 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.2016T>C (p.His672=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001825858]|not provided [RCV000921294] | Chr3:158690269 [GRCh38] Chr3:158408058 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.220G>T (p.Ala74Ser) | single nucleotide variant | GFM1-related disorder [RCV003923302]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001272458]|not provided [RCV000923394] | Chr3:158645767 [GRCh38] Chr3:158363556 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.1116C>T (p.Arg372=) | single nucleotide variant | not provided [RCV000983205] | Chr3:158658954 [GRCh38] Chr3:158376743 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.294A>G (p.Arg98=) | single nucleotide variant | not provided [RCV000981069] | Chr3:158646224 [GRCh38] Chr3:158364013 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1368G>A (p.Lys456=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001272464]|not provided [RCV000904804] | Chr3:158662672 [GRCh38] Chr3:158380461 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1110T>C (p.Tyr370=) | single nucleotide variant | not provided [RCV000928367] | Chr3:158658948 [GRCh38] Chr3:158376737 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.843A>G (p.Leu281=) | single nucleotide variant | not provided [RCV000983730] | Chr3:158653312 [GRCh38] Chr3:158371101 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_020169.4(LXN):c.406G>A (p.Val136Ile) | single nucleotide variant | not provided [RCV000883126] | Chr3:158669097 [GRCh38] Chr3:158386886 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.661C>T (p.Arg221Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003462600]|not provided [RCV001067025] | Chr3:158649129 [GRCh38] Chr3:158366918 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1255_1277dup (p.Ser427fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003462551]|not provided [RCV001052419] | Chr3:158660906..158660907 [GRCh38] Chr3:158378695..158378696 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.2008C>T (p.Arg670Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003387961]|not provided [RCV001067859] | Chr3:158690261 [GRCh38] Chr3:158408050 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1348G>A (p.Val450Ile) | single nucleotide variant | not provided [RCV003312593] | Chr3:158662652 [GRCh38] Chr3:158380441 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.521dup (p.Asn174fs) | duplication | not provided [RCV000819934] | Chr3:158646894..158646895 [GRCh38] Chr3:158364683..158364684 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1518+1G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000779395] | Chr3:158665475 [GRCh38] Chr3:158383264 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1910-1G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000779396] | Chr3:158690162 [GRCh38] Chr3:158407951 [GRCh37] Chr3:3q25.32 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_020169.4(LXN):c.143G>A (p.Arg48Lys) | single nucleotide variant | not provided [RCV000951070] | Chr3:158671006 [GRCh38] Chr3:158388795 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.837A>G (p.Leu279=) | single nucleotide variant | not provided [RCV000930538] | Chr3:158652243 [GRCh38] Chr3:158370032 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1242C>T (p.Ala414=) | single nucleotide variant | not provided [RCV000928089] | Chr3:158660894 [GRCh38] Chr3:158378683 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1683A>G (p.Pro561=) | single nucleotide variant | not provided [RCV000901572] | Chr3:158682076 [GRCh38] Chr3:158399865 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1656A>G (p.Val552=) | single nucleotide variant | not provided [RCV000980888] | Chr3:158682049 [GRCh38] Chr3:158399838 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.667A>G (p.Ile223Val) | single nucleotide variant | GFM1-related disorder [RCV003960371]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001272459]|not provided [RCV000918367] | Chr3:158649135 [GRCh38] Chr3:158366924 [GRCh37] Chr3:3q25.32 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.1704A>G (p.Glu568=) | single nucleotide variant | not provided [RCV000930149] | Chr3:158682097 [GRCh38] Chr3:158399886 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.51C>T (p.Ala17=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001272457]|not provided [RCV000932460] | Chr3:158644685 [GRCh38] Chr3:158362474 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.807G>A (p.Leu269=) | single nucleotide variant | not provided [RCV000941271] | Chr3:158652213 [GRCh38] Chr3:158370002 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1323+83A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001543947]|not provided [RCV000830746] | Chr3:158661058 [GRCh38] Chr3:158378847 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.539del (p.Gly180fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003232990]|not provided [RCV000798894] | Chr3:158646912 [GRCh38] Chr3:158364701 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1519-211T>C | single nucleotide variant | not provided [RCV000828850] | Chr3:158666093 [GRCh38] Chr3:158383882 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1601+38A>G | single nucleotide variant | not provided [RCV000838508] | Chr3:158666424 [GRCh38] Chr3:158384213 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1781G>A (p.Cys594Tyr) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000987348] | Chr3:158684540 [GRCh38] Chr3:158402329 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.54del (p.Ala19fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV000826110]|not provided [RCV002538243] | Chr3:158644684 [GRCh38] Chr3:158362473 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.367+223C>T | single nucleotide variant | not provided [RCV000844192] | Chr3:158646520 [GRCh38] Chr3:158364309 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.401_404dup (p.Arg136fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004569574]|not provided [RCV000801094] | Chr3:158646775..158646776 [GRCh38] Chr3:158364564..158364565 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.720del (p.Glu241fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001273488]|not provided [RCV000809691] | Chr3:158652126 [GRCh38] Chr3:158369915 [GRCh37] Chr3:3q25.32 |
pathogenic |
GRCh37/hg19 3q25.32(chr3:158405216-158776705)x1 | copy number loss | not provided [RCV000849133] | Chr3:158405216..158776705 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.193C>T (p.Arg65Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003467367]|not provided [RCV000798054] | Chr3:158645740 [GRCh38] Chr3:158363529 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.840+108C>G | single nucleotide variant | not provided [RCV000833404] | Chr3:158652354 [GRCh38] Chr3:158370143 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1118G>A (p.Ser373Asn) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001147219] | Chr3:158658956 [GRCh38] Chr3:158376745 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.*803T>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001147304] | Chr3:158692270 [GRCh38] Chr3:158410059 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.689+611A>G | single nucleotide variant | not provided [RCV000828564] | Chr3:158649768 [GRCh38] Chr3:158367557 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.998+150G>A | single nucleotide variant | not provided [RCV000828848] | Chr3:158653617 [GRCh38] Chr3:158371406 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1948A>G (p.Met650Val) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001148122]|Inborn genetic diseases [RCV002557175]|not provided [RCV002559421] | Chr3:158690201 [GRCh38] Chr3:158407990 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.5(GFM1):c.-386G>T | single nucleotide variant | not provided [RCV000828840] | Chr3:158644249 [GRCh38] Chr3:158362038 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1852A>G (p.Met618Val) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001148121] | Chr3:158684611 [GRCh38] Chr3:158402400 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.291_292del (p.Gly99fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461170]|not provided [RCV000807566] | Chr3:158646220..158646221 [GRCh38] Chr3:158364009..158364010 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1722C>T (p.Phe574=) | single nucleotide variant | not provided [RCV000976800] | Chr3:158682115 [GRCh38] Chr3:158399904 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.192A>G (p.Glu64=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001832207]|not provided [RCV000960840] | Chr3:158645739 [GRCh38] Chr3:158363528 [GRCh37] Chr3:3q25.32 |
likely benign |
NC_000003.12:g.(?_158681985)_(158691477_?)del | deletion | not provided [RCV000809294] | Chr3:158681985..158691477 [GRCh38] Chr3:158399774..158409266 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.-85C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001147126] | Chr3:158644550 [GRCh38] Chr3:158362339 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.*1033A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001147305] | Chr3:158692500 [GRCh38] Chr3:158410289 [GRCh37] Chr3:3q25.32 |
uncertain significance |
GRCh37/hg19 3q25.32(chr3:157542717-158388665)x3 | copy number gain | not provided [RCV000847182] | Chr3:157542717..158388665 [GRCh37] Chr3:3q25.32 |
uncertain significance |
GRCh37/hg19 3q25.32(chr3:158149940-158802473)x3 | copy number gain | not provided [RCV000848889] | Chr3:158149940..158802473 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.607A>G (p.Ile203Val) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001195913] | Chr3:158649075 [GRCh38] Chr3:158366864 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.*635A>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001145363] | Chr3:158692102 [GRCh38] Chr3:158409891 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.997_998+2del | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001833837]|not provided [RCV001209160] | Chr3:158653466..158653469 [GRCh38] Chr3:158371255..158371258 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1765-2_1765-1del | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001833935]|not provided [RCV001223407] | Chr3:158684522..158684523 [GRCh38] Chr3:158402311..158402312 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1180C>T (p.Arg394Trp) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001836211]|not provided [RCV001241465] | Chr3:158659018 [GRCh38] Chr3:158376807 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1601+1G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003462703]|not provided [RCV001210116] | Chr3:158666387 [GRCh38] Chr3:158384176 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.-66C>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001147127] | Chr3:158644569 [GRCh38] Chr3:158362358 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.881C>T (p.Pro294Leu) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001199013] | Chr3:158653350 [GRCh38] Chr3:158371139 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1519-33A>T | single nucleotide variant | not provided [RCV001550808] | Chr3:158666271 [GRCh38] Chr3:158384060 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1221+203G>A | single nucleotide variant | not provided [RCV001555345] | Chr3:158659262 [GRCh38] Chr3:158377051 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.690-40G>A | single nucleotide variant | not provided [RCV001583869] | Chr3:158652056 [GRCh38] Chr3:158369845 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.235-85G>C | single nucleotide variant | not provided [RCV001572216] | Chr3:158646080 [GRCh38] Chr3:158363869 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-177G>A | single nucleotide variant | not provided [RCV001562453] | Chr3:158646566 [GRCh38] Chr3:158364355 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.689+1211A>C | single nucleotide variant | not provided [RCV001696570] | Chr3:158650368 [GRCh38] Chr3:158368157 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.689+1184A>G | single nucleotide variant | not provided [RCV001581607] | Chr3:158650341 [GRCh38] Chr3:158368130 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1909+41A>G | single nucleotide variant | not provided [RCV001587721] | Chr3:158684709 [GRCh38] Chr3:158402498 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1065C>T (p.Gly355=) | single nucleotide variant | not provided [RCV001570541] | Chr3:158654613 [GRCh38] Chr3:158372402 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1909+232A>C | single nucleotide variant | not provided [RCV001565897] | Chr3:158684900 [GRCh38] Chr3:158402689 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1256C>T (p.Ala419Val) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001832761]|Inborn genetic diseases [RCV002568379]|not provided [RCV001558686] | Chr3:158660908 [GRCh38] Chr3:158378697 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1380+221T>A | single nucleotide variant | not provided [RCV001647859] | Chr3:158662905 [GRCh38] Chr3:158380694 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.498C>T (p.Asn166=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001836054]|not provided [RCV000983429] | Chr3:158646873 [GRCh38] Chr3:158364662 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.788A>G (p.Gln263Arg) | single nucleotide variant | GFM1-related disorder [RCV003968054]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001272460]|not provided [RCV000886511] | Chr3:158652194 [GRCh38] Chr3:158369983 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_020169.4(LXN):c.38C>T (p.Ala13Val) | single nucleotide variant | not provided [RCV000886512] | Chr3:158672441 [GRCh38] Chr3:158390230 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.81+7G>C | single nucleotide variant | not provided [RCV000979465] | Chr3:158644722 [GRCh38] Chr3:158362511 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1830C>T (p.Val610=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001832275]|not provided [RCV000980112] | Chr3:158684589 [GRCh38] Chr3:158402378 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_020169.4(LXN):c.641G>A (p.Arg214His) | single nucleotide variant | not provided [RCV000888145] | Chr3:158666674 [GRCh38] Chr3:158384463 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1308C>T (p.Asn436=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001272463]|not provided [RCV000917135] | Chr3:158660960 [GRCh38] Chr3:158378749 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1362A>G (p.Ala454=) | single nucleotide variant | not provided [RCV000978748] | Chr3:158662666 [GRCh38] Chr3:158380455 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2163G>A (p.Gln721=) | single nucleotide variant | not provided [RCV000928670] | Chr3:158691374 [GRCh38] Chr3:158409163 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2232T>C (p.Val744=) | single nucleotide variant | not provided [RCV000932821] | Chr3:158691443 [GRCh38] Chr3:158409232 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_020169.4(LXN):c.46G>A (p.Val16Met) | single nucleotide variant | not provided [RCV000957567] | Chr3:158672433 [GRCh38] Chr3:158390222 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1102T>C (p.Leu368=) | single nucleotide variant | GFM1-related disorder [RCV003950391]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001272462]|not provided [RCV000891379] | Chr3:158658940 [GRCh38] Chr3:158376729 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_020169.4(LXN):c.501G>A (p.Lys167=) | single nucleotide variant | not provided [RCV000891476] | Chr3:158669002 [GRCh38] Chr3:158386791 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1926A>G (p.Thr642=) | single nucleotide variant | not provided [RCV000934162] | Chr3:158690179 [GRCh38] Chr3:158407968 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1222-321A>G | single nucleotide variant | not provided [RCV001556710] | Chr3:158660553 [GRCh38] Chr3:158378342 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1381-39C>T | single nucleotide variant | not provided [RCV001541258] | Chr3:158665298 [GRCh38] Chr3:158383087 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.690-262del | deletion | not provided [RCV001718482] | Chr3:158651825 [GRCh38] Chr3:158369614 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.82-198G>A | single nucleotide variant | not provided [RCV001577980] | Chr3:158645431 [GRCh38] Chr3:158363220 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.344A>G (p.Asn115Ser) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001563841]|Inborn genetic diseases [RCV002568428]|not provided [RCV002072149] | Chr3:158646274 [GRCh38] Chr3:158364063 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.368-34T>A | single nucleotide variant | not provided [RCV001553401] | Chr3:158646709 [GRCh38] Chr3:158364498 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.82-118A>G | single nucleotide variant | not provided [RCV001555318] | Chr3:158645511 [GRCh38] Chr3:158363300 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1221+323T>C | single nucleotide variant | not provided [RCV001594310] | Chr3:158659382 [GRCh38] Chr3:158377171 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2125-26dup | duplication | not provided [RCV001684587] | Chr3:158691304..158691305 [GRCh38] Chr3:158409093..158409094 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.999-221A>T | single nucleotide variant | not provided [RCV001687456] | Chr3:158654326 [GRCh38] Chr3:158372115 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.81+282_81+283del | deletion | not provided [RCV001720847] | Chr3:158644981..158644982 [GRCh38] Chr3:158362770..158362771 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.841-224C>T | single nucleotide variant | not provided [RCV001652853] | Chr3:158653086 [GRCh38] Chr3:158370875 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.81+283del | deletion | not provided [RCV001676920] | Chr3:158644981 [GRCh38] Chr3:158362770 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1084-299A>T | single nucleotide variant | not provided [RCV001591585] | Chr3:158658623 [GRCh38] Chr3:158376412 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.81+281_81+283del | deletion | not provided [RCV001710206] | Chr3:158644981..158644983 [GRCh38] Chr3:158362770..158362772 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.958C>G (p.Pro320Ala) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001002678] | Chr3:158653427 [GRCh38] Chr3:158371216 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1922C>A (p.Ala641Glu) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001002679]|not provided [RCV004720762]|not specified [RCV004689951] | Chr3:158690175 [GRCh38] Chr3:158407964 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic|uncertain significance |
NM_024996.7(GFM1):c.596C>T (p.Ala199Val) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001149555] | Chr3:158649064 [GRCh38] Chr3:158366853 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.952C>T (p.Pro318Ser) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001089485]|not specified [RCV004702633] | Chr3:158653421 [GRCh38] Chr3:158371210 [GRCh37] Chr3:3q25.32 |
likely pathogenic|uncertain significance |
NM_024996.7(GFM1):c.*572A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001145362] | Chr3:158692039 [GRCh38] Chr3:158409828 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.748del (p.Arg250fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001580712] | Chr3:158652153 [GRCh38] Chr3:158369942 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
GRCh37/hg19 3q25.31-25.33(chr3:156812581-160154747)x3 | copy number gain | See cases [RCV001194528] | Chr3:156812581..160154747 [GRCh37] Chr3:3q25.31-25.33 |
uncertain significance |
GRCh37/hg19 3q22.3-26.1(chr3:138145289-162275610)x3 | copy number gain | See cases [RCV001194586] | Chr3:138145289..162275610 [GRCh37] Chr3:3q22.3-26.1 |
pathogenic |
NM_024996.7(GFM1):c.2125-32_2125-30del | deletion | not provided [RCV001588356] | Chr3:158691302..158691304 [GRCh38] Chr3:158409091..158409093 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1297_1300del (p.Asp433fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001002676]|not provided [RCV001384808] | Chr3:158660946..158660949 [GRCh38] Chr3:158378735..158378738 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1404del (p.Gly469fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001002677]|not provided [RCV001869432] | Chr3:158665357 [GRCh38] Chr3:158383146 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.234+187A>G | single nucleotide variant | not provided [RCV001649244] | Chr3:158645968 [GRCh38] Chr3:158363757 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1909+131C>T | single nucleotide variant | not provided [RCV001580833] | Chr3:158684799 [GRCh38] Chr3:158402588 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.81+22A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001543940]|not provided [RCV001655851] | Chr3:158644737 [GRCh38] Chr3:158362526 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1765-298A>G | single nucleotide variant | not provided [RCV001671826] | Chr3:158684226 [GRCh38] Chr3:158402015 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.840+317T>C | single nucleotide variant | not provided [RCV001581501] | Chr3:158652563 [GRCh38] Chr3:158370352 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2143A>G (p.Met715Val) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001827557]|not provided [RCV001665161] | Chr3:158691354 [GRCh38] Chr3:158409143 [GRCh37] Chr3:3q25.32 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_024996.7(GFM1):c.248A>T (p.Asp83Val) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001002680]|not provided [RCV003769390]|not specified [RCV004702570] | Chr3:158646178 [GRCh38] Chr3:158363967 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic|uncertain significance |
NM_024996.7(GFM1):c.1602-17dup | duplication | not provided [RCV001650768] | Chr3:158681968..158681969 [GRCh38] Chr3:158399757..158399758 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.486dup (p.Lys163fs) | duplication | not provided [RCV001211855] | Chr3:158646860..158646861 [GRCh38] Chr3:158364649..158364650 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.324C>A (p.Tyr108Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004570433]|not provided [RCV001204850] | Chr3:158646254 [GRCh38] Chr3:158364043 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_020169.4(LXN):c.570+1G>C | single nucleotide variant | See cases [RCV001197651] | Chr3:158667011 [GRCh38] Chr3:158384800 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.*116C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001149673]|not provided [RCV001569157] | Chr3:158691583 [GRCh38] Chr3:158409372 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.*164C>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001149674] | Chr3:158691631 [GRCh38] Chr3:158409420 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.701G>A (p.Arg234Gln) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001145270] | Chr3:158652107 [GRCh38] Chr3:158369896 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.*539C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001145361] | Chr3:158692006 [GRCh38] Chr3:158409795 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.735_747delinsTTAATTAATTAG (p.Ala246_His249delinsTer) | indel | not provided [RCV001247772] | Chr3:158652141..158652153 [GRCh38] Chr3:158369930..158369942 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.247_248del (p.Asp83fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003462686]|not provided [RCV001204932] | Chr3:158646176..158646177 [GRCh38] Chr3:158363965..158363966 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.749G>A (p.Arg250Gln) | single nucleotide variant | Developmental regression [RCV001090179]|not provided [RCV002555936]|not specified [RCV004526801] | Chr3:158652155 [GRCh38] Chr3:158369944 [GRCh37] Chr3:3q25.32 |
likely pathogenic|uncertain significance |
NM_024996.7(GFM1):c.2070+11T>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001148123]|not provided [RCV001673019] | Chr3:158690334 [GRCh38] Chr3:158408123 [GRCh37] Chr3:3q25.32 |
benign|likely benign |
NM_024996.7(GFM1):c.*429C>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001145360] | Chr3:158691896 [GRCh38] Chr3:158409685 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.443T>C (p.Val148Ala) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001280044]|not provided [RCV003481048] | Chr3:158646818 [GRCh38] Chr3:158364607 [GRCh37] Chr3:3q25.32 |
uncertain significance |
GRCh37/hg19 3q22.3-26.1(chr3:138173683-162494699) | copy number gain | Global developmental delay [RCV001352648] | Chr3:138173683..162494699 [GRCh37] Chr3:3q22.3-26.1 |
pathogenic |
NM_024996.7(GFM1):c.408A>T (p.Arg136Ser) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001329387] | Chr3:158646783 [GRCh38] Chr3:158364572 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.81+10C>T | single nucleotide variant | not provided [RCV001397212] | Chr3:158644725 [GRCh38] Chr3:158362514 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1466_1467del (p.Lys489fs) | deletion | not provided [RCV001382468] | Chr3:158665421..158665422 [GRCh38] Chr3:158383210..158383211 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.2055T>C (p.Phe685=) | single nucleotide variant | not provided [RCV001413778] | Chr3:158690308 [GRCh38] Chr3:158408097 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.996G>A (p.Glu332=) | single nucleotide variant | not provided [RCV001433935] | Chr3:158653465 [GRCh38] Chr3:158371254 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1823G>A (p.Arg608Gln) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001449604]|not provided [RCV001865913] | Chr3:158684582 [GRCh38] Chr3:158402371 [GRCh37] Chr3:3q25.32 |
pathogenic|uncertain significance |
NM_024996.7(GFM1):c.616G>T (p.Gly206Cys) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001280045] | Chr3:158649084 [GRCh38] Chr3:158366873 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1936C>T (p.Leu646Phe) | single nucleotide variant | not provided [RCV001354979] | Chr3:158690189 [GRCh38] Chr3:158407978 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1198C>T (p.Arg400Cys) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001280047]|not provided [RCV002542941] | Chr3:158659036 [GRCh38] Chr3:158376825 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1221+20G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001329385]|not provided [RCV003727981] | Chr3:158659079 [GRCh38] Chr3:158376868 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.825G>A (p.Ser275=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001280046] | Chr3:158652231 [GRCh38] Chr3:158370020 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.221C>G (p.Ala74Gly) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001280043] | Chr3:158645768 [GRCh38] Chr3:158363557 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.409G>A (p.Val137Met) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001449659] | Chr3:158646784 [GRCh38] Chr3:158364573 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.705T>C (p.Tyr235=) | single nucleotide variant | not provided [RCV001395108] | Chr3:158652111 [GRCh38] Chr3:158369900 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.738C>A (p.Ala246=) | single nucleotide variant | not provided [RCV001414114] | Chr3:158652144 [GRCh38] Chr3:158369933 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1324G>T (p.Glu442Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001329386] | Chr3:158662628 [GRCh38] Chr3:158380417 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.54C>A (p.Pro18=) | single nucleotide variant | not provided [RCV001495151] | Chr3:158644688 [GRCh38] Chr3:158362477 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1090C>T (p.Arg364Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003463027]|not provided [RCV001389333] | Chr3:158658928 [GRCh38] Chr3:158376717 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1188A>G (p.Gln396=) | single nucleotide variant | not provided [RCV001453582] | Chr3:158659026 [GRCh38] Chr3:158376815 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1893A>G (p.Glu631=) | single nucleotide variant | not provided [RCV001487128] | Chr3:158684652 [GRCh38] Chr3:158402441 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1782C>T (p.Cys594=) | single nucleotide variant | GFM1-related disorder [RCV003965956]|not provided [RCV001475138] | Chr3:158684541 [GRCh38] Chr3:158402330 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1473A>G (p.Thr491=) | single nucleotide variant | not provided [RCV001399353] | Chr3:158665429 [GRCh38] Chr3:158383218 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1818G>A (p.Gly606=) | single nucleotide variant | not provided [RCV001465651] | Chr3:158684577 [GRCh38] Chr3:158402366 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1686G>A (p.Glu562=) | single nucleotide variant | not provided [RCV001496388] | Chr3:158682079 [GRCh38] Chr3:158399868 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.540C>T (p.Gly180=) | single nucleotide variant | not provided [RCV001441608] | Chr3:158646915 [GRCh38] Chr3:158364704 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2061G>C (p.Leu687=) | single nucleotide variant | not provided [RCV001480179] | Chr3:158690314 [GRCh38] Chr3:158408103 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2178C>T (p.Ser726=) | single nucleotide variant | not provided [RCV001471711] | Chr3:158691389 [GRCh38] Chr3:158409178 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1035C>T (p.Ser345=) | single nucleotide variant | not provided [RCV001489057] | Chr3:158654583 [GRCh38] Chr3:158372372 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1152C>A (p.Ile384=) | single nucleotide variant | not provided [RCV001403439] | Chr3:158658990 [GRCh38] Chr3:158376779 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.792T>C (p.Leu264=) | single nucleotide variant | not provided [RCV001486867] | Chr3:158652198 [GRCh38] Chr3:158369987 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.279A>G (p.Glu93=) | single nucleotide variant | not provided [RCV001481138] | Chr3:158646209 [GRCh38] Chr3:158363998 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.234+1G>T | single nucleotide variant | not provided [RCV001376884] | Chr3:158645782 [GRCh38] Chr3:158363571 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1536T>C (p.Tyr512=) | single nucleotide variant | not provided [RCV001470423] | Chr3:158666321 [GRCh38] Chr3:158384110 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.873A>G (p.Ser291=) | single nucleotide variant | not provided [RCV001480744] | Chr3:158653342 [GRCh38] Chr3:158371131 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1311C>T (p.Ser437=) | single nucleotide variant | not provided [RCV001463594] | Chr3:158660963 [GRCh38] Chr3:158378752 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1350C>T (p.Val450=) | single nucleotide variant | not provided [RCV001485969] | Chr3:158662654 [GRCh38] Chr3:158380443 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.572+9C>A | single nucleotide variant | not provided [RCV001472408] | Chr3:158646956 [GRCh38] Chr3:158364745 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1371T>C (p.Pro457=) | single nucleotide variant | not provided [RCV001486231] | Chr3:158662675 [GRCh38] Chr3:158380464 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.504G>A (p.Pro168=) | single nucleotide variant | not provided [RCV001472584] | Chr3:158646879 [GRCh38] Chr3:158364668 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.426C>T (p.Val142=) | single nucleotide variant | not provided [RCV001493692] | Chr3:158646801 [GRCh38] Chr3:158364590 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2139C>T (p.Tyr713=) | single nucleotide variant | not provided [RCV001404300] | Chr3:158691350 [GRCh38] Chr3:158409139 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1161A>G (p.Thr387=) | single nucleotide variant | not provided [RCV001429908] | Chr3:158658999 [GRCh38] Chr3:158376788 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.612C>T (p.Pro204=) | single nucleotide variant | not provided [RCV001406692] | Chr3:158649080 [GRCh38] Chr3:158366869 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.324C>T (p.Tyr108=) | single nucleotide variant | not provided [RCV001412023] | Chr3:158646254 [GRCh38] Chr3:158364043 [GRCh37] Chr3:3q25.32 |
likely benign |
NC_000003.11:g.(?_158362414)_(158409266_?)del | deletion | not provided [RCV001382185] | Chr3:158362414..158409266 [GRCh37] Chr3:3q25.32 |
pathogenic |
NC_000003.11:g.(?_158380407)_(158384185_?)del | deletion | not provided [RCV001382186] | Chr3:158380407..158384185 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.465C>T (p.Thr155=) | single nucleotide variant | not provided [RCV001443507] | Chr3:158646840 [GRCh38] Chr3:158364629 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.168T>C (p.Asp56=) | single nucleotide variant | not provided [RCV001417337] | Chr3:158645715 [GRCh38] Chr3:158363504 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1434C>T (p.Pro478=) | single nucleotide variant | not provided [RCV001428010] | Chr3:158665390 [GRCh38] Chr3:158383179 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1910-2A>T | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001826130]|not provided [RCV001377756] | Chr3:158690161 [GRCh38] Chr3:158407950 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.999-1G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001836383]|not provided [RCV001377804] | Chr3:158654546 [GRCh38] Chr3:158372335 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.960A>G (p.Pro320=) | single nucleotide variant | not provided [RCV001418529] | Chr3:158653429 [GRCh38] Chr3:158371218 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1143T>C (p.Gly381=) | single nucleotide variant | not provided [RCV001400802] | Chr3:158658981 [GRCh38] Chr3:158376770 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.363T>C (p.Thr121=) | single nucleotide variant | not provided [RCV001446328] | Chr3:158646293 [GRCh38] Chr3:158364082 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1422A>G (p.Thr474=) | single nucleotide variant | not provided [RCV001417630] | Chr3:158665378 [GRCh38] Chr3:158383167 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.21A>G (p.Ala7=) | single nucleotide variant | not provided [RCV001409823] | Chr3:158644655 [GRCh38] Chr3:158362444 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.102A>C (p.Arg34=) | single nucleotide variant | not provided [RCV001410097] | Chr3:158645649 [GRCh38] Chr3:158363438 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1595_1596del (p.Pro532fs) | deletion | not provided [RCV001380497] | Chr3:158666380..158666381 [GRCh38] Chr3:158384169..158384170 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1299C>T (p.Asp433=) | single nucleotide variant | not provided [RCV001402707] | Chr3:158660951 [GRCh38] Chr3:158378740 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1346del (p.Pro449fs) | deletion | not provided [RCV001380852] | Chr3:158662649 [GRCh38] Chr3:158380438 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.54C>T (p.Pro18=) | single nucleotide variant | not provided [RCV001430658] | Chr3:158644688 [GRCh38] Chr3:158362477 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.840+10T>C | single nucleotide variant | not provided [RCV001407679] | Chr3:158652256 [GRCh38] Chr3:158370045 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.690-7T>C | single nucleotide variant | not provided [RCV001444576] | Chr3:158652089 [GRCh38] Chr3:158369878 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1263T>C (p.Phe421=) | single nucleotide variant | not provided [RCV001393349] | Chr3:158660915 [GRCh38] Chr3:158378704 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.81+1G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001831352]|not provided [RCV001378369] | Chr3:158644716 [GRCh38] Chr3:158362505 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.573-1G>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001831371]|not provided [RCV001379654] | Chr3:158649040 [GRCh38] Chr3:158366829 [GRCh37] Chr3:3q25.32 |
likely pathogenic|conflicting interpretations of pathogenicity |
NM_024996.7(GFM1):c.1329A>G (p.Ser443=) | single nucleotide variant | not provided [RCV001431564] | Chr3:158662633 [GRCh38] Chr3:158380422 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1381-9C>G | single nucleotide variant | not provided [RCV001431618] | Chr3:158665328 [GRCh38] Chr3:158383117 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1518+8del | deletion | not provided [RCV001406080] | Chr3:158665481 [GRCh38] Chr3:158383270 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2166A>G (p.Pro722=) | single nucleotide variant | not provided [RCV001445163] | Chr3:158691377 [GRCh38] Chr3:158409166 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1221+8C>T | single nucleotide variant | not provided [RCV001442918] | Chr3:158659067 [GRCh38] Chr3:158376856 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2012G>A (p.Arg671His) | single nucleotide variant | not provided [RCV001378703] | Chr3:158690265 [GRCh38] Chr3:158408054 [GRCh37] Chr3:3q25.32 |
likely pathogenic|likely benign |
NM_024996.7(GFM1):c.1765-94C>T | single nucleotide variant | not provided [RCV001575761] | Chr3:158684430 [GRCh38] Chr3:158402219 [GRCh37] Chr3:3q25.32 |
likely benign |
NC_000003.11:g.(?_158399774)_(158402467_?)del | deletion | not provided [RCV001382187] | Chr3:158399774..158402467 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.66C>G (p.Gly22=) | single nucleotide variant | not provided [RCV001505984] | Chr3:158644700 [GRCh38] Chr3:158362489 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2170T>C (p.Leu724=) | single nucleotide variant | not provided [RCV001469047] | Chr3:158691381 [GRCh38] Chr3:158409170 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1324-267G>A | single nucleotide variant | not provided [RCV001688426] | Chr3:158662361 [GRCh38] Chr3:158380150 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.690-96T>A | single nucleotide variant | not provided [RCV001675032] | Chr3:158652000 [GRCh38] Chr3:158369789 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1383C>T (p.Asn461=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001563842]|not provided [RCV001480040] | Chr3:158665339 [GRCh38] Chr3:158383128 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.689+200A>G | single nucleotide variant | not provided [RCV001608919] | Chr3:158649357 [GRCh38] Chr3:158367146 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1290A>G (p.Thr430=) | single nucleotide variant | not provided [RCV001497458] | Chr3:158660942 [GRCh38] Chr3:158378731 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1221+222T>C | single nucleotide variant | not provided [RCV001587965] | Chr3:158659281 [GRCh38] Chr3:158377070 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2125-5C>T | single nucleotide variant | not provided [RCV001453575] | Chr3:158691331 [GRCh38] Chr3:158409120 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.998+302dup | duplication | not provided [RCV001678979] | Chr3:158653757..158653758 [GRCh38] Chr3:158371546..158371547 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1881C>T (p.Ile627=) | single nucleotide variant | not provided [RCV001468192] | Chr3:158684640 [GRCh38] Chr3:158402429 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1005A>G (p.Ser335=) | single nucleotide variant | not provided [RCV001426857] | Chr3:158654553 [GRCh38] Chr3:158372342 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1222-3del | deletion | not provided [RCV001518467] | Chr3:158660865 [GRCh38] Chr3:158378654 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.998+7C>T | single nucleotide variant | not provided [RCV001469541] | Chr3:158653474 [GRCh38] Chr3:158371263 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1851C>T (p.His617=) | single nucleotide variant | GFM1-related disorder [RCV003973309]|not provided [RCV001450412] | Chr3:158684610 [GRCh38] Chr3:158402399 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.82-2A>C | single nucleotide variant | not provided [RCV001377847] | Chr3:158645627 [GRCh38] Chr3:158363416 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.368-6A>T | single nucleotide variant | not provided [RCV001473437] | Chr3:158646737 [GRCh38] Chr3:158364526 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.552C>T (p.Ala184=) | single nucleotide variant | not provided [RCV001455339] | Chr3:158646927 [GRCh38] Chr3:158364716 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.572+9C>T | single nucleotide variant | not provided [RCV001468613] | Chr3:158646956 [GRCh38] Chr3:158364745 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.39G>A (p.Gly13=) | single nucleotide variant | not provided [RCV001464314] | Chr3:158644673 [GRCh38] Chr3:158362462 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.861T>C (p.Thr287=) | single nucleotide variant | not provided [RCV001482082] | Chr3:158653330 [GRCh38] Chr3:158371119 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1576C>T (p.Arg526Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001831380]|not provided [RCV001381644] | Chr3:158666361 [GRCh38] Chr3:158384150 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1101A>G (p.Gln367=) | single nucleotide variant | not provided [RCV001483140] | Chr3:158658939 [GRCh38] Chr3:158376728 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.687T>C (p.Phe229=) | single nucleotide variant | not provided [RCV001451732] | Chr3:158649155 [GRCh38] Chr3:158366944 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.928T>C (p.Leu310=) | single nucleotide variant | not provided [RCV001502597] | Chr3:158653397 [GRCh38] Chr3:158371186 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1910-6A>C | single nucleotide variant | not provided [RCV001465981] | Chr3:158690157 [GRCh38] Chr3:158407946 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1665C>A (p.Val555=) | single nucleotide variant | not provided [RCV001417627] | Chr3:158682058 [GRCh38] Chr3:158399847 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.141A>C (p.Arg47=) | single nucleotide variant | not provided [RCV001417766] | Chr3:158645688 [GRCh38] Chr3:158363477 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1074T>C (p.Phe358=) | single nucleotide variant | not provided [RCV001432518] | Chr3:158654622 [GRCh38] Chr3:158372411 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1179A>T (p.Val393=) | single nucleotide variant | not provided [RCV001467891] | Chr3:158659017 [GRCh38] Chr3:158376806 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1857T>A (p.Val619=) | single nucleotide variant | not provided [RCV001432628] | Chr3:158684616 [GRCh38] Chr3:158402405 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.735G>A (p.Ala245=) | single nucleotide variant | not provided [RCV001419959] | Chr3:158652141 [GRCh38] Chr3:158369930 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1629A>T (p.Ser543=) | single nucleotide variant | not provided [RCV001418724] | Chr3:158682022 [GRCh38] Chr3:158399811 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1326G>A (p.Glu442=) | single nucleotide variant | not provided [RCV001489456] | Chr3:158662630 [GRCh38] Chr3:158380419 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.580C>T (p.Leu194=) | single nucleotide variant | not provided [RCV001456613] | Chr3:158649048 [GRCh38] Chr3:158366837 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1600C>T (p.Pro534Ser) | single nucleotide variant | not provided [RCV003108278] | Chr3:158666385 [GRCh38] Chr3:158384174 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1510del (p.Tyr504fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV001783359] | Chr3:158665466 [GRCh38] Chr3:158383255 [GRCh37] Chr3:3q25.32 |
pathogenic |
Single allele | duplication | not provided [RCV001784120] | Chr3:158305597..158428584 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.265A>G (p.Met89Val) | single nucleotide variant | not provided [RCV001752011] | Chr3:158646195 [GRCh38] Chr3:158363984 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1814C>T (p.Ser605Phe) | single nucleotide variant | not provided [RCV001752012] | Chr3:158684573 [GRCh38] Chr3:158402362 [GRCh37] Chr3:3q25.32 |
uncertain significance |
GRCh37/hg19 3q24-26.1(chr3:143439359-165252122)x1 | copy number loss | not provided [RCV001795847] | Chr3:143439359..165252122 [GRCh37] Chr3:3q24-26.1 |
pathogenic |
NM_024996.7(GFM1):c.1764+2T>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003989093] | Chr3:158682159 [GRCh38] Chr3:158399948 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1380+1G>T | single nucleotide variant | not provided [RCV002024883] | Chr3:158662685 [GRCh38] Chr3:158380474 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1167_1168insTT (p.Arg390fs) | insertion | not provided [RCV001891750] | Chr3:158659005..158659006 [GRCh38] Chr3:158376794..158376795 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1532_1533del (p.Glu511fs) | microsatellite | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003471167]|See cases [RCV002252739]|not provided [RCV001970149] | Chr3:158666313..158666314 [GRCh38] Chr3:158384102..158384103 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.890del (p.Leu297fs) | deletion | not provided [RCV001863844] | Chr3:158653355 [GRCh38] Chr3:158371144 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1874_1875del (p.Ser625fs) | microsatellite | not provided [RCV001914793] | Chr3:158684630..158684631 [GRCh38] Chr3:158402419..158402420 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1765-3C>T | single nucleotide variant | not provided [RCV001946515] | Chr3:158684521 [GRCh38] Chr3:158402310 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.97T>C (p.Cys33Arg) | single nucleotide variant | not provided [RCV001965306] | Chr3:158645644 [GRCh38] Chr3:158363433 [GRCh37] Chr3:3q25.32 |
uncertain significance |
GRCh37/hg19 3q24-25.33(chr3:145486960-160504834) | copy number gain | not specified [RCV002053375] | Chr3:145486960..160504834 [GRCh37] Chr3:3q24-25.33 |
pathogenic |
GRCh37/hg19 3q25.31-25.33(chr3:156768935-160158553) | copy number gain | not specified [RCV002053381] | Chr3:156768935..160158553 [GRCh37] Chr3:3q25.31-25.33 |
uncertain significance |
GRCh37/hg19 3q25.32(chr3:158060351-158665225) | copy number gain | not specified [RCV002053383] | Chr3:158060351..158665225 [GRCh37] Chr3:3q25.32 |
uncertain significance |
GRCh37/hg19 3q25.32-26.33(chr3:157128738-181637333) | copy number gain | not specified [RCV002053382] | Chr3:157128738..181637333 [GRCh37] Chr3:3q25.32-26.33 |
pathogenic |
NM_024996.7(GFM1):c.491G>A (p.Arg164His) | single nucleotide variant | not provided [RCV001986779] | Chr3:158646866 [GRCh38] Chr3:158364655 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.67T>A (p.Trp23Arg) | single nucleotide variant | not provided [RCV001913584] | Chr3:158644701 [GRCh38] Chr3:158362490 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.910A>G (p.Lys304Glu) | single nucleotide variant | not provided [RCV002044178] | Chr3:158653379 [GRCh38] Chr3:158371168 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1172del (p.Lys391fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003471067]|not provided [RCV001926961] | Chr3:158659008 [GRCh38] Chr3:158376797 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.2064del (p.Leu687_Tyr688insTer) | deletion | not provided [RCV001946822] | Chr3:158690317 [GRCh38] Chr3:158408106 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1544C>T (p.Pro515Leu) | single nucleotide variant | Inborn genetic diseases [RCV003289392]|not provided [RCV002021112] | Chr3:158666329 [GRCh38] Chr3:158384118 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1792C>T (p.Pro598Ser) | single nucleotide variant | not provided [RCV002020476] | Chr3:158684551 [GRCh38] Chr3:158402340 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NC_000003.12:g.158684526del | deletion | not provided [RCV001947230] | Chr3:158684523 [GRCh38] Chr3:158402312 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.612del (p.Met205fs) | deletion | not provided [RCV001999737] | Chr3:158649078 [GRCh38] Chr3:158366867 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.532C>T (p.Arg178Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003464305]|not provided [RCV001942340] | Chr3:158646907 [GRCh38] Chr3:158364696 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1468G>A (p.Glu490Lys) | single nucleotide variant | not provided [RCV001963402] | Chr3:158665424 [GRCh38] Chr3:158383213 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1186C>T (p.Gln396Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003464329]|not provided [RCV001963289] | Chr3:158659024 [GRCh38] Chr3:158376813 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.690-16A>G | single nucleotide variant | not provided [RCV001944300] | Chr3:158652080 [GRCh38] Chr3:158369869 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.367+3G>A | single nucleotide variant | not provided [RCV001887469] | Chr3:158646300 [GRCh38] Chr3:158364089 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1882C>T (p.Arg628Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003471141]|not provided [RCV002000104] | Chr3:158684641 [GRCh38] Chr3:158402430 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.69G>A (p.Trp23Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003464295]|not provided [RCV001941657] | Chr3:158644703 [GRCh38] Chr3:158362492 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.850C>T (p.Arg284Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003471142]|not provided [RCV002000204] | Chr3:158653319 [GRCh38] Chr3:158371108 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.769del (p.Val257fs) | deletion | not provided [RCV002000207] | Chr3:158652175 [GRCh38] Chr3:158369964 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1878del (p.Phe626fs) | deletion | not provided [RCV001990059] | Chr3:158684637 [GRCh38] Chr3:158402426 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.690_693del | deletion | GFM1-related disorder [RCV003416518]|Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV002506920]|not provided [RCV001932580] | Chr3:158652094..158652097 [GRCh38] Chr3:158369883..158369886 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.689+1G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003464159]|not provided [RCV002029942] | Chr3:158649158 [GRCh38] Chr3:158366947 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.89_99del (p.Trp30fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003146413]|not provided [RCV001953530] | Chr3:158645636..158645646 [GRCh38] Chr3:158363425..158363435 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.136dup (p.Ile46fs) | duplication | not provided [RCV001934484] | Chr3:158645677..158645678 [GRCh38] Chr3:158363466..158363467 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.649del (p.Ile218fs) | deletion | not provided [RCV001865113] | Chr3:158649117 [GRCh38] Chr3:158366906 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1642C>T (p.Gln548Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004571752]|not provided [RCV001951507] | Chr3:158682035 [GRCh38] Chr3:158399824 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.2125-6C>A | single nucleotide variant | not provided [RCV001955602] | Chr3:158691330 [GRCh38] Chr3:158409119 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.1765-2A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003471216]|not provided [RCV001973042] | Chr3:158684522 [GRCh38] Chr3:158402311 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1814C>G (p.Ser605Cys) | single nucleotide variant | not provided [RCV001996608] | Chr3:158684573 [GRCh38] Chr3:158402362 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.841-520_878del | deletion | not provided [RCV001973353] | Chr3:158652787..158653344 [GRCh38] Chr3:158370576..158371133 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.335A>G (p.Lys112Arg) | single nucleotide variant | not provided [RCV001936531] | Chr3:158646265 [GRCh38] Chr3:158364054 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.626G>A (p.Gly209Asp) | single nucleotide variant | not provided [RCV002028944] | Chr3:158649094 [GRCh38] Chr3:158366883 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1217del (p.Met406fs) | deletion | not provided [RCV001900022] | Chr3:158659055 [GRCh38] Chr3:158376844 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1415G>A (p.Arg472Lys) | single nucleotide variant | not provided [RCV001901406] | Chr3:158665371 [GRCh38] Chr3:158383160 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1015dup (p.Thr339fs) | duplication | not provided [RCV001972741] | Chr3:158654559..158654560 [GRCh38] Chr3:158372348..158372349 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.62T>C (p.Leu21Pro) | single nucleotide variant | not provided [RCV001951780] | Chr3:158644696 [GRCh38] Chr3:158362485 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1096_1099del (p.Gly366fs) | deletion | not provided [RCV001907173] | Chr3:158658934..158658937 [GRCh38] Chr3:158376723..158376726 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1834C>T (p.Gln612Ter) | single nucleotide variant | not provided [RCV001939353] | Chr3:158684593 [GRCh38] Chr3:158402382 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.898G>A (p.Ala300Thr) | single nucleotide variant | not provided [RCV001959726] | Chr3:158653367 [GRCh38] Chr3:158371156 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1199G>C (p.Arg400Pro) | single nucleotide variant | not provided [RCV001867300]|not specified [RCV003331220] | Chr3:158659037 [GRCh38] Chr3:158376826 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.928T>G (p.Leu310Val) | single nucleotide variant | not provided [RCV001956014] | Chr3:158653397 [GRCh38] Chr3:158371186 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.999-8A>C | single nucleotide variant | not provided [RCV002085588] | Chr3:158654539 [GRCh38] Chr3:158372328 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.186A>G (p.Leu62=) | single nucleotide variant | not provided [RCV002089464] | Chr3:158645733 [GRCh38] Chr3:158363522 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.235-7T>C | single nucleotide variant | not provided [RCV002205549] | Chr3:158646158 [GRCh38] Chr3:158363947 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.234+19T>A | single nucleotide variant | not provided [RCV002091628] | Chr3:158645800 [GRCh38] Chr3:158363589 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.930A>G (p.Leu310=) | single nucleotide variant | not provided [RCV002168064] | Chr3:158653399 [GRCh38] Chr3:158371188 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2151T>C (p.Tyr717=) | single nucleotide variant | not provided [RCV002130312] | Chr3:158691362 [GRCh38] Chr3:158409151 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.420T>C (p.Gly140=) | single nucleotide variant | not provided [RCV002168403] | Chr3:158646795 [GRCh38] Chr3:158364584 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.988A>G (p.Asn330Asp) | single nucleotide variant | not provided [RCV002105636] | Chr3:158653457 [GRCh38] Chr3:158371246 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.998+8T>G | single nucleotide variant | not provided [RCV002189515] | Chr3:158653475 [GRCh38] Chr3:158371264 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.87T>C (p.Asn29=) | single nucleotide variant | not provided [RCV002167393] | Chr3:158645634 [GRCh38] Chr3:158363423 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2121A>C (p.Thr707=) | single nucleotide variant | not provided [RCV002092324] | Chr3:158691189 [GRCh38] Chr3:158408978 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1617T>C (p.His539=) | single nucleotide variant | not provided [RCV002192250] | Chr3:158682010 [GRCh38] Chr3:158399799 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.471T>G (p.Thr157=) | single nucleotide variant | not provided [RCV002196107] | Chr3:158646846 [GRCh38] Chr3:158364635 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1584C>G (p.Thr528=) | single nucleotide variant | not provided [RCV002133951] | Chr3:158666369 [GRCh38] Chr3:158384158 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.762T>A (p.Ile254=) | single nucleotide variant | not provided [RCV002133956] | Chr3:158652168 [GRCh38] Chr3:158369957 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1168A>C (p.Arg390=) | single nucleotide variant | not provided [RCV002211835] | Chr3:158659006 [GRCh38] Chr3:158376795 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1872C>A (p.Ile624=) | single nucleotide variant | not provided [RCV002215019] | Chr3:158684631 [GRCh38] Chr3:158402420 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1518+7A>G | single nucleotide variant | not provided [RCV002196358] | Chr3:158665481 [GRCh38] Chr3:158383270 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.720T>A (p.Ala240=) | single nucleotide variant | not provided [RCV002131016] | Chr3:158652126 [GRCh38] Chr3:158369915 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1910-4C>T | single nucleotide variant | not provided [RCV002192202] | Chr3:158690159 [GRCh38] Chr3:158407948 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1078C>T (p.Leu360=) | single nucleotide variant | not provided [RCV002113849] | Chr3:158654626 [GRCh38] Chr3:158372415 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.406A>C (p.Arg136=) | single nucleotide variant | not provided [RCV002150999] | Chr3:158646781 [GRCh38] Chr3:158364570 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-12C>A | single nucleotide variant | not provided [RCV002095430] | Chr3:158646731 [GRCh38] Chr3:158364520 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.171T>C (p.Ser57=) | single nucleotide variant | GFM1-related disorder [RCV003893206]|not provided [RCV002213263] | Chr3:158645718 [GRCh38] Chr3:158363507 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1083+7T>G | single nucleotide variant | not provided [RCV002164925] | Chr3:158654638 [GRCh38] Chr3:158372427 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.36G>C (p.Leu12=) | single nucleotide variant | not provided [RCV002131106] | Chr3:158644670 [GRCh38] Chr3:158362459 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2070+7A>G | single nucleotide variant | not provided [RCV002195265] | Chr3:158690330 [GRCh38] Chr3:158408119 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.724T>C (p.Leu242=) | single nucleotide variant | not provided [RCV002197082] | Chr3:158652130 [GRCh38] Chr3:158369919 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1910-6del | deletion | not provided [RCV002138823] | Chr3:158690156 [GRCh38] Chr3:158407945 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2040A>G (p.Gly680=) | single nucleotide variant | not provided [RCV002141793] | Chr3:158690293 [GRCh38] Chr3:158408082 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1083+8G>A | single nucleotide variant | not provided [RCV002158784] | Chr3:158654639 [GRCh38] Chr3:158372428 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1935T>A (p.Ile645=) | single nucleotide variant | not provided [RCV002140307] | Chr3:158690188 [GRCh38] Chr3:158407977 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.12G>C (p.Leu4=) | single nucleotide variant | not provided [RCV002101653] | Chr3:158644646 [GRCh38] Chr3:158362435 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1222-3dup | duplication | not provided [RCV002154062] | Chr3:158660864..158660865 [GRCh38] Chr3:158378653..158378654 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1140G>A (p.Lys380=) | single nucleotide variant | not provided [RCV002163318] | Chr3:158658978 [GRCh38] Chr3:158376767 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1910-6dup | duplication | not provided [RCV002119691] | Chr3:158690155..158690156 [GRCh38] Chr3:158407944..158407945 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1707T>C (p.Phe569=) | single nucleotide variant | not provided [RCV002158193] | Chr3:158682100 [GRCh38] Chr3:158399889 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2129A>G (p.Lys710Arg) | single nucleotide variant | not provided [RCV002135887] | Chr3:158691340 [GRCh38] Chr3:158409129 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1524G>A (p.Leu508=) | single nucleotide variant | not provided [RCV002081778] | Chr3:158666309 [GRCh38] Chr3:158384098 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1917A>C (p.Ala639=) | single nucleotide variant | not provided [RCV002122497] | Chr3:158690170 [GRCh38] Chr3:158407959 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2226T>C (p.Leu742=) | single nucleotide variant | not provided [RCV002140380] | Chr3:158691437 [GRCh38] Chr3:158409226 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2079A>G (p.Leu693=) | single nucleotide variant | not provided [RCV002099277] | Chr3:158691147 [GRCh38] Chr3:158408936 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-13_368-12delinsAA | indel | not provided [RCV002138645] | Chr3:158646730..158646731 [GRCh38] Chr3:158364519..158364520 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.933T>C (p.Asp311=) | single nucleotide variant | not provided [RCV002202101] | Chr3:158653402 [GRCh38] Chr3:158371191 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.690-17A>G | single nucleotide variant | not provided [RCV002100547] | Chr3:158652079 [GRCh38] Chr3:158369868 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.367+7T>C | single nucleotide variant | not provided [RCV002200391] | Chr3:158646304 [GRCh38] Chr3:158364093 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2160T>C (p.Tyr720=) | single nucleotide variant | not provided [RCV002141255] | Chr3:158691371 [GRCh38] Chr3:158409160 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.732G>A (p.Ala244=) | single nucleotide variant | not provided [RCV002178196] | Chr3:158652138 [GRCh38] Chr3:158369927 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2058A>G (p.Thr686=) | single nucleotide variant | not provided [RCV002157741] | Chr3:158690311 [GRCh38] Chr3:158408100 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1998A>T (p.Ala666=) | single nucleotide variant | not provided [RCV002218731] | Chr3:158690251 [GRCh38] Chr3:158408040 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.757C>T (p.Leu253=) | single nucleotide variant | not provided [RCV002103878] | Chr3:158652163 [GRCh38] Chr3:158369952 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.981T>A (p.Ala327=) | single nucleotide variant | not provided [RCV002198916] | Chr3:158653450 [GRCh38] Chr3:158371239 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2073C>T (p.Val691=) | single nucleotide variant | not provided [RCV002156850] | Chr3:158691141 [GRCh38] Chr3:158408930 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.699T>C (p.Val233=) | single nucleotide variant | not provided [RCV002158659] | Chr3:158652105 [GRCh38] Chr3:158369894 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1909+10G>A | single nucleotide variant | not provided [RCV002141819] | Chr3:158684678 [GRCh38] Chr3:158402467 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1084-8A>G | single nucleotide variant | not provided [RCV002141829] | Chr3:158658914 [GRCh38] Chr3:158376703 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1222-8T>G | single nucleotide variant | not provided [RCV002204181] | Chr3:158660866 [GRCh38] Chr3:158378655 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1519-6T>C | single nucleotide variant | not provided [RCV002180433] | Chr3:158666298 [GRCh38] Chr3:158384087 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.81+3A>G | single nucleotide variant | not provided [RCV003118187] | Chr3:158644718 [GRCh38] Chr3:158362507 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.114del (p.Gly39_Val40insTer) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003459779]|not provided [RCV003112759] | Chr3:158645661 [GRCh38] Chr3:158363450 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic|conflicting interpretations of pathogenicity |
NM_024996.7(GFM1):c.2034A>G (p.Gln678=) | single nucleotide variant | not provided [RCV003121796] | Chr3:158690287 [GRCh38] Chr3:158408076 [GRCh37] Chr3:3q25.32 |
likely benign |
NC_000003.11:g.(?_158407942)_(158409266_?)del | deletion | not provided [RCV003122738] | Chr3:158407942..158409266 [GRCh37] Chr3:3q25.32 |
pathogenic |
NC_000003.11:g.(?_158376701)_(158409266_?)del | deletion | not provided [RCV003122739] | Chr3:158376701..158409266 [GRCh37] Chr3:3q25.32 |
pathogenic |
NC_000003.11:g.(?_158362424)_(158409256_?)dup | duplication | not provided [RCV003122740] | Chr3:158362424..158409256 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NC_000003.11:g.(?_158399764)_(158409256_?)dup | duplication | not provided [RCV003122741] | Chr3:158399764..158409256 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.754G>A (p.Glu252Lys) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003148198] | Chr3:158652160 [GRCh38] Chr3:158369949 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.72G>C (p.Gln24His) | single nucleotide variant | not provided [RCV003156519] | Chr3:158644706 [GRCh38] Chr3:158362495 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1213A>G (p.Met405Val) | single nucleotide variant | Inborn genetic diseases [RCV003239327]|not provided [RCV003156516] | Chr3:158659051 [GRCh38] Chr3:158376840 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.830C>T (p.Ser277Phe) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003131016] | Chr3:158652236 [GRCh38] Chr3:158370025 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.153C>G (p.Ile51Met) | single nucleotide variant | not provided [RCV002265387] | Chr3:158645700 [GRCh38] Chr3:158363489 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1484G>C (p.Gly495Ala) | single nucleotide variant | not provided [RCV002297333] | Chr3:158665440 [GRCh38] Chr3:158383229 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.228G>T (p.Met76Ile) | single nucleotide variant | not provided [RCV002288093] | Chr3:158645775 [GRCh38] Chr3:158363564 [GRCh37] Chr3:3q25.32 |
uncertain significance |
GRCh37/hg19 3q13.31-26.31(chr3:116620308-172042292)x3 | copy number gain | not provided [RCV002472621] | Chr3:116620308..172042292 [GRCh37] Chr3:3q13.31-26.31 |
pathogenic |
NM_024996.7(GFM1):c.1897G>C (p.Ala633Pro) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV002465084] | Chr3:158684656 [GRCh38] Chr3:158402445 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1393A>T (p.Lys465Ter) | single nucleotide variant | not provided [RCV002681379] | Chr3:158665349 [GRCh38] Chr3:158383138 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.679G>A (p.Gly227Arg) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003153203] | Chr3:158649147 [GRCh38] Chr3:158366936 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.575C>A (p.Ser192Tyr) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003148553] | Chr3:158649043 [GRCh38] Chr3:158366832 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.2167T>C (p.Cys723Arg) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003233002] | Chr3:158691378 [GRCh38] Chr3:158409167 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.318C>T (p.Ala106=) | single nucleotide variant | not provided [RCV002726384] | Chr3:158646248 [GRCh38] Chr3:158364037 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1740G>A (p.Lys580=) | single nucleotide variant | not provided [RCV002858191] | Chr3:158682133 [GRCh38] Chr3:158399922 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1601C>T (p.Pro534Leu) | single nucleotide variant | not provided [RCV003074295] | Chr3:158666386 [GRCh38] Chr3:158384175 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.998+2T>G | single nucleotide variant | not provided [RCV002858685] | Chr3:158653469 [GRCh38] Chr3:158371258 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1374T>A (p.Ser458=) | single nucleotide variant | not provided [RCV002971224] | Chr3:158662678 [GRCh38] Chr3:158380467 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1084-7C>T | single nucleotide variant | not provided [RCV002972275] | Chr3:158658915 [GRCh38] Chr3:158376704 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.662G>A (p.Arg221Gln) | single nucleotide variant | not provided [RCV003075974] | Chr3:158649130 [GRCh38] Chr3:158366919 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.642T>C (p.Ile214=) | single nucleotide variant | not provided [RCV002858305] | Chr3:158649110 [GRCh38] Chr3:158366899 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1623_1624insG (p.Gln542fs) | insertion | not provided [RCV003017440] | Chr3:158682016..158682017 [GRCh38] Chr3:158399805..158399806 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.2022A>T (p.Val674=) | single nucleotide variant | not provided [RCV002863365] | Chr3:158690275 [GRCh38] Chr3:158408064 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1519-16del | deletion | not provided [RCV002908119] | Chr3:158666285 [GRCh38] Chr3:158384074 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_020169.4(LXN):c.560T>C (p.Ile187Thr) | single nucleotide variant | not specified [RCV004152933] | Chr3:158667022 [GRCh38] Chr3:158384811 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_020169.4(LXN):c.52C>G (p.Gln18Glu) | single nucleotide variant | not specified [RCV004171106] | Chr3:158672427 [GRCh38] Chr3:158390216 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.707G>A (p.Gly236Asp) | single nucleotide variant | not provided [RCV003073598] | Chr3:158652113 [GRCh38] Chr3:158369902 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.999-4dup | duplication | not provided [RCV002838875] | Chr3:158654539..158654540 [GRCh38] Chr3:158372328..158372329 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.406A>G (p.Arg136Gly) | single nucleotide variant | not provided [RCV002996092] | Chr3:158646781 [GRCh38] Chr3:158364570 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1294A>G (p.Thr432Ala) | single nucleotide variant | not provided [RCV002996462] | Chr3:158660946 [GRCh38] Chr3:158378735 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.817A>G (p.Ile273Val) | single nucleotide variant | not provided [RCV003013561] | Chr3:158652223 [GRCh38] Chr3:158370012 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.307C>T (p.Gln103Ter) | single nucleotide variant | not provided [RCV002756445] | Chr3:158646237 [GRCh38] Chr3:158364026 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1305C>A (p.Ala435=) | single nucleotide variant | not provided [RCV002842561] | Chr3:158660957 [GRCh38] Chr3:158378746 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1201A>G (p.Met401Val) | single nucleotide variant | Inborn genetic diseases [RCV002779416] | Chr3:158659039 [GRCh38] Chr3:158376828 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1239T>A (p.Tyr413Ter) | single nucleotide variant | not provided [RCV002996717] | Chr3:158660891 [GRCh38] Chr3:158378680 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.975C>T (p.Asn325=) | single nucleotide variant | not provided [RCV003034976] | Chr3:158653444 [GRCh38] Chr3:158371233 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.459C>T (p.Cys153=) | single nucleotide variant | not provided [RCV002996750] | Chr3:158646834 [GRCh38] Chr3:158364623 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.291A>G (p.Gln97=) | single nucleotide variant | not provided [RCV002863585] | Chr3:158646221 [GRCh38] Chr3:158364010 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.689+8C>T | single nucleotide variant | not provided [RCV002908073] | Chr3:158649165 [GRCh38] Chr3:158366954 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1380+7G>C | single nucleotide variant | not provided [RCV002995466] | Chr3:158662691 [GRCh38] Chr3:158380480 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2125-22_2125-20del | deletion | not provided [RCV002640582] | Chr3:158691314..158691316 [GRCh38] Chr3:158409103..158409105 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1474_1480del (p.Val492fs) | deletion | not provided [RCV002913854] | Chr3:158665430..158665436 [GRCh38] Chr3:158383219..158383225 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.2082T>C (p.Asn694=) | single nucleotide variant | not provided [RCV002846498] | Chr3:158691150 [GRCh38] Chr3:158408939 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.931G>A (p.Asp311Asn) | single nucleotide variant | not provided [RCV002824408] | Chr3:158653400 [GRCh38] Chr3:158371189 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1043A>T (p.Asp348Val) | single nucleotide variant | not provided [RCV002640645] | Chr3:158654591 [GRCh38] Chr3:158372380 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.894A>G (p.Gly298=) | single nucleotide variant | not provided [RCV002786128] | Chr3:158653363 [GRCh38] Chr3:158371152 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.690-18A>G | single nucleotide variant | not provided [RCV002785659] | Chr3:158652078 [GRCh38] Chr3:158369867 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.796G>T (p.Glu266Ter) | single nucleotide variant | not provided [RCV002979277] | Chr3:158652202 [GRCh38] Chr3:158369991 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.435C>T (p.Leu145=) | single nucleotide variant | not provided [RCV002781563] | Chr3:158646810 [GRCh38] Chr3:158364599 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2142A>C (p.Thr714=) | single nucleotide variant | not provided [RCV002885045] | Chr3:158691353 [GRCh38] Chr3:158409142 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1037G>A (p.Ser346Asn) | single nucleotide variant | not provided [RCV002820841] | Chr3:158654585 [GRCh38] Chr3:158372374 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1222-13T>C | single nucleotide variant | not provided [RCV003100409] | Chr3:158660861 [GRCh38] Chr3:158378650 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1080G>A (p.Leu360=) | single nucleotide variant | not provided [RCV002796305] | Chr3:158654628 [GRCh38] Chr3:158372417 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1914G>T (p.Leu638Phe) | single nucleotide variant | not provided [RCV002796836] | Chr3:158690167 [GRCh38] Chr3:158407956 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1236A>G (p.Val412=) | single nucleotide variant | not provided [RCV003053332] | Chr3:158660888 [GRCh38] Chr3:158378677 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1589del (p.Thr530fs) | deletion | not provided [RCV002848233] | Chr3:158666374 [GRCh38] Chr3:158384163 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1324-15del | deletion | not provided [RCV002694934] | Chr3:158662610 [GRCh38] Chr3:158380399 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1046A>G (p.Asn349Ser) | single nucleotide variant | Inborn genetic diseases [RCV002761930] | Chr3:158654594 [GRCh38] Chr3:158372383 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.980C>G (p.Ala327Gly) | single nucleotide variant | Inborn genetic diseases [RCV002845093] | Chr3:158653449 [GRCh38] Chr3:158371238 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1909+9G>C | single nucleotide variant | not provided [RCV002590637] | Chr3:158684677 [GRCh38] Chr3:158402466 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1403A>G (p.Lys468Arg) | single nucleotide variant | not provided [RCV002912910] | Chr3:158665359 [GRCh38] Chr3:158383148 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1585A>G (p.Ile529Val) | single nucleotide variant | Inborn genetic diseases [RCV004632128]|not provided [RCV002976587] | Chr3:158666370 [GRCh38] Chr3:158384159 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.82-4del | deletion | not provided [RCV002571655] | Chr3:158645619 [GRCh38] Chr3:158363408 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.604C>T (p.Gln202Ter) | single nucleotide variant | not provided [RCV002847382] | Chr3:158649072 [GRCh38] Chr3:158366861 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1406del (p.Gly469fs) | deletion | not provided [RCV002866766] | Chr3:158665361 [GRCh38] Chr3:158383150 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.840+4A>G | single nucleotide variant | not provided [RCV002979847] | Chr3:158652250 [GRCh38] Chr3:158370039 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.990T>C (p.Asn330=) | single nucleotide variant | not provided [RCV002959109] | Chr3:158653459 [GRCh38] Chr3:158371248 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.268G>C (p.Asp90His) | single nucleotide variant | Inborn genetic diseases [RCV002803410] | Chr3:158646198 [GRCh38] Chr3:158363987 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1539C>T (p.Gly513=) | single nucleotide variant | not provided [RCV003026143] | Chr3:158666324 [GRCh38] Chr3:158384113 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1831dup (p.Leu611fs) | duplication | not provided [RCV002933367] | Chr3:158684588..158684589 [GRCh38] Chr3:158402377..158402378 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.2184A>G (p.Gln728=) | single nucleotide variant | not provided [RCV003085092] | Chr3:158691395 [GRCh38] Chr3:158409184 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1221+8_1221+9del | deletion | not provided [RCV003024735] | Chr3:158659066..158659067 [GRCh38] Chr3:158376855..158376856 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1461G>C (p.Glu487Asp) | single nucleotide variant | not provided [RCV003042248] | Chr3:158665417 [GRCh38] Chr3:158383206 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1091G>A (p.Arg364Gln) | single nucleotide variant | Inborn genetic diseases [RCV002985257]|not provided [RCV002985256] | Chr3:158658929 [GRCh38] Chr3:158376718 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1384G>A (p.Asp462Asn) | single nucleotide variant | not provided [RCV003083807] | Chr3:158665340 [GRCh38] Chr3:158383129 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.2071-10T>C | single nucleotide variant | not provided [RCV003056297] | Chr3:158691129 [GRCh38] Chr3:158408918 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.750G>T (p.Arg250=) | single nucleotide variant | not provided [RCV003023483] | Chr3:158652156 [GRCh38] Chr3:158369945 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1601+17A>C | single nucleotide variant | not provided [RCV002851955] | Chr3:158666403 [GRCh38] Chr3:158384192 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1324G>C (p.Glu442Gln) | single nucleotide variant | not provided [RCV003083523] | Chr3:158662628 [GRCh38] Chr3:158380417 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1222-7T>G | single nucleotide variant | not provided [RCV002667838] | Chr3:158660867 [GRCh38] Chr3:158378656 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1738A>G (p.Lys580Glu) | single nucleotide variant | not provided [RCV002982735] | Chr3:158682131 [GRCh38] Chr3:158399920 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.2215A>G (p.Thr739Ala) | single nucleotide variant | Inborn genetic diseases [RCV002787923] | Chr3:158691426 [GRCh38] Chr3:158409215 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.185T>G (p.Leu62Ter) | single nucleotide variant | not provided [RCV003084624] | Chr3:158645732 [GRCh38] Chr3:158363521 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.303dup (p.Ile102fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004572498]|not provided [RCV002985505] | Chr3:158646232..158646233 [GRCh38] Chr3:158364021..158364022 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1363A>G (p.Met455Val) | single nucleotide variant | not provided [RCV002573685] | Chr3:158662667 [GRCh38] Chr3:158380456 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1335T>C (p.His445=) | single nucleotide variant | not provided [RCV002805270] | Chr3:158662639 [GRCh38] Chr3:158380428 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1126G>T (p.Gly376Ter) | single nucleotide variant | not provided [RCV002790803] | Chr3:158658964 [GRCh38] Chr3:158376753 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.441T>A (p.Ala147=) | single nucleotide variant | not provided [RCV003083905] | Chr3:158646816 [GRCh38] Chr3:158364605 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2236A>G (p.Lys746Glu) | single nucleotide variant | not provided [RCV002627528] | Chr3:158691447 [GRCh38] Chr3:158409236 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.490C>T (p.Arg164Cys) | single nucleotide variant | not provided [RCV003064618] | Chr3:158646865 [GRCh38] Chr3:158364654 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.715C>T (p.Pro239Ser) | single nucleotide variant | not provided [RCV002900169] | Chr3:158652121 [GRCh38] Chr3:158369910 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.367+20T>G | single nucleotide variant | not provided [RCV003031311] | Chr3:158646317 [GRCh38] Chr3:158364106 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1677G>A (p.Leu559=) | single nucleotide variant | not provided [RCV003044023] | Chr3:158682070 [GRCh38] Chr3:158399859 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2130G>A (p.Lys710=) | single nucleotide variant | not provided [RCV003049342] | Chr3:158691341 [GRCh38] Chr3:158409130 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-2A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003465945]|not provided [RCV003065787] | Chr3:158646741 [GRCh38] Chr3:158364530 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.319A>G (p.Thr107Ala) | single nucleotide variant | Inborn genetic diseases [RCV002792804] | Chr3:158646249 [GRCh38] Chr3:158364038 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.2238A>G (p.Lys746=) | single nucleotide variant | not provided [RCV003008370] | Chr3:158691449 [GRCh38] Chr3:158409238 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.90G>T (p.Trp30Cys) | single nucleotide variant | Inborn genetic diseases [RCV004632166]|not provided [RCV003065079] | Chr3:158645637 [GRCh38] Chr3:158363426 [GRCh37] Chr3:3q25.32 |
likely benign|uncertain significance |
NM_024996.7(GFM1):c.2100C>T (p.Ser700=) | single nucleotide variant | not provided [RCV002646335] | Chr3:158691168 [GRCh38] Chr3:158408957 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1380+1G>A | single nucleotide variant | not provided [RCV003061825] | Chr3:158662685 [GRCh38] Chr3:158380474 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.2071-8G>C | single nucleotide variant | not provided [RCV003045450] | Chr3:158691131 [GRCh38] Chr3:158408920 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.807G>C (p.Leu269=) | single nucleotide variant | not provided [RCV003026956] | Chr3:158652213 [GRCh38] Chr3:158370002 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.703T>A (p.Tyr235Asn) | single nucleotide variant | not provided [RCV002598896] | Chr3:158652109 [GRCh38] Chr3:158369898 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1380+2T>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003459734]|not provided [RCV003063372] | Chr3:158662686 [GRCh38] Chr3:158380475 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.2103T>C (p.Thr701=) | single nucleotide variant | not provided [RCV002962381] | Chr3:158691171 [GRCh38] Chr3:158408960 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.332G>A (p.Trp111Ter) | single nucleotide variant | not provided [RCV003029326] | Chr3:158646262 [GRCh38] Chr3:158364051 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.2009G>A (p.Arg670Gln) | single nucleotide variant | not provided [RCV003060461] | Chr3:158690262 [GRCh38] Chr3:158408051 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.551C>T (p.Ala184Val) | single nucleotide variant | Inborn genetic diseases [RCV002648298] | Chr3:158646926 [GRCh38] Chr3:158364715 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.2112G>A (p.Arg704=) | single nucleotide variant | not provided [RCV003044134] | Chr3:158691180 [GRCh38] Chr3:158408969 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.153C>T (p.Ile51=) | single nucleotide variant | not provided [RCV002675718] | Chr3:158645700 [GRCh38] Chr3:158363489 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1350C>G (p.Val450=) | single nucleotide variant | not provided [RCV002899339] | Chr3:158662654 [GRCh38] Chr3:158380443 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.502C>T (p.Pro168Ser) | single nucleotide variant | not provided [RCV002806140] | Chr3:158646877 [GRCh38] Chr3:158364666 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1634del (p.Gly545fs) | deletion | not provided [RCV003030184] | Chr3:158682026 [GRCh38] Chr3:158399815 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.573-18T>A | single nucleotide variant | not provided [RCV002630010] | Chr3:158649023 [GRCh38] Chr3:158366812 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.684C>T (p.Asp228=) | single nucleotide variant | not provided [RCV003009801] | Chr3:158649152 [GRCh38] Chr3:158366941 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.595G>T (p.Ala199Ser) | single nucleotide variant | Inborn genetic diseases [RCV003170768]|not provided [RCV002963035] | Chr3:158649063 [GRCh38] Chr3:158366852 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.82-4dup | duplication | not provided [RCV002627557] | Chr3:158645618..158645619 [GRCh38] Chr3:158363407..158363408 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.841-4G>A | single nucleotide variant | not provided [RCV002601713] | Chr3:158653306 [GRCh38] Chr3:158371095 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1470_1471del (p.Glu490fs) | microsatellite | not provided [RCV003045382] | Chr3:158665423..158665424 [GRCh38] Chr3:158383212..158383213 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.360T>C (p.Asp120=) | single nucleotide variant | not provided [RCV002601813] | Chr3:158646290 [GRCh38] Chr3:158364079 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.657G>A (p.Glu219=) | single nucleotide variant | not provided [RCV002962820] | Chr3:158649125 [GRCh38] Chr3:158366914 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.631T>C (p.Phe211Leu) | single nucleotide variant | Inborn genetic diseases [RCV002920851] | Chr3:158649099 [GRCh38] Chr3:158366888 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.2215A>C (p.Thr739Pro) | single nucleotide variant | Inborn genetic diseases [RCV003068579]|not provided [RCV003068580] | Chr3:158691426 [GRCh38] Chr3:158409215 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1199G>A (p.Arg400His) | single nucleotide variant | not provided [RCV003093129] | Chr3:158659037 [GRCh38] Chr3:158376826 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.552C>G (p.Ala184=) | single nucleotide variant | not provided [RCV003070146] | Chr3:158646927 [GRCh38] Chr3:158364716 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1222-10G>A | single nucleotide variant | not provided [RCV003049778] | Chr3:158660864 [GRCh38] Chr3:158378653 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.817dup (p.Ile273fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003464582]|not provided [RCV002680697] | Chr3:158652217..158652218 [GRCh38] Chr3:158370006..158370007 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1056A>G (p.Pro352=) | single nucleotide variant | not provided [RCV002588636] | Chr3:158654604 [GRCh38] Chr3:158372393 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1632dup (p.Gly545fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003465956]|not provided [RCV003070265] | Chr3:158682024..158682025 [GRCh38] Chr3:158399813..158399814 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.666C>T (p.Ala222=) | single nucleotide variant | not provided [RCV002604437] | Chr3:158649134 [GRCh38] Chr3:158366923 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.824C>T (p.Ser275Leu) | single nucleotide variant | not provided [RCV002634889] | Chr3:158652230 [GRCh38] Chr3:158370019 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1519-10C>T | single nucleotide variant | not provided [RCV002589839] | Chr3:158666294 [GRCh38] Chr3:158384083 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1821C>A (p.Leu607=) | single nucleotide variant | not provided [RCV003050777] | Chr3:158684580 [GRCh38] Chr3:158402369 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_020169.4(LXN):c.391C>G (p.Pro131Ala) | single nucleotide variant | not specified [RCV004096908] | Chr3:158669112 [GRCh38] Chr3:158386901 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1577G>A (p.Arg526Gln) | single nucleotide variant | not provided [RCV003072100] | Chr3:158666362 [GRCh38] Chr3:158384151 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1684G>C (p.Glu562Gln) | single nucleotide variant | Inborn genetic diseases [RCV003299779] | Chr3:158682077 [GRCh38] Chr3:158399866 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_020169.4(LXN):c.80C>T (p.Thr27Ile) | single nucleotide variant | not specified [RCV004255611] | Chr3:158672399 [GRCh38] Chr3:158390188 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.137T>A (p.Ile46Lys) | single nucleotide variant | not provided [RCV003221588] | Chr3:158645684 [GRCh38] Chr3:158363473 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1209C>A (p.Ala403=) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003135362] | Chr3:158659047 [GRCh38] Chr3:158376836 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.982A>G (p.Ile328Val) | single nucleotide variant | Inborn genetic diseases [RCV003204080] | Chr3:158653451 [GRCh38] Chr3:158371240 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.130G>A (p.Glu44Lys) | single nucleotide variant | not provided [RCV003221587] | Chr3:158645677 [GRCh38] Chr3:158363466 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NC_000003.11:g.(158384176_158399783)_(158410362_?)dup | duplication | not specified [RCV003324238] | Chr3:158399783..158410362 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.28G>T (p.Ala10Ser) | single nucleotide variant | not provided [RCV003323006] | Chr3:158644662 [GRCh38] Chr3:158362451 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.152T>G (p.Ile51Ser) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003340925] | Chr3:158645699 [GRCh38] Chr3:158363488 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.114_115del (p.Val40fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461701]|not provided [RCV003779037] | Chr3:158645661..158645662 [GRCh38] Chr3:158363450..158363451 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1303dup (p.Ala435fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461703] | Chr3:158660954..158660955 [GRCh38] Chr3:158378743..158378744 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1799del (p.Ser600fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461705] | Chr3:158684558 [GRCh38] Chr3:158402347 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1951del (p.Ala651fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468276] | Chr3:158690203 [GRCh38] Chr3:158407992 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.368-2A>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468271] | Chr3:158646741 [GRCh38] Chr3:158364530 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1193T>C (p.Leu398Pro) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468269]|not specified [RCV004587497] | Chr3:158659031 [GRCh38] Chr3:158376820 [GRCh37] Chr3:3q25.32 |
likely pathogenic|uncertain significance |
NM_024996.7(GFM1):c.1132C>G (p.Leu378Val) | single nucleotide variant | Inborn genetic diseases [RCV003365978] | Chr3:158658970 [GRCh38] Chr3:158376759 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.379T>C (p.Phe127Leu) | single nucleotide variant | Inborn genetic diseases [RCV003375051] | Chr3:158646754 [GRCh38] Chr3:158364543 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.579dup (p.Leu194fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461693] | Chr3:158649044..158649045 [GRCh38] Chr3:158366833..158366834 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.909del (p.Asn303fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461698] | Chr3:158653378 [GRCh38] Chr3:158371167 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.81+17A>G | single nucleotide variant | not provided [RCV003873146] | Chr3:158644732 [GRCh38] Chr3:158362521 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1981C>T (p.Gln661Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468280] | Chr3:158690234 [GRCh38] Chr3:158408023 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.381del (p.Phe127fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468273] | Chr3:158646756 [GRCh38] Chr3:158364545 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.787C>T (p.Gln263Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468267]|not provided [RCV003699108] | Chr3:158652193 [GRCh38] Chr3:158369982 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1758A>G (p.Val586=) | single nucleotide variant | not provided [RCV003712524] | Chr3:158682151 [GRCh38] Chr3:158399940 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1905_1908del (p.Gln636fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461686] | Chr3:158684662..158684665 [GRCh38] Chr3:158402451..158402454 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.136del (p.Ile46fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461695] | Chr3:158645678 [GRCh38] Chr3:158363467 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.974del (p.Asn325fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461707]|not provided [RCV003708805] | Chr3:158653442 [GRCh38] Chr3:158371231 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.690-13T>C | single nucleotide variant | not provided [RCV003873467] | Chr3:158652083 [GRCh38] Chr3:158369872 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.573-18T>C | single nucleotide variant | not provided [RCV003874638] | Chr3:158649023 [GRCh38] Chr3:158366812 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.573-17G>A | single nucleotide variant | not provided [RCV003874087] | Chr3:158649024 [GRCh38] Chr3:158366813 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.626del (p.Gly209fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468268] | Chr3:158649092 [GRCh38] Chr3:158366881 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.702A>C (p.Arg234=) | single nucleotide variant | not provided [RCV003570064] | Chr3:158652108 [GRCh38] Chr3:158369897 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-15C>A | single nucleotide variant | not provided [RCV003570529] | Chr3:158646728 [GRCh38] Chr3:158364517 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1910-13T>A | single nucleotide variant | not provided [RCV003686415] | Chr3:158690150 [GRCh38] Chr3:158407939 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1764+18T>C | single nucleotide variant | not provided [RCV003872691] | Chr3:158682175 [GRCh38] Chr3:158399964 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1399dup (p.Ser467fs) | duplication | not provided [RCV003543609] | Chr3:158665351..158665352 [GRCh38] Chr3:158383140..158383141 [GRCh37] Chr3:3q25.32 |
pathogenic |
GRCh37/hg19 3q25.32(chr3:158405217-158775879)x1 | copy number loss | not provided [RCV003485403] | Chr3:158405217..158775879 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.2071-14_2071-13del | deletion | not provided [RCV003543076] | Chr3:158691124..158691125 [GRCh38] Chr3:158408913..158408914 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2077C>T (p.Leu693=) | single nucleotide variant | not provided [RCV003571314] | Chr3:158691145 [GRCh38] Chr3:158408934 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.900C>T (p.Ala300=) | single nucleotide variant | not provided [RCV003875561] | Chr3:158653369 [GRCh38] Chr3:158371158 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1525G>T (p.Glu509Ter) | single nucleotide variant | GFM1-related disorder [RCV003422468]|not provided [RCV003720905] | Chr3:158666310 [GRCh38] Chr3:158384099 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.1157dup (p.Asn386fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468274] | Chr3:158658993..158658994 [GRCh38] Chr3:158376782..158376783 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.154_155del (p.Ala53fs) | microsatellite | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468270] | Chr3:158645699..158645700 [GRCh38] Chr3:158363488..158363489 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1516C>T (p.Gln506Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461687] | Chr3:158665472 [GRCh38] Chr3:158383261 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1044_1056del (p.Asn349fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461689] | Chr3:158654591..158654603 [GRCh38] Chr3:158372380..158372392 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.705T>G (p.Tyr235Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461692] | Chr3:158652111 [GRCh38] Chr3:158369900 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.573-2A>G | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461694] | Chr3:158649039 [GRCh38] Chr3:158366828 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.929T>G (p.Leu310Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461699] | Chr3:158653398 [GRCh38] Chr3:158371187 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.113_116dup (p.Val40fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461700] | Chr3:158645659..158645660 [GRCh38] Chr3:158363448..158363449 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.53C>T (p.Pro18Leu) | single nucleotide variant | not provided [RCV003481716] | Chr3:158644687 [GRCh38] Chr3:158362476 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1909+2T>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461691] | Chr3:158684670 [GRCh38] Chr3:158402459 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.362_367delinsTT (p.Thr121fs) | indel | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461697] | Chr3:158646292..158646297 [GRCh38] Chr3:158364081..158364086 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.324C>G (p.Tyr108Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461706] | Chr3:158646254 [GRCh38] Chr3:158364043 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.689+2T>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468277] | Chr3:158649159 [GRCh38] Chr3:158366948 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.367+1G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461688] | Chr3:158646298 [GRCh38] Chr3:158364087 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.914del (p.Gly305fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461690] | Chr3:158653382 [GRCh38] Chr3:158371171 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.725T>G (p.Leu242Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461702]|not provided [RCV003661061] | Chr3:158652131 [GRCh38] Chr3:158369920 [GRCh37] Chr3:3q25.32 |
pathogenic|likely pathogenic |
NM_024996.7(GFM1):c.527T>A (p.Leu176Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003461704] | Chr3:158646902 [GRCh38] Chr3:158364691 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.851G>A (p.Arg284Gln) | single nucleotide variant | GFM1-related disorder [RCV003412009] | Chr3:158653320 [GRCh38] Chr3:158371109 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.88T>G (p.Trp30Gly) | single nucleotide variant | not provided [RCV003434784] | Chr3:158645635 [GRCh38] Chr3:158363424 [GRCh37] Chr3:3q25.32 |
likely benign |
Single allele | duplication | not provided [RCV003448680] | Chr3:140154329..197847235 [GRCh37] Chr3:3q23-29 |
pathogenic |
NM_024996.7(GFM1):c.999-1G>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468275] | Chr3:158654546 [GRCh38] Chr3:158372335 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.361dup (p.Thr121fs) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468278] | Chr3:158646290..158646291 [GRCh38] Chr3:158364079..158364080 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.636del (p.Gly213fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468279] | Chr3:158649102 [GRCh38] Chr3:158366891 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1381-1G>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV003468272] | Chr3:158665336 [GRCh38] Chr3:158383125 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1764+1G>T | single nucleotide variant | GFM1-related disorder [RCV003416882] | Chr3:158682158 [GRCh38] Chr3:158399947 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.2155A>G (p.Arg719Gly) | single nucleotide variant | GFM1-related disorder [RCV003405778] | Chr3:158691366 [GRCh38] Chr3:158409155 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.572+7A>G | single nucleotide variant | not provided [RCV003877616] | Chr3:158646954 [GRCh38] Chr3:158364743 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1182G>A (p.Arg394=) | single nucleotide variant | not provided [RCV003579600] | Chr3:158659020 [GRCh38] Chr3:158376809 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1084-15A>C | single nucleotide variant | not provided [RCV003740060] | Chr3:158658907 [GRCh38] Chr3:158376696 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1287C>T (p.Asp429=) | single nucleotide variant | not provided [RCV003579027] | Chr3:158660939 [GRCh38] Chr3:158378728 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1765-20T>C | single nucleotide variant | not provided [RCV003576314] | Chr3:158684504 [GRCh38] Chr3:158402293 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1324-9dup | duplication | not provided [RCV003738982] | Chr3:158662613..158662614 [GRCh38] Chr3:158380402..158380403 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.27C>T (p.Val9=) | single nucleotide variant | not provided [RCV003576919] | Chr3:158644661 [GRCh38] Chr3:158362450 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.303T>C (p.Thr101=) | single nucleotide variant | not provided [RCV003576999] | Chr3:158646233 [GRCh38] Chr3:158364022 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.690-19A>G | single nucleotide variant | not provided [RCV003878994] | Chr3:158652077 [GRCh38] Chr3:158369866 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.235-9dup | duplication | not provided [RCV003547513] | Chr3:158646154..158646155 [GRCh38] Chr3:158363943..158363944 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.572+15A>C | single nucleotide variant | not provided [RCV003826643] | Chr3:158646962 [GRCh38] Chr3:158364751 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1791C>T (p.Gly597=) | single nucleotide variant | not provided [RCV003544815] | Chr3:158684550 [GRCh38] Chr3:158402339 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.402C>G (p.Ala134=) | single nucleotide variant | not provided [RCV003572978] | Chr3:158646777 [GRCh38] Chr3:158364566 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1764+17del | deletion | not provided [RCV003575714] | Chr3:158682174 [GRCh38] Chr3:158399963 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.82-16C>G | single nucleotide variant | not provided [RCV003546434] | Chr3:158645613 [GRCh38] Chr3:158363402 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.213C>T (p.Gly71=) | single nucleotide variant | not provided [RCV003824848] | Chr3:158645760 [GRCh38] Chr3:158363549 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.18T>G (p.Ala6=) | single nucleotide variant | not provided [RCV003694129] | Chr3:158644652 [GRCh38] Chr3:158362441 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1909+18A>G | single nucleotide variant | not provided [RCV003575271] | Chr3:158684686 [GRCh38] Chr3:158402475 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1601+7A>G | single nucleotide variant | not provided [RCV003716483] | Chr3:158666393 [GRCh38] Chr3:158384182 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.295G>T (p.Gly99Ter) | single nucleotide variant | not provided [RCV003692030] | Chr3:158646225 [GRCh38] Chr3:158364014 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.753G>A (p.Gln251=) | single nucleotide variant | not provided [RCV003693413] | Chr3:158652159 [GRCh38] Chr3:158369948 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-11_368-9del | deletion | not provided [RCV003576705] | Chr3:158646730..158646732 [GRCh38] Chr3:158364519..158364521 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.82-11A>G | single nucleotide variant | not provided [RCV003574668] | Chr3:158645618 [GRCh38] Chr3:158363407 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.582A>C (p.Leu194=) | single nucleotide variant | not provided [RCV003686516] | Chr3:158649050 [GRCh38] Chr3:158366839 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1910-22_1910-20del | deletion | not provided [RCV003715625] | Chr3:158690141..158690143 [GRCh38] Chr3:158407930..158407932 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2125-9A>C | single nucleotide variant | not provided [RCV003692292] | Chr3:158691327 [GRCh38] Chr3:158409116 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1815T>C (p.Ser605=) | single nucleotide variant | not provided [RCV003686614] | Chr3:158684574 [GRCh38] Chr3:158402363 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1242C>G (p.Ala414=) | single nucleotide variant | not provided [RCV003577166] | Chr3:158660894 [GRCh38] Chr3:158378683 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2019G>T (p.Gly673=) | single nucleotide variant | not provided [RCV003544224] | Chr3:158690272 [GRCh38] Chr3:158408061 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1601+16A>C | single nucleotide variant | not provided [RCV003572306] | Chr3:158666402 [GRCh38] Chr3:158384191 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1083+14T>C | single nucleotide variant | not provided [RCV003572815] | Chr3:158654645 [GRCh38] Chr3:158372434 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.367+14T>C | single nucleotide variant | not provided [RCV003578042] | Chr3:158646311 [GRCh38] Chr3:158364100 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.841-168_844delinsCTTTCTTCTT | indel | not provided [RCV003572911] | Chr3:158653142..158653313 [GRCh38] Chr3:158370931..158371102 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1452dup (p.Asp485Ter) | duplication | not provided [RCV003690160] | Chr3:158665405..158665406 [GRCh38] Chr3:158383194..158383195 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.576T>G (p.Ser192=) | single nucleotide variant | not provided [RCV003690161] | Chr3:158649044 [GRCh38] Chr3:158366833 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2071-1G>C | single nucleotide variant | not provided [RCV003694885] | Chr3:158691138 [GRCh38] Chr3:158408927 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.850C>A (p.Arg284=) | single nucleotide variant | not provided [RCV003691509] | Chr3:158653319 [GRCh38] Chr3:158371108 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.612C>G (p.Pro204=) | single nucleotide variant | not provided [RCV003544403] | Chr3:158649080 [GRCh38] Chr3:158366869 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1512T>C (p.Tyr504=) | single nucleotide variant | not provided [RCV003688793] | Chr3:158665468 [GRCh38] Chr3:158383257 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-1G>C | single nucleotide variant | not provided [RCV003575767] | Chr3:158646742 [GRCh38] Chr3:158364531 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1601+13C>T | single nucleotide variant | not provided [RCV003738948] | Chr3:158666399 [GRCh38] Chr3:158384188 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.747C>T (p.His249=) | single nucleotide variant | not provided [RCV003696162] | Chr3:158652153 [GRCh38] Chr3:158369942 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1602-8_1602-7del | deletion | not provided [RCV003693237] | Chr3:158681986..158681987 [GRCh38] Chr3:158399775..158399776 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1479A>T (p.Ile493=) | single nucleotide variant | not provided [RCV003739854] | Chr3:158665435 [GRCh38] Chr3:158383224 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1890A>G (p.Gly630=) | single nucleotide variant | not provided [RCV003739855] | Chr3:158684649 [GRCh38] Chr3:158402438 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.999-19A>G | single nucleotide variant | not provided [RCV003876412] | Chr3:158654528 [GRCh38] Chr3:158372317 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1416G>A (p.Arg472=) | single nucleotide variant | not provided [RCV003572242] | Chr3:158665372 [GRCh38] Chr3:158383161 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1084-19dup | duplication | not provided [RCV003572335] | Chr3:158658902..158658903 [GRCh38] Chr3:158376691..158376692 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.81+19G>T | single nucleotide variant | not provided [RCV003544289] | Chr3:158644734 [GRCh38] Chr3:158362523 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.690-11del | deletion | not provided [RCV003544609] | Chr3:158652083 [GRCh38] Chr3:158369872 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.249T>C (p.Asp83=) | single nucleotide variant | not provided [RCV003544573] | Chr3:158646179 [GRCh38] Chr3:158363968 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.204C>T (p.Tyr68=) | single nucleotide variant | not provided [RCV003876579] | Chr3:158645751 [GRCh38] Chr3:158363540 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1909+8G>A | single nucleotide variant | not provided [RCV003689998] | Chr3:158684676 [GRCh38] Chr3:158402465 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.885A>G (p.Val295=) | single nucleotide variant | not provided [RCV003688366] | Chr3:158653354 [GRCh38] Chr3:158371143 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1470G>A (p.Glu490=) | single nucleotide variant | not provided [RCV003716009] | Chr3:158665426 [GRCh38] Chr3:158383215 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.82-16C>T | single nucleotide variant | not provided [RCV003575302] | Chr3:158645613 [GRCh38] Chr3:158363402 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2031G>A (p.Gly677=) | single nucleotide variant | not provided [RCV003545325] | Chr3:158690284 [GRCh38] Chr3:158408073 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1731T>C (p.Asn577=) | single nucleotide variant | not provided [RCV003690516] | Chr3:158682124 [GRCh38] Chr3:158399913 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.207C>T (p.Tyr69=) | single nucleotide variant | not provided [RCV003717788] | Chr3:158645754 [GRCh38] Chr3:158363543 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.183A>G (p.Thr61=) | single nucleotide variant | not provided [RCV003850298] | Chr3:158645730 [GRCh38] Chr3:158363519 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1380+11G>A | single nucleotide variant | not provided [RCV003717903] | Chr3:158662695 [GRCh38] Chr3:158380484 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.82-13G>T | single nucleotide variant | not provided [RCV003740421] | Chr3:158645616 [GRCh38] Chr3:158363405 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1084-18C>A | single nucleotide variant | not provided [RCV003740420] | Chr3:158658904 [GRCh38] Chr3:158376693 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2124+20C>G | single nucleotide variant | not provided [RCV003740443] | Chr3:158691212 [GRCh38] Chr3:158409001 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.945A>G (p.Glu315=) | single nucleotide variant | not provided [RCV003834286] | Chr3:158653414 [GRCh38] Chr3:158371203 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2070+10C>G | single nucleotide variant | not provided [RCV003717357] | Chr3:158690333 [GRCh38] Chr3:158408122 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.82-15T>G | single nucleotide variant | not provided [RCV003717405] | Chr3:158645614 [GRCh38] Chr3:158363403 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1518+16_1518+19del | deletion | not provided [RCV003810715] | Chr3:158665487..158665490 [GRCh38] Chr3:158383276..158383279 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.82-13G>A | single nucleotide variant | not provided [RCV003562205] | Chr3:158645616 [GRCh38] Chr3:158363405 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.234+7dup | duplication | not provided [RCV003851410] | Chr3:158645787..158645788 [GRCh38] Chr3:158363576..158363577 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.367+11T>G | single nucleotide variant | not provided [RCV003703684] | Chr3:158646308 [GRCh38] Chr3:158364097 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2071-12G>A | single nucleotide variant | not provided [RCV003849551] | Chr3:158691127 [GRCh38] Chr3:158408916 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.998+10G>A | single nucleotide variant | not provided [RCV003852530] | Chr3:158653477 [GRCh38] Chr3:158371266 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1602-14T>A | single nucleotide variant | not provided [RCV003717145] | Chr3:158681981 [GRCh38] Chr3:158399770 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.572+17T>G | single nucleotide variant | not provided [RCV003726718] | Chr3:158646964 [GRCh38] Chr3:158364753 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.336A>G (p.Lys112=) | single nucleotide variant | not provided [RCV003697130] | Chr3:158646266 [GRCh38] Chr3:158364055 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2013C>T (p.Arg671=) | single nucleotide variant | not provided [RCV003663783] | Chr3:158690266 [GRCh38] Chr3:158408055 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.998+15T>C | single nucleotide variant | not provided [RCV003562175] | Chr3:158653482 [GRCh38] Chr3:158371271 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.171T>A (p.Ser57=) | single nucleotide variant | not provided [RCV003669047] | Chr3:158645718 [GRCh38] Chr3:158363507 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1381-11T>C | single nucleotide variant | not provided [RCV003561859] | Chr3:158665326 [GRCh38] Chr3:158383115 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.516T>C (p.Phe172=) | single nucleotide variant | not provided [RCV003580672] | Chr3:158646891 [GRCh38] Chr3:158364680 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1909+16del | deletion | not provided [RCV003725269] | Chr3:158684682 [GRCh38] Chr3:158402471 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.384A>G (p.Thr128=) | single nucleotide variant | not provided [RCV003702518] | Chr3:158646759 [GRCh38] Chr3:158364548 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1134A>G (p.Leu378=) | single nucleotide variant | not provided [RCV003700814] | Chr3:158658972 [GRCh38] Chr3:158376761 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.30G>A (p.Ala10=) | single nucleotide variant | not provided [RCV003836346] | Chr3:158644664 [GRCh38] Chr3:158362453 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1910-9T>G | single nucleotide variant | not provided [RCV003837849] | Chr3:158690154 [GRCh38] Chr3:158407943 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2028T>A (p.Thr676=) | single nucleotide variant | not provided [RCV003836634] | Chr3:158690281 [GRCh38] Chr3:158408070 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1765-12A>C | single nucleotide variant | not provided [RCV003724103] | Chr3:158684512 [GRCh38] Chr3:158402301 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1381-13T>C | single nucleotide variant | not provided [RCV003839430] | Chr3:158665324 [GRCh38] Chr3:158383113 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.999-9T>A | single nucleotide variant | not provided [RCV003671687] | Chr3:158654538 [GRCh38] Chr3:158372327 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2124+20C>A | single nucleotide variant | not provided [RCV003816486] | Chr3:158691212 [GRCh38] Chr3:158409001 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.363T>A (p.Thr121=) | single nucleotide variant | not provided [RCV003835551] | Chr3:158646293 [GRCh38] Chr3:158364082 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.831T>C (p.Ser277=) | single nucleotide variant | not provided [RCV003701586] | Chr3:158652237 [GRCh38] Chr3:158370026 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.234+13G>A | single nucleotide variant | not provided [RCV003833919] | Chr3:158645794 [GRCh38] Chr3:158363583 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.840+8C>T | single nucleotide variant | not provided [RCV003700127] | Chr3:158652254 [GRCh38] Chr3:158370043 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1909+7T>A | single nucleotide variant | not provided [RCV003668508] | Chr3:158684675 [GRCh38] Chr3:158402464 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.573-13T>C | single nucleotide variant | not provided [RCV003668881] | Chr3:158649028 [GRCh38] Chr3:158366817 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2070+1G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004574120]|not provided [RCV003558302] | Chr3:158690324 [GRCh38] Chr3:158408113 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.689+14A>C | single nucleotide variant | not provided [RCV003560381] | Chr3:158649171 [GRCh38] Chr3:158366960 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2172A>G (p.Leu724=) | single nucleotide variant | not provided [RCV003717006] | Chr3:158691383 [GRCh38] Chr3:158409172 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1026_1027insCC (p.Met343fs) | insertion | not provided [RCV003699507] | Chr3:158654574..158654575 [GRCh38] Chr3:158372363..158372364 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.402C>T (p.Ala134=) | single nucleotide variant | not provided [RCV003723608] | Chr3:158646777 [GRCh38] Chr3:158364566 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2247C>T (p.Ala749=) | single nucleotide variant | not provided [RCV003672122] | Chr3:158691458 [GRCh38] Chr3:158409247 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.789G>A (p.Gln263=) | single nucleotide variant | not provided [RCV003699725] | Chr3:158652195 [GRCh38] Chr3:158369984 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1083+8G>C | single nucleotide variant | not provided [RCV003580725] | Chr3:158654639 [GRCh38] Chr3:158372428 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1929A>G (p.Leu643=) | single nucleotide variant | not provided [RCV003580682] | Chr3:158690182 [GRCh38] Chr3:158407971 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1017C>T (p.Thr339=) | single nucleotide variant | not provided [RCV003723977] | Chr3:158654565 [GRCh38] Chr3:158372354 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.857del (p.Ala286fs) | deletion | not provided [RCV003858130] | Chr3:158653326 [GRCh38] Chr3:158371115 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.494A>G (p.Tyr165Cys) | single nucleotide variant | not provided [RCV003708864] | Chr3:158646869 [GRCh38] Chr3:158364658 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.558C>T (p.Ala186=) | single nucleotide variant | not provided [RCV003670755] | Chr3:158646933 [GRCh38] Chr3:158364722 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.998+1G>A | single nucleotide variant | not provided [RCV003542741] | Chr3:158653468 [GRCh38] Chr3:158371257 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1222-6T>C | single nucleotide variant | not provided [RCV003542115] | Chr3:158660868 [GRCh38] Chr3:158378657 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1812C>G (p.Leu604=) | single nucleotide variant | not provided [RCV003675875] | Chr3:158684571 [GRCh38] Chr3:158402360 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.774C>T (p.Ala258=) | single nucleotide variant | not provided [RCV003563516] | Chr3:158652180 [GRCh38] Chr3:158369969 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.82-14C>T | single nucleotide variant | not provided [RCV003823474] | Chr3:158645615 [GRCh38] Chr3:158363404 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2041G>C (p.Val681Leu) | single nucleotide variant | not provided [RCV003553713] | Chr3:158690294 [GRCh38] Chr3:158408083 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1221+1G>A | single nucleotide variant | not provided [RCV003704511] | Chr3:158659060 [GRCh38] Chr3:158376849 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1221+8C>G | single nucleotide variant | not provided [RCV003844134] | Chr3:158659067 [GRCh38] Chr3:158376856 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1183T>C (p.Leu395=) | single nucleotide variant | not provided [RCV003565999] | Chr3:158659021 [GRCh38] Chr3:158376810 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.367+15T>C | single nucleotide variant | not provided [RCV003864511] | Chr3:158646312 [GRCh38] Chr3:158364101 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1401A>G (p.Ser467=) | single nucleotide variant | not provided [RCV003735954] | Chr3:158665357 [GRCh38] Chr3:158383146 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2071-16_2071-14del | microsatellite | not provided [RCV003736079] | Chr3:158691120..158691122 [GRCh38] Chr3:158408909..158408911 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1324-18T>C | single nucleotide variant | not provided [RCV003712090] | Chr3:158662610 [GRCh38] Chr3:158380399 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1014A>G (p.Lys338=) | single nucleotide variant | not provided [RCV003706042] | Chr3:158654562 [GRCh38] Chr3:158372351 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.998+20T>C | single nucleotide variant | not provided [RCV003860831] | Chr3:158653487 [GRCh38] Chr3:158371276 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1324-14A>T | single nucleotide variant | not provided [RCV003683019] | Chr3:158662614 [GRCh38] Chr3:158380403 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.690-14A>G | single nucleotide variant | not provided [RCV003675924] | Chr3:158652082 [GRCh38] Chr3:158369871 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.948C>T (p.Tyr316=) | single nucleotide variant | not provided [RCV003862388] | Chr3:158653417 [GRCh38] Chr3:158371206 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.840+12C>T | single nucleotide variant | not provided [RCV003870720] | Chr3:158652258 [GRCh38] Chr3:158370047 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1338T>G (p.Val446=) | single nucleotide variant | not provided [RCV003684076] | Chr3:158662642 [GRCh38] Chr3:158380431 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1084-13T>C | single nucleotide variant | not provided [RCV003853166] | Chr3:158658909 [GRCh38] Chr3:158376698 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.81+18G>A | single nucleotide variant | not provided [RCV003722709] | Chr3:158644733 [GRCh38] Chr3:158362522 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.81+12T>C | single nucleotide variant | not provided [RCV003842256] | Chr3:158644727 [GRCh38] Chr3:158362516 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1222-9T>C | single nucleotide variant | not provided [RCV003679267] | Chr3:158660865 [GRCh38] Chr3:158378654 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1381-15C>A | single nucleotide variant | not provided [RCV003733995] | Chr3:158665322 [GRCh38] Chr3:158383111 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.572+1G>A | single nucleotide variant | not provided [RCV003684270] | Chr3:158646948 [GRCh38] Chr3:158364737 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1764+17G>A | single nucleotide variant | not provided [RCV003684282] | Chr3:158682174 [GRCh38] Chr3:158399963 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2125-17T>C | single nucleotide variant | not provided [RCV003723007] | Chr3:158691319 [GRCh38] Chr3:158409108 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-5T>C | single nucleotide variant | not provided [RCV003845795] | Chr3:158646738 [GRCh38] Chr3:158364527 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1222-14_1222-11del | deletion | not provided [RCV003736073] | Chr3:158660858..158660861 [GRCh38] Chr3:158378647..158378650 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1381-17TTC[2] | microsatellite | not provided [RCV003719599] | Chr3:158665320..158665322 [GRCh38] Chr3:158383109..158383111 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2125-4C>A | single nucleotide variant | not provided [RCV003721481] | Chr3:158691332 [GRCh38] Chr3:158409121 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.689+2del | deletion | not provided [RCV003721597] | Chr3:158649159 [GRCh38] Chr3:158366948 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1765-7T>C | single nucleotide variant | not provided [RCV003707203] | Chr3:158684517 [GRCh38] Chr3:158402306 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.999-7T>C | single nucleotide variant | not provided [RCV003867968] | Chr3:158654540 [GRCh38] Chr3:158372329 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1863T>C (p.Ser621=) | single nucleotide variant | not provided [RCV003709113] | Chr3:158684622 [GRCh38] Chr3:158402411 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1800T>C (p.Ser600=) | single nucleotide variant | not provided [RCV003870329] | Chr3:158684559 [GRCh38] Chr3:158402348 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.906G>A (p.Lys302=) | single nucleotide variant | not provided [RCV003872206] | Chr3:158653375 [GRCh38] Chr3:158371164 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1380+9T>C | single nucleotide variant | not provided [RCV003867071] | Chr3:158662693 [GRCh38] Chr3:158380482 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2241A>G (p.Gly747=) | single nucleotide variant | not provided [RCV003721111] | Chr3:158691452 [GRCh38] Chr3:158409241 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2205T>C (p.Tyr735=) | single nucleotide variant | not provided [RCV003685912] | Chr3:158691416 [GRCh38] Chr3:158409205 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.81+11A>G | single nucleotide variant | not provided [RCV003722534] | Chr3:158644726 [GRCh38] Chr3:158362515 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.234+2TA[5] | microsatellite | not provided [RCV003683928] | Chr3:158645782..158645783 [GRCh38] Chr3:158363571..158363572 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1602-2del | deletion | not provided [RCV003551696] | Chr3:158681993 [GRCh38] Chr3:158399782 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1909+14G>A | single nucleotide variant | not provided [RCV003719840] | Chr3:158684682 [GRCh38] Chr3:158402471 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1381-17T>C | single nucleotide variant | not provided [RCV003542625] | Chr3:158665320 [GRCh38] Chr3:158383109 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1222-10_1222-7del | deletion | not provided [RCV003685007] | Chr3:158660861..158660864 [GRCh38] Chr3:158378650..158378653 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.2025C>T (p.Ile675=) | single nucleotide variant | not provided [RCV003678709] | Chr3:158690278 [GRCh38] Chr3:158408067 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.367+15T>G | single nucleotide variant | not provided [RCV003568344] | Chr3:158646312 [GRCh38] Chr3:158364101 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1323+9T>C | single nucleotide variant | not provided [RCV003720430] | Chr3:158660984 [GRCh38] Chr3:158378773 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-14T>C | single nucleotide variant | not provided [RCV003728523] | Chr3:158646729 [GRCh38] Chr3:158364518 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.841-9C>A | single nucleotide variant | not provided [RCV003678930] | Chr3:158653301 [GRCh38] Chr3:158371090 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.689+20T>G | single nucleotide variant | not provided [RCV003738641] | Chr3:158649177 [GRCh38] Chr3:158366966 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.82-14C>G | single nucleotide variant | not provided [RCV003719545] | Chr3:158645615 [GRCh38] Chr3:158363404 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.841-10T>G | single nucleotide variant | not provided [RCV003674986] | Chr3:158653300 [GRCh38] Chr3:158371089 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.628A>G (p.Asn210Asp) | single nucleotide variant | not provided [RCV003562704] | Chr3:158649096 [GRCh38] Chr3:158366885 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.2125-28_2125-17del | deletion | not provided [RCV003821395] | Chr3:158691308..158691319 [GRCh38] Chr3:158409097..158409108 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1519-19T>C | single nucleotide variant | not provided [RCV003684466] | Chr3:158666285 [GRCh38] Chr3:158384074 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1536T>A (p.Tyr512Ter) | single nucleotide variant | not provided [RCV003704710] | Chr3:158666321 [GRCh38] Chr3:158384110 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.691C>T (p.Gln231Ter) | single nucleotide variant | not provided [RCV003819079] | Chr3:158652097 [GRCh38] Chr3:158369886 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_024996.7(GFM1):c.1083+10T>A | single nucleotide variant | not provided [RCV003709033] | Chr3:158654641 [GRCh38] Chr3:158372430 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1602-7C>T | single nucleotide variant | not provided [RCV003681026] | Chr3:158681988 [GRCh38] Chr3:158399777 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1519-15C>T | single nucleotide variant | not provided [RCV003679419] | Chr3:158666289 [GRCh38] Chr3:158384078 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.81+13A>G | single nucleotide variant | not provided [RCV003863946] | Chr3:158644728 [GRCh38] Chr3:158362517 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1519-1G>C | single nucleotide variant | not provided [RCV003856931] | Chr3:158666303 [GRCh38] Chr3:158384092 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.368-14_368-12del | deletion | not provided [RCV003820610] | Chr3:158646728..158646730 [GRCh38] Chr3:158364517..158364519 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1911C>T (p.Ala637=) | single nucleotide variant | not provided [RCV003567362] | Chr3:158690164 [GRCh38] Chr3:158407953 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1719A>G (p.Thr573=) | single nucleotide variant | not provided [RCV003554477] | Chr3:158682112 [GRCh38] Chr3:158399901 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1212C>T (p.Asp404=) | single nucleotide variant | not provided [RCV003864183] | Chr3:158659050 [GRCh38] Chr3:158376839 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1602-19_1602-18insC | insertion | not provided [RCV003542738] | Chr3:158681976..158681977 [GRCh38] Chr3:158399765..158399766 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.368-4T>G | single nucleotide variant | not provided [RCV003709304] | Chr3:158646739 [GRCh38] Chr3:158364528 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.367+13C>G | single nucleotide variant | not provided [RCV003707343] | Chr3:158646310 [GRCh38] Chr3:158364099 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1764+16del | deletion | not provided [RCV003679994] | Chr3:158682168 [GRCh38] Chr3:158399957 [GRCh37] Chr3:3q25.32 |
benign |
NM_024996.7(GFM1):c.1601+13C>A | single nucleotide variant | not provided [RCV003563649] | Chr3:158666399 [GRCh38] Chr3:158384188 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1765-11T>C | single nucleotide variant | not provided [RCV003735999] | Chr3:158684513 [GRCh38] Chr3:158402302 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1909+20C>T | single nucleotide variant | not provided [RCV003857330] | Chr3:158684688 [GRCh38] Chr3:158402477 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1602-18T>C | single nucleotide variant | not provided [RCV003679473] | Chr3:158681977 [GRCh38] Chr3:158399766 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.235-1G>A | single nucleotide variant | not provided [RCV003552647] | Chr3:158646164 [GRCh38] Chr3:158363953 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1554A>G (p.Thr518=) | single nucleotide variant | not provided [RCV003555066] | Chr3:158666339 [GRCh38] Chr3:158384128 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1221+16T>C | single nucleotide variant | not provided [RCV003734538] | Chr3:158659075 [GRCh38] Chr3:158376864 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1503G>T (p.Leu501=) | single nucleotide variant | GFM1-related disorder [RCV003964600] | Chr3:158665459 [GRCh38] Chr3:158383248 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.1910-9_1910-8del | deletion | GFM1-related disorder [RCV003934065] | Chr3:158690142..158690143 [GRCh38] Chr3:158407931..158407932 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.961T>C (p.Ser321Pro) | single nucleotide variant | not specified [RCV003988594] | Chr3:158653430 [GRCh38] Chr3:158371219 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.689+884T>C | single nucleotide variant | GFM1-related disorder [RCV003957290] | Chr3:158650041 [GRCh38] Chr3:158367830 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.102A>G (p.Arg34=) | single nucleotide variant | GFM1-related disorder [RCV003967162] | Chr3:158645649 [GRCh38] Chr3:158363438 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_024996.7(GFM1):c.548del (p.Pro183fs) | deletion | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004576679] | Chr3:158646921 [GRCh38] Chr3:158364710 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.287_288del (p.Arg96fs) | microsatellite | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004576680] | Chr3:158646212..158646213 [GRCh38] Chr3:158364001..158364002 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1548T>A (p.Cys516Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004576681] | Chr3:158666333 [GRCh38] Chr3:158384122 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.2097T>G (p.Tyr699Ter) | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004576683] | Chr3:158691165 [GRCh38] Chr3:158408954 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.2125-1G>A | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004576685] | Chr3:158691335 [GRCh38] Chr3:158409124 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1207G>A (p.Ala403Thr) | single nucleotide variant | Inborn genetic diseases [RCV004387794] | Chr3:158659045 [GRCh38] Chr3:158376834 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.614T>C (p.Met205Thr) | single nucleotide variant | Inborn genetic diseases [RCV004387796] | Chr3:158649082 [GRCh38] Chr3:158366871 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1535A>T (p.Tyr512Phe) | single nucleotide variant | Inborn genetic diseases [RCV004387795] | Chr3:158666320 [GRCh38] Chr3:158384109 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.323dup (p.Tyr108Ter) | duplication | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004576682] | Chr3:158646252..158646253 [GRCh38] Chr3:158364041..158364042 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NM_024996.7(GFM1):c.1083+1G>C | single nucleotide variant | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 [RCV004576684] | Chr3:158654632 [GRCh38] Chr3:158372421 [GRCh37] Chr3:3q25.32 |
likely pathogenic |
NC_000003.11:g.(?_158362424)_(158384195_?)del | deletion | not provided [RCV004582328] | Chr3:158362424..158384195 [GRCh37] Chr3:3q25.32 |
pathogenic |
NC_000003.11:g.(?_158362424)_(158370055_?)del | deletion | not provided [RCV004582329] | Chr3:158362424..158370055 [GRCh37] Chr3:3q25.32 |
pathogenic |
NC_000003.11:g.(?_158369865)_(158409256_?)del | deletion | not provided [RCV004582330] | Chr3:158369865..158409256 [GRCh37] Chr3:3q25.32 |
pathogenic |
NM_020169.4(LXN):c.208T>C (p.Cys70Arg) | single nucleotide variant | not specified [RCV004640299] | Chr3:158669595 [GRCh38] Chr3:158387384 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.73A>G (p.Arg25Gly) | single nucleotide variant | Inborn genetic diseases [RCV004626937] | Chr3:158644707 [GRCh38] Chr3:158362496 [GRCh37] Chr3:3q25.32 |
likely benign |
NM_020169.4(LXN):c.65A>G (p.Asn22Ser) | single nucleotide variant | not specified [RCV004640301] | Chr3:158672414 [GRCh38] Chr3:158390203 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_020169.4(LXN):c.322C>G (p.Gln108Glu) | single nucleotide variant | not specified [RCV004640302] | Chr3:158669481 [GRCh38] Chr3:158387270 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1138A>G (p.Lys380Glu) | single nucleotide variant | Inborn genetic diseases [RCV004626939] | Chr3:158658976 [GRCh38] Chr3:158376765 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.479G>A (p.Arg160His) | single nucleotide variant | Inborn genetic diseases [RCV004626936] | Chr3:158646854 [GRCh38] Chr3:158364643 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NC_000003.11:g.(?_158362315)_(158413371_?)dup | duplication | not specified [RCV004701149] | Chr3:158362315..158413371 [GRCh37] Chr3:3q25.32 |
uncertain significance |
NM_024996.7(GFM1):c.1511A>G (p.Tyr504Cys) | single nucleotide variant | not provided [RCV004763801] | uncertain significance | |
NM_024996.7(GFM1):c.1848C>A (p.His616Gln) | single nucleotide variant | not provided [RCV004760864] | uncertain significance |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH80464 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
RH102943 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
RH103335 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
RH70156 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
STS-N90141 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
sY3084 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
D1S1423 |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
D8S2279 |
|
adipose tissue
|
alimentary part of gastrointestinal system
|
appendage
|
circulatory system
|
ectoderm
|
endocrine system
|
endoderm
|
entire extraembryonic component
|
exocrine system
|
hemolymphoid system
|
hepatobiliary system
|
integumental system
|
mesenchyme
|
mesoderm
|
musculoskeletal system
|
nervous system
|
pharyngeal arch
|
renal system
|
reproductive system
|
respiratory system
|
sensory system
|
visual system
|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1204 | 2439 | 2788 | 2253 | 4974 | 1726 | 2351 | 6 | 624 | 1951 | 465 | 2270 | 7306 | 6472 | 53 | 3734 | 1 | 852 | 1744 | 1617 | 175 | 1 |
RefSeq Transcripts | NG_008441 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001308164 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001308166 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001374355 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001374356 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001374357 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001374358 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001374359 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001374360 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001374361 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_024996 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_164499 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_164500 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_164501 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_164502 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC025033 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AC080013 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AF309777 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AF367998 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK000780 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK022724 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK023694 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK092293 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK315031 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC049210 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH471052 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CP068275 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205226 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205227 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205228 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205229 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205230 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205231 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205232 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205233 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205234 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205235 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205236 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205237 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205238 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205239 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205240 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205241 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205242 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205243 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205244 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205245 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205246 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205247 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205248 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205249 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205250 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205251 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205252 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205253 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205254 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205255 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205256 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205257 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205258 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205259 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205260 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205261 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205262 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205263 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205264 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ205265 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
KU178816 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
KU178817 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENST00000264263 ⟹ ENSP00000264263 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000312756 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000464732 ⟹ ENSP00000417532 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000472383 ⟹ ENSP00000420272 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000477721 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000478251 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000478254 ⟹ ENSP00000417225 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000478576 ⟹ ENSP00000418755 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000481468 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000486715 ⟹ ENSP00000419038 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000490261 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | NM_001308164 ⟹ NP_001295093 | ||||||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
|
||||||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001308166 ⟹ NP_001295095 | ||||||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
|
||||||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001374355 ⟹ NP_001361284 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001374356 ⟹ NP_001361285 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001374357 ⟹ NP_001361286 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001374358 ⟹ NP_001361287 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001374359 ⟹ NP_001361288 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001374360 ⟹ NP_001361289 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001374361 ⟹ NP_001361290 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_024996 ⟹ NP_079272 | ||||||||||||||||||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
|
||||||||||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | NR_164499 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NR_164500 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NR_164501 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NR_164502 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
Protein RefSeqs | NP_001295093 | (Get FASTA) | NCBI Sequence Viewer |
NP_001295095 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001361284 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001361285 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001361286 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001361287 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001361288 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001361289 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001361290 | (Get FASTA) | NCBI Sequence Viewer | |
NP_079272 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH49210 | (Get FASTA) | NCBI Sequence Viewer |
AAK53402 | (Get FASTA) | NCBI Sequence Viewer | |
AAK58877 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90694 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90695 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90696 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90697 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90698 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90699 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90700 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90701 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90702 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90703 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90704 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90705 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90706 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90707 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90708 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90709 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90710 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90711 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90712 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90713 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90714 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90715 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90716 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90717 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90718 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90719 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90720 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90721 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90722 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90723 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90724 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90725 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90726 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90727 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90728 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90729 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90730 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90731 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90732 | (Get FASTA) | NCBI Sequence Viewer | |
ADP90733 | (Get FASTA) | NCBI Sequence Viewer | |
ALQ34274 | (Get FASTA) | NCBI Sequence Viewer | |
ALQ34275 | (Get FASTA) | NCBI Sequence Viewer | |
BAB14205 | (Get FASTA) | NCBI Sequence Viewer | |
BAG37516 | (Get FASTA) | NCBI Sequence Viewer | |
BAG52523 | (Get FASTA) | NCBI Sequence Viewer | |
EAW78677 | (Get FASTA) | NCBI Sequence Viewer | |
EAW78678 | (Get FASTA) | NCBI Sequence Viewer | |
EAW78679 | (Get FASTA) | NCBI Sequence Viewer | |
EAW78680 | (Get FASTA) | NCBI Sequence Viewer | |
EAW78681 | (Get FASTA) | NCBI Sequence Viewer | |
EAW78682 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSP00000264263 | ||
ENSP00000264263.5 | |||
ENSP00000417225.1 | |||
ENSP00000417532.1 | |||
ENSP00000418755 | |||
ENSP00000418755.1 | |||
ENSP00000419038 | |||
ENSP00000419038.1 | |||
ENSP00000420272.1 | |||
GenBank Protein | Q96RP9 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_079272 ⟸ NM_024996 |
- Peptide Label: | isoform 2 |
- UniProtKB: | Q6GTN2 (UniProtKB/Swiss-Prot), B3KRW1 (UniProtKB/Swiss-Prot), B2RCB9 (UniProtKB/Swiss-Prot), A6NCI9 (UniProtKB/Swiss-Prot), Q96T39 (UniProtKB/Swiss-Prot), Q96RP9 (UniProtKB/Swiss-Prot), E5KND5 (UniProtKB/TrEMBL), E5KND7 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001295093 ⟸ NM_001308164 |
- Peptide Label: | isoform 1 |
- UniProtKB: | E5KND7 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001295095 ⟸ NM_001308166 |
- Peptide Label: | isoform 3 |
- UniProtKB: | C9IZ01 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001361286 ⟸ NM_001374357 |
- Peptide Label: | isoform 6 |
- UniProtKB: | E5KND7 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001361284 ⟸ NM_001374355 |
- Peptide Label: | isoform 4 |
- UniProtKB: | E5KND7 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001361285 ⟸ NM_001374356 |
- Peptide Label: | isoform 5 |
- UniProtKB: | E5KND7 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001361288 ⟸ NM_001374359 |
- Peptide Label: | isoform 8 |
RefSeq Acc Id: | NP_001361289 ⟸ NM_001374360 |
- Peptide Label: | isoform 9 |
RefSeq Acc Id: | NP_001361290 ⟸ NM_001374361 |
- Peptide Label: | isoform 10 |
RefSeq Acc Id: | NP_001361287 ⟸ NM_001374358 |
- Peptide Label: | isoform 7 |
Ensembl Acc Id: | ENSP00000417532 ⟸ ENST00000464732 |
Ensembl Acc Id: | ENSP00000417225 ⟸ ENST00000478254 |
Ensembl Acc Id: | ENSP00000418755 ⟸ ENST00000478576 |
Ensembl Acc Id: | ENSP00000420272 ⟸ ENST00000472383 |
Ensembl Acc Id: | ENSP00000419038 ⟸ ENST00000486715 |
Ensembl Acc Id: | ENSP00000264263 ⟸ ENST00000264263 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q96RP9-F1-model_v2 | AlphaFold | Q96RP9 | 1-751 | view protein structure |
RGD ID: | 6866118 | ||||||||
Promoter ID: | EPDNEW_H6224 | ||||||||
Type: | initiation region | ||||||||
Name: | GFM1_1 | ||||||||
Description: | G elongation factor mitochondrial 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H6223 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
RGD ID: | 6800898 | ||||||||
Promoter ID: | HG_KWN:46567 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, K562, Lymphoblastoid, NB4 | ||||||||
Transcripts: | ENST00000264263, ENST00000312756, UC003FCD.2, UC003FCF.1 | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | HGNC:13780 | AgrOrtholog |
COSMIC | GFM1 | COSMIC |
Ensembl Genes | ENSG00000168827 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENST00000264263 | ENTREZGENE |
ENST00000264263.9 | UniProtKB/Swiss-Prot | |
ENST00000464732.1 | UniProtKB/TrEMBL | |
ENST00000472383.1 | UniProtKB/TrEMBL | |
ENST00000478254 | ENTREZGENE | |
ENST00000478254.5 | UniProtKB/TrEMBL | |
ENST00000478576 | ENTREZGENE | |
ENST00000478576.5 | UniProtKB/TrEMBL | |
ENST00000486715 | ENTREZGENE | |
ENST00000486715.6 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | 3.30.230.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
3.30.70.240 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
3.40.50.300 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Elongation Factor G (Translational Gtpase), domain 3 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Translation factors | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
GTEx | ENSG00000168827 | GTEx |
HGNC ID | HGNC:13780 | ENTREZGENE |
Human Proteome Map | GFM1 | Human Proteome Map |
InterPro | EFG_II | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
EFG_III | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
EFG_III/V | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
EFG_IV | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
EFG_V | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
EFG_V-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
EFTu-like_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
G_TR_CS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
P-loop_NTPase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Ribosomal_S5_D2-typ_fold | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Ribosomal_S5_D2-typ_fold_subgr | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Small_GTP-bd_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
TF_GTP-bd_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Transl_B-barrel_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Transl_elong_EFG/EF2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Transl_elong_EFG/EF2_IV | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | hsa:85476 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
NCBI Gene | 85476 | ENTREZGENE |
OMIM | 606639 | OMIM |
PANTHER | ELONGATION FACTOR G, MITOCHONDRIAL | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR43636 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | EFG_C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
EFG_II | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
EFG_IV | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
GTP_EFTU | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
GTP_EFTU_D2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PharmGKB | PA134971637 | PharmGKB |
PRINTS | ELONGATNFCT | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PROSITE | G_TR_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
G_TR_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMART | EFG_C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
EFG_IV | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF50447 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SSF52540 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SSF54211 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SSF54980 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | A0A0S2Z5W5_HUMAN | UniProtKB/TrEMBL |
A6NCI9 | ENTREZGENE | |
B2RCB9 | ENTREZGENE | |
B3KRW1 | ENTREZGENE | |
C9IZ01 | ENTREZGENE, UniProtKB/TrEMBL | |
C9JA25_HUMAN | UniProtKB/TrEMBL | |
E5KND5 | ENTREZGENE, UniProtKB/TrEMBL | |
E5KND7 | ENTREZGENE, UniProtKB/TrEMBL | |
EFGM_HUMAN | UniProtKB/Swiss-Prot | |
F8WAU4_HUMAN | UniProtKB/TrEMBL | |
H7C5M4_HUMAN | UniProtKB/TrEMBL | |
Q6GTN2 | ENTREZGENE | |
Q96RP9 | ENTREZGENE | |
Q96T39 | ENTREZGENE | |
UniProt Secondary | A6NCI9 | UniProtKB/Swiss-Prot |
B2RCB9 | UniProtKB/Swiss-Prot | |
B3KRW1 | UniProtKB/Swiss-Prot | |
Q6GTN2 | UniProtKB/Swiss-Prot | |
Q96T39 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2016-07-19 | GFM1 | G elongation factor mitochondrial 1 | GFM1 | G elongation factor, mitochondrial 1 | Symbol and/or name change | 5135510 | APPROVED |