PRR15 (proline rich 15) - Rat Genome Database

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Gene: PRR15 (proline rich 15) Homo sapiens
Analyze
Symbol: PRR15
Name: proline rich 15
RGD ID: 1603877
HGNC Page HGNC:22310
Description: ASSOCIATED WITH genetic disease; Pleomorphic xanthoastrocytoma; pleomorphic xanthoastrocytoma; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; belinostat
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: proline-rich protein 15
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38729,563,835 - 29,567,295 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl729,563,835 - 29,567,293 (+)EnsemblGRCh38hg38GRCh38
GRCh37729,603,451 - 29,606,911 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36729,569,952 - 29,573,436 (+)NCBINCBI36Build 36hg18NCBI36
Celera729,592,943 - 29,596,427 (+)NCBICelera
Cytogenetic Map7p14.3NCBI
HuRef729,485,121 - 29,488,605 (+)NCBIHuRef
CHM1_1729,603,479 - 29,606,963 (+)NCBICHM1_1
T2T-CHM13v2.0729,701,617 - 29,705,075 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2729,653,603 - 29,657,087 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:12690205   PMID:15489334   PMID:17207965   PMID:19605793   PMID:21061267   PMID:21832049   PMID:23940030   PMID:28380025   PMID:32814053   PMID:33961781   PMID:35944360  
PMID:37072408  


Genomics

Comparative Map Data
PRR15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38729,563,835 - 29,567,295 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl729,563,835 - 29,567,293 (+)EnsemblGRCh38hg38GRCh38
GRCh37729,603,451 - 29,606,911 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36729,569,952 - 29,573,436 (+)NCBINCBI36Build 36hg18NCBI36
Celera729,592,943 - 29,596,427 (+)NCBICelera
Cytogenetic Map7p14.3NCBI
HuRef729,485,121 - 29,488,605 (+)NCBIHuRef
CHM1_1729,603,479 - 29,606,963 (+)NCBICHM1_1
T2T-CHM13v2.0729,701,617 - 29,705,075 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2729,653,603 - 29,657,087 (+)NCBI
Prr15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39654,290,442 - 54,320,421 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl654,302,820 - 54,307,186 (+)EnsemblGRCm39 Ensembl
GRCm38654,326,756 - 54,343,436 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl654,325,835 - 54,330,201 (+)EnsemblGRCm38mm10GRCm38
MGSCv37654,277,006 - 54,280,194 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36654,256,590 - 54,259,778 (+)NCBIMGSCv36mm8
Celera654,858,766 - 54,861,960 (+)NCBICelera
Cytogenetic Map6B3NCBI
cM Map626.88NCBI
Prr15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8484,762,357 - 84,765,403 (+)NCBIGRCr8
mRatBN7.2483,432,002 - 83,435,582 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl483,431,758 - 83,437,436 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx488,653,346 - 88,656,393 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0484,428,767 - 84,431,814 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0482,851,364 - 82,854,411 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0484,478,839 - 84,481,885 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl484,478,839 - 84,481,883 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04149,139,370 - 149,142,581 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4482,704,274 - 82,707,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1482,989,925 - 82,991,867 (+)NCBI
Celera478,307,661 - 78,310,707 (+)NCBICelera
Cytogenetic Map4q24NCBI
Prr15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541031,012,612 - 31,016,035 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541031,012,402 - 31,016,035 (+)NCBIChiLan1.0ChiLan1.0
PRR15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2634,395,468 - 34,399,432 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1782,720,202 - 82,723,664 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0730,206,558 - 30,210,422 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1729,800,384 - 29,803,846 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl729,802,905 - 29,803,294 (+)Ensemblpanpan1.1panPan2
PRR15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11442,533,591 - 42,537,077 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1442,536,093 - 42,536,482 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1441,966,571 - 41,971,018 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01442,474,121 - 42,478,575 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1442,477,009 - 42,477,398 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11442,591,819 - 42,595,536 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01442,270,621 - 42,274,330 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01442,628,785 - 42,634,305 (+)NCBIUU_Cfam_GSD_1.0
Prr15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511886,795,775 - 86,799,469 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364786,007,775 - 6,010,688 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364786,007,729 - 6,011,225 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRR15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1843,181,290 - 43,184,555 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11843,181,283 - 43,184,932 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21847,566,199 - 47,570,561 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PRR15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12128,802,784 - 28,806,279 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2128,803,359 - 28,803,748 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604275,946,458 - 75,950,992 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prr15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247391,114,777 - 1,120,875 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247391,118,686 - 1,122,239 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PRR15
9 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 7p22.3-14.1(chr7:54185-41875885)x3 copy number gain See cases [RCV000051159] Chr7:54185..41875885 [GRCh38]
Chr7:54185..41915483 [GRCh37]
Chr7:149268..41882008 [NCBI36]
Chr7:7p22.3-14.1		 pathogenic
GRCh38/hg38 7p15.2-14.3(chr7:25511691-30421133)x1 copy number loss See cases [RCV000052310] Chr7:25511691..30421133 [GRCh38]
Chr7:25551310..30460749 [GRCh37]
Chr7:25517835..30427274 [NCBI36]
Chr7:7p15.2-14.3		 pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:53985-159282531)x1 copy number loss See cases [RCV000052250] Chr7:53985..159282531 [GRCh38]
Chr7:53985..159075220 [GRCh37]
Chr7:149068..158767981 [NCBI36]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7p14.3(chr7:29368207-29796236)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052655]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052655]|See cases [RCV000052655] Chr7:29368207..29796236 [GRCh38]
Chr7:29407823..29835852 [GRCh37]
Chr7:29374348..29802377 [NCBI36]
Chr7:7p14.3		 uncertain significance
GRCh38/hg38 7p22.3-14.2(chr7:54185-37089712)x3 copy number gain See cases [RCV000053530] Chr7:54185..37089712 [GRCh38]
Chr7:54185..37129317 [GRCh37]
Chr7:149268..37095842 [NCBI36]
Chr7:7p22.3-14.2		 pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:54185-159282390)x1 copy number loss See cases [RCV000135401] Chr7:54185..159282390 [GRCh38]
Chr7:54185..159075079 [GRCh37]
Chr7:149268..158767840 [NCBI36]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7p21.1-14.3(chr7:20561456-32005143)x1 copy number loss See cases [RCV000136775] Chr7:20561456..32005143 [GRCh38]
Chr7:20601079..32044755 [GRCh37]
Chr7:20567604..32011280 [NCBI36]
Chr7:7p21.1-14.3		 pathogenic
GRCh38/hg38 7p14.3(chr7:29030620-29796236)x1 copy number loss See cases [RCV000141239] Chr7:29030620..29796236 [GRCh38]
Chr7:29070236..29835852 [GRCh37]
Chr7:29036761..29802377 [NCBI36]
Chr7:7p14.3		 uncertain significance
GRCh37/hg19 7p15.3-14.3(chr7:22935369-32621975)x1 copy number loss See cases [RCV000240125] Chr7:22935369..32621975 [GRCh37]
Chr7:7p15.3-14.3		 pathogenic
TMEM106B-BRAF fusion deletion Pleomorphic xanthoastrocytoma [RCV000454357] Chr7:12258147..140494267 [GRCh37]
Chr7:7p21.3-q34		 pathogenic
GRCh37/hg19 7p21.3-14.2(chr7:11562624-36395416)x3 copy number gain See cases [RCV000446478] Chr7:11562624..36395416 [GRCh37]
Chr7:7p21.3-14.2		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43360-159119707)x1 copy number loss See cases [RCV000446044] Chr7:43360..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7p21.3-12.1(chr7:11048840-52863626)x3 copy number gain See cases [RCV000512091] Chr7:11048840..52863626 [GRCh37]
Chr7:7p21.3-12.1		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707) copy number gain See cases [RCV000510686] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707)x3 copy number gain See cases [RCV000511549] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
NM_175887.3(PRR15):c.7G>A (p.Asp3Asn) single nucleotide variant Inborn genetic diseases [RCV003270583] Chr7:29566336 [GRCh38]
Chr7:29605952 [GRCh37]
Chr7:7p14.3		 uncertain significance
NC_000007.13:g.(20954043_21001537)_(114528369_114556605)inv inversion Childhood apraxia of speech [RCV000234948] Chr7:21001537..114528369 [GRCh37]
Chr7:7p15.3-q31.1		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:10704-159122532)x3 copy number gain not provided [RCV000746278] Chr7:10704..159122532 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:44935-159126310)x3 copy number gain not provided [RCV000746280] Chr7:44935..159126310 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:10365-159119707)x3 copy number gain not provided [RCV000848126] Chr7:10365..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
Single allele complex Ring chromosome 7 [RCV002280646] Chr7:43360..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7p15.3-14.3(chr7:23877135-33139446)x1 copy number loss not provided [RCV001005924] Chr7:23877135..33139446 [GRCh37]
Chr7:7p15.3-14.3		 pathogenic
NC_000007.13:g.23236782_30690453del7453672 deletion Silver Russell Syndrome-related disorder [RCV000785664] Chr7:23236782..30690453 [GRCh37]
Chr7:7p15.3-14.3		 pathogenic
GRCh37/hg19 7p15.1-14.3(chr7:28487175-32037495)x3 copy number gain not provided [RCV001005926] Chr7:28487175..32037495 [GRCh37]
Chr7:7p15.1-14.3		 likely pathogenic
GRCh37/hg19 7p21.3-14.2(chr7:10745750-35305167) copy number gain not specified [RCV002053668] Chr7:10745750..35305167 [GRCh37]
Chr7:7p21.3-14.2		 likely pathogenic
GRCh37/hg19 7p15.2-14.1(chr7:27507832-39072473) copy number gain not specified [RCV002053677] Chr7:27507832..39072473 [GRCh37]
Chr7:7p15.2-14.1		 likely pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:56604613-96692931)x1 copy number loss See cases [RCV002287832] Chr7:56604613..96692931 [GRCh37]
Chr7:7p22.3-q36.3		 uncertain significance
GRCh37/hg19 7p15.3-14.3(chr7:25451740-33864069) copy number loss Cyclical vomiting syndrome [RCV002280775] Chr7:25451740..33864069 [GRCh37]
Chr7:7p15.3-14.3		 pathogenic
NM_175887.3(PRR15):c.313G>C (p.Ala105Pro) single nucleotide variant Inborn genetic diseases [RCV003262854] Chr7:29566642 [GRCh38]
Chr7:29606258 [GRCh37]
Chr7:7p14.3		 uncertain significance
GRCh37/hg19 7p15.2-14.3(chr7:27133786-34466477)x1 copy number loss not provided [RCV002475752] Chr7:27133786..34466477 [GRCh37]
Chr7:7p15.2-14.3		 pathogenic
NM_175887.3(PRR15):c.113C>A (p.Ala38Asp) single nucleotide variant Inborn genetic diseases [RCV002783280] Chr7:29566442 [GRCh38]
Chr7:29606058 [GRCh37]
Chr7:7p14.3		 uncertain significance
NM_175887.3(PRR15):c.375C>G (p.His125Gln) single nucleotide variant Inborn genetic diseases [RCV002826599] Chr7:29566704 [GRCh38]
Chr7:29606320 [GRCh37]
Chr7:7p14.3		 likely benign
NM_175887.3(PRR15):c.89G>A (p.Gly30Glu) single nucleotide variant Inborn genetic diseases [RCV002673583] Chr7:29566418 [GRCh38]
Chr7:29606034 [GRCh37]
Chr7:7p14.3		 uncertain significance
NM_175887.3(PRR15):c.286C>T (p.Arg96Cys) single nucleotide variant Inborn genetic diseases [RCV003193794] Chr7:29566615 [GRCh38]
Chr7:29606231 [GRCh37]
Chr7:7p14.3		 uncertain significance
NM_175887.3(PRR15):c.91G>T (p.Val31Leu) single nucleotide variant Inborn genetic diseases [RCV003283771] Chr7:29566420 [GRCh38]
Chr7:29606036 [GRCh37]
Chr7:7p14.3		 uncertain significance
NM_175887.3(PRR15):c.196G>C (p.Gly66Arg) single nucleotide variant Inborn genetic diseases [RCV003351158] Chr7:29566525 [GRCh38]
Chr7:29606141 [GRCh37]
Chr7:7p14.3		 uncertain significance
NM_175887.3(PRR15):c.215C>G (p.Pro72Arg) single nucleotide variant Inborn genetic diseases [RCV003349517] Chr7:29566544 [GRCh38]
Chr7:29606160 [GRCh37]
Chr7:7p14.3		 uncertain significance
GRCh37/hg19 7p14.3(chr7:28940557-31806164)x3 copy number gain not specified [RCV003986729] Chr7:28940557..31806164 [GRCh37]
Chr7:7p14.3		 uncertain significance
GRCh37/hg19 7p21.1-14.3(chr7:17736012-30663423)x1 copy number loss not specified [RCV003986712] Chr7:17736012..30663423 [GRCh37]
Chr7:7p21.1-14.3		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:693
Count of miRNA genes:540
Interacting mature miRNAs:591
Transcripts:ENST00000319694, ENST00000450427
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH92381  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37729,606,673 - 29,606,809UniSTSGRCh37
Build 36729,573,198 - 29,573,334RGDNCBI36
Celera729,596,189 - 29,596,325RGD
Cytogenetic Map7p14.3UniSTS
HuRef729,488,367 - 29,488,503UniSTS
CRA_TCAGchr7v2729,656,849 - 29,656,985UniSTS
GeneMap99-GB4 RH Map7135.71UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 747 15 54 75 147 18 154 3 10 164 309 190 64 170 2
Low 770 1556 1234 203 196 109 2344 243 1353 198 1005 1267 100 866 1517 3
Below cutoff 900 1128 355 271 811 265 1688 1763 2279 39 135 130 8 1 166 1147

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000319694   ⟹   ENSP00000317836
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl729,563,835 - 29,567,293 (+)Ensembl
RefSeq Acc Id: ENST00000450427   ⟹   ENSP00000408158
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl729,565,450 - 29,566,383 (+)Ensembl
RefSeq Acc Id: NM_001329996   ⟹   NP_001316925
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38729,563,835 - 29,567,293 (+)NCBI
T2T-CHM13v2.0729,701,617 - 29,705,073 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001329997   ⟹   NP_001316926
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38729,565,533 - 29,567,295 (+)NCBI
T2T-CHM13v2.0729,703,314 - 29,705,075 (+)NCBI
Sequence:
RefSeq Acc Id: NM_175887   ⟹   NP_787083
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38729,563,835 - 29,567,293 (+)NCBI
GRCh37729,603,039 - 29,606,911 (+)NCBI
Build 36729,569,952 - 29,573,436 (+)NCBI Archive
Celera729,592,943 - 29,596,427 (+)RGD
HuRef729,485,121 - 29,488,605 (+)RGD
CHM1_1729,603,479 - 29,606,963 (+)NCBI
T2T-CHM13v2.0729,701,617 - 29,705,073 (+)NCBI
CRA_TCAGchr7v2729,653,603 - 29,657,087 (+)ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011515198   ⟹   XP_011513500
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38729,565,533 - 29,567,293 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011515199   ⟹   XP_011513501
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38729,563,835 - 29,567,295 (+)NCBI
Sequence:
RefSeq Acc Id: XM_054357568   ⟹   XP_054213543
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0729,703,314 - 29,705,073 (+)NCBI
RefSeq Acc Id: XM_054357569   ⟹   XP_054213544
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0729,702,159 - 29,705,075 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_787083   ⟸   NM_175887
- UniProtKB: Q8IV56 (UniProtKB/Swiss-Prot),   A4D1A1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011513500   ⟸   XM_011515198
- Peptide Label: isoform X1
- UniProtKB: Q8IV56 (UniProtKB/Swiss-Prot),   A4D1A1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011513501   ⟸   XM_011515199
- Peptide Label: isoform X1
- UniProtKB: Q8IV56 (UniProtKB/Swiss-Prot),   A4D1A1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001316925   ⟸   NM_001329996
- UniProtKB: Q8IV56 (UniProtKB/Swiss-Prot),   A4D1A1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001316926   ⟸   NM_001329997
- UniProtKB: Q8IV56 (UniProtKB/Swiss-Prot),   A4D1A1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000408158   ⟸   ENST00000450427
RefSeq Acc Id: ENSP00000317836   ⟸   ENST00000319694
RefSeq Acc Id: XP_054213544   ⟸   XM_054357569
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054213543   ⟸   XM_054357568
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8IV56-F1-model_v2 AlphaFold Q8IV56 1-129 view protein structure

Promoters
RGD ID:7210255
Promoter ID:EPDNEW_H10874
Type:initiation region
Name:PRR15_1
Description:proline rich 15
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38729,563,885 - 29,563,945EPDNEW
RGD ID:6806346
Promoter ID:HG_KWN:56772
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:NM_175887,   OTTHUMT00000327680,   UC003TAB.2
Position:
Human AssemblyChrPosition (strand)Source
Build 36729,569,376 - 29,569,876 (-)MPROMDB
RGD ID:6806062
Promoter ID:HG_KWN:56773
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   NB4
Transcripts:OTTHUMT00000327614
Position:
Human AssemblyChrPosition (strand)Source
Build 36729,570,601 - 29,571,102 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:22310 AgrOrtholog
COSMIC PRR15 COSMIC
Ensembl Genes ENSG00000176532 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000319694 ENTREZGENE
  ENST00000319694.3 UniProtKB/Swiss-Prot
  ENST00000450427.1 UniProtKB/TrEMBL
GTEx ENSG00000176532 GTEx
HGNC ID HGNC:22310 ENTREZGENE
Human Proteome Map PRR15 Human Proteome Map
InterPro PRR15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:222171 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 222171 ENTREZGENE
OMIM 618344 OMIM
PANTHER PROLINE-RICH PROTEIN 15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR14581 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ATAD4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA162400154 PharmGKB
UniProt A4D1A1 ENTREZGENE, UniProtKB/TrEMBL
  C9JQ22_HUMAN UniProtKB/TrEMBL
  PRR15_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE