PRR15 (proline rich 15) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: PRR15 (proline rich 15) Pan paniscus
Analyze
Symbol: PRR15
Name: proline rich 15
RGD ID: 11741334
Description: ASSOCIATED WITH genetic disease (ortholog); pleomorphic xanthoastrocytoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: proline-rich protein 15
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2634,395,468 - 34,399,432 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1782,720,202 - 82,723,664 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0730,206,558 - 30,210,422 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1729,800,384 - 29,803,846 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl729,802,905 - 29,803,294 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
PRR15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2634,395,468 - 34,399,432 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1782,720,202 - 82,723,664 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0730,206,558 - 30,210,422 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1729,800,384 - 29,803,846 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl729,802,905 - 29,803,294 (+)Ensemblpanpan1.1panPan2
PRR15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38729,563,835 - 29,567,295 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl729,563,835 - 29,567,293 (+)EnsemblGRCh38hg38GRCh38
GRCh37729,603,451 - 29,606,911 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36729,569,952 - 29,573,436 (+)NCBINCBI36Build 36hg18NCBI36
Celera729,592,943 - 29,596,427 (+)NCBICelera
Cytogenetic Map7p14.3NCBI
HuRef729,485,121 - 29,488,605 (+)NCBIHuRef
CHM1_1729,603,479 - 29,606,963 (+)NCBICHM1_1
T2T-CHM13v2.0729,701,617 - 29,705,075 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2729,653,603 - 29,657,087 (+)NCBI
Prr15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39654,290,442 - 54,320,421 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl654,302,820 - 54,307,186 (+)EnsemblGRCm39 Ensembl
GRCm38654,326,756 - 54,343,436 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl654,325,835 - 54,330,201 (+)EnsemblGRCm38mm10GRCm38
MGSCv37654,277,006 - 54,280,194 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36654,256,590 - 54,259,778 (+)NCBIMGSCv36mm8
Celera654,858,766 - 54,861,960 (+)NCBICelera
Cytogenetic Map6B3NCBI
cM Map626.88NCBI
Prr15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8484,762,357 - 84,765,403 (+)NCBIGRCr8
mRatBN7.2483,432,002 - 83,435,582 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl483,431,758 - 83,437,436 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx488,653,346 - 88,656,393 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0484,428,767 - 84,431,814 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0482,851,364 - 82,854,411 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0484,478,839 - 84,481,885 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl484,478,839 - 84,481,883 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04149,139,370 - 149,142,581 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4482,704,274 - 82,707,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1482,989,925 - 82,991,867 (+)NCBI
Celera478,307,661 - 78,310,707 (+)NCBICelera
Cytogenetic Map4q24NCBI
Prr15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541031,012,612 - 31,016,035 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541031,012,402 - 31,016,035 (+)NCBIChiLan1.0ChiLan1.0
PRR15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11442,533,591 - 42,537,077 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1442,536,093 - 42,536,482 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1441,966,571 - 41,971,018 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01442,474,121 - 42,478,575 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1442,477,009 - 42,477,398 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11442,591,819 - 42,595,536 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01442,270,621 - 42,274,330 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01442,628,785 - 42,634,305 (+)NCBIUU_Cfam_GSD_1.0
Prr15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511886,795,775 - 86,799,469 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364786,007,775 - 6,010,688 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364786,007,729 - 6,011,225 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRR15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1843,181,290 - 43,184,555 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11843,181,283 - 43,184,932 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21847,566,199 - 47,570,561 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PRR15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12128,802,784 - 28,806,279 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2128,803,359 - 28,803,748 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604275,946,458 - 75,950,992 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prr15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247391,114,777 - 1,120,875 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247391,118,686 - 1,122,239 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000002179   ⟹   ENSPPAP00000000499
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl729,802,905 - 29,803,294 (+)Ensembl
RefSeq Acc Id: XM_003807884   ⟹   XP_003807932
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2634,395,486 - 34,399,432 (+)NCBI
NHGRI_mPanPan1782,720,202 - 82,723,664 (+)NCBI
Mhudiblu_PPA_v0730,206,558 - 30,210,422 (+)NCBI
PanPan1.1729,800,384 - 29,803,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008960010   ⟹   XP_008958258
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2634,395,468 - 34,399,432 (+)NCBI
NHGRI_mPanPan1782,720,202 - 82,723,664 (+)NCBI
Mhudiblu_PPA_v0730,206,558 - 30,210,422 (+)NCBI
PanPan1.1729,801,420 - 29,803,846 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003807932 (Get FASTA)   NCBI Sequence Viewer  
  XP_008958258 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000000499.1
RefSeq Acc Id: XP_003807932   ⟸   XM_003807884
- UniProtKB: A0A2R8Z6T0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008958258   ⟸   XM_008960010
- UniProtKB: A0A2R8Z6T0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000000499   ⟸   ENSPPAT00000002179


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000002015 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000002179.1 UniProtKB/TrEMBL
InterPro PRR15 UniProtKB/TrEMBL
KEGG Report pps:100970357 UniProtKB/TrEMBL
NCBI Gene PRR15 ENTREZGENE
PANTHER PROLINE-RICH PROTEIN 15 UniProtKB/TrEMBL
  PTHR14581 UniProtKB/TrEMBL
Pfam ATAD4 UniProtKB/TrEMBL
UniProt A0A2R8Z6T0 ENTREZGENE, UniProtKB/TrEMBL