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Gene: HEPACAM2 (HEPACAM family member 2) Homo sapiens

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Symbol:

HEPACAM2

Name:

HEPACAM family member 2

RGD ID:

1602173

HGNC Page

HGNC:27364

Description:

Involved in centrosome cycle. Located in several cellular components, including Golgi apparatus; microtubule cytoskeleton; and midbody.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

MIKI; mitotic kinetics regulator

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Hepacam2 (HEPACAM family member 2)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Hepacam2 (HEPACAM family member 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, PhylomeDB, Treefam
Chinchilla lanigera (long-tailed chinchilla):	Hepacam2 (HEPACAM family member 2)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	HEPACAM2 (HEPACAM family member 2)	NCBI	Ortholog
Canis lupus familiaris (dog):	HEPACAM2 (HEPACAM family member 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Hepacam2 (HEPACAM family member 2)	NCBI	Ortholog
Sus scrofa (pig):	HEPACAM2 (HEPACAM family member 2)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Chlorocebus sabaeus (green monkey):	HEPACAM2 (HEPACAM family member 2)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Hepacam2 (HEPACAM family member 2)	NCBI	Ortholog
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Hepacam2 (HEPACAM family member 2)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Hepacam2 (HEPACAM family member 2)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	hepacam2 (HEPACAM family member 2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Xenopus tropicalis (tropical clawed frog):	hepacam2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus laevis (African clawed frog):	hepacam2.L	Alliance	DIOPT (Xenbase)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	93,188,534 - 93,232,285 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	93,188,534 - 93,226,469 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	92,817,847 - 92,861,511 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	92,655,835 - 92,693,718 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	87,522,416 - 87,560,293 (-)	NCBI		Celera
Cytogenetic Map	7	q21.2	NCBI
HuRef	7	87,426,711 - 87,464,583 (-)	NCBI		HuRef
CHM1_1	7	92,747,951 - 92,785,828 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	94,430,593 - 94,474,339 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	92,147,226 - 92,185,103 (-)	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HEPACAM2	Human	pleomorphic xanthoastrocytoma		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Pleomorphic xanthoastrocytoma	ClinVar	PMID:28299358
HEPACAM2	Human	prostate cancer		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Malignant tumor of prostate	ClinVar

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HEPACAM2	Human	1,1-dichloroethene	decreases expression	ISO	Hepacam2 (Mus musculus)	6480464	vinylidene chloride results in decreased expression of HEPACAM2 mRNA	CTD	PMID:26682919
HEPACAM2	Human	1,2-dimethylhydrazine	decreases expression	ISO	Hepacam2 (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in decreased expression of HEPACAM2 mRNA	CTD	PMID:22206623
HEPACAM2	Human	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Hepacam2 (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in increased expression of HEPACAM2 mRNA	CTD	PMID:32109520
HEPACAM2	Human	2,3,7,8-Tetrachlorodibenzofuran	increases expression	ISO	Hepacam2 (Rattus norvegicus)	6480464	2 more ...	CTD	PMID:32109520
HEPACAM2	Human	2,4-dibromophenyl 2,4,5-tribromophenyl ether	affects expression	ISO	Hepacam2 (Mus musculus)	6480464	2 more ...	CTD	PMID:38648751
HEPACAM2	Human	aflatoxin B1	decreases methylation	EXP		6480464	Aflatoxin B1 results in decreased methylation of HEPACAM2 gene	CTD	PMID:27153756
HEPACAM2	Human	aflatoxin M1	decreases expression	EXP		6480464	Aflatoxin M1 results in decreased expression of HEPACAM2 mRNA	CTD	PMID:30928695
HEPACAM2	Human	antirheumatic drug	increases expression	EXP		6480464	Antirheumatic Agents results in increased expression of HEPACAM2 mRNA	CTD	PMID:24449571
HEPACAM2	Human	benzo[a]pyrene	increases methylation	EXP		6480464	Benzo(a)pyrene results in increased methylation of HEPACAM2 3' UTR and Benzo(a)pyrene results in increased methylation of HEPACAM2 exon	CTD	PMID:27901495
HEPACAM2	Human	benzo[a]pyrene	affects methylation	EXP		6480464	Benzo(a)pyrene affects the methylation of HEPACAM2 promoter	CTD	PMID:27901495
HEPACAM2	Human	bisphenol A	decreases expression	ISO	Hepacam2 (Rattus norvegicus)	6480464	bisphenol A results in decreased expression of HEPACAM2 mRNA	CTD	PMID:25181051
HEPACAM2	Human	bisphenol A	increases expression	ISO	Hepacam2 (Mus musculus)	6480464	bisphenol A results in increased expression of HEPACAM2 mRNA	CTD	PMID:32156529
HEPACAM2	Human	bisphenol A	multiple interactions	EXP		6480464	[bisphenol A co-treated with Fulvestrant] results in decreased methylation of HEPACAM2 gene	CTD	PMID:31601247
HEPACAM2	Human	bisphenol A	decreases methylation	EXP		6480464	bisphenol A results in decreased methylation of HEPACAM2 gene	CTD	PMID:31601247
HEPACAM2	Human	bisphenol A	increases methylation	ISO	Hepacam2 (Rattus norvegicus)	6480464	bisphenol A results in increased methylation of HEPACAM2 gene	CTD	PMID:28505145
HEPACAM2	Human	bisphenol F	decreases methylation	EXP		6480464	bisphenol F results in decreased methylation of HEPACAM2 gene	CTD	PMID:31601247
HEPACAM2	Human	buta-1,3-diene	decreases expression	ISO	Hepacam2 (Mus musculus)	6480464	1 and 3-butadiene results in decreased expression of HEPACAM2 mRNA	CTD	PMID:29038090
HEPACAM2	Human	carbon nanotube	decreases expression	ISO	Hepacam2 (Mus musculus)	6480464	Nanotubes more ...	CTD	PMID:25554681
HEPACAM2	Human	cefaloridine	increases expression	ISO	Hepacam2 (Rattus norvegicus)	6480464	Cephaloridine results in increased expression of HEPACAM2 mRNA	CTD	PMID:18500788
HEPACAM2	Human	copper atom	increases expression	ISO	Hepacam2 (Rattus norvegicus)	6480464	Copper deficiency results in increased expression of HEPACAM2 mRNA	CTD	PMID:26033743
HEPACAM2	Human	copper(0)	increases expression	ISO	Hepacam2 (Rattus norvegicus)	6480464	Copper deficiency results in increased expression of HEPACAM2 mRNA	CTD	PMID:26033743
HEPACAM2	Human	diethyl phthalate	decreases expression	ISO	Hepacam2 (Rattus norvegicus)	6480464	diethyl phthalate results in decreased expression of HEPACAM2 mRNA	CTD	PMID:32341500
HEPACAM2	Human	dioxygen	multiple interactions	ISO	Hepacam2 (Mus musculus)	6480464	[NFE2L2 protein affects the susceptibility to Oxygen] which affects the expression of HEPACAM2 mRNA	CTD	PMID:30529165
HEPACAM2	Human	fonofos	decreases methylation	EXP		6480464	Fonofos results in decreased methylation of HEPACAM2 promoter	CTD	PMID:22847954
HEPACAM2	Human	fulvestrant	multiple interactions	EXP		6480464	[bisphenol A co-treated with Fulvestrant] results in decreased methylation of HEPACAM2 gene	CTD	PMID:31601247
HEPACAM2	Human	furan	increases expression	ISO	Hepacam2 (Rattus norvegicus)	6480464	furan results in increased expression of HEPACAM2 mRNA	CTD	PMID:27387713
HEPACAM2	Human	lead diacetate	increases expression	ISO	Hepacam2 (Mus musculus)	6480464	lead acetate results in increased expression of HEPACAM2 mRNA	CTD	PMID:22609695
HEPACAM2	Human	lipopolysaccharide	multiple interactions	EXP		6480464	[S-(1 more ...	CTD	PMID:35811015
HEPACAM2	Human	ozone	multiple interactions	ISO	Hepacam2 (Mus musculus)	6480464	[Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in decreased expression of HEPACAM2 mRNA and [Air Pollutants results in increased abundance of Ozone] which results in decreased expression of HEPACAM2 mRNA	CTD	PMID:34911549
HEPACAM2	Human	ozone	decreases expression	ISO	Hepacam2 (Mus musculus)	6480464	Ozone results in decreased expression of HEPACAM2 mRNA	CTD	PMID:33026818
HEPACAM2	Human	parathion	decreases methylation	EXP		6480464	Parathion results in decreased methylation of HEPACAM2 promoter	CTD	PMID:22847954
HEPACAM2	Human	perfluorooctane-1-sulfonic acid	increases expression	EXP		6480464	perfluorooctane sulfonic acid results in increased expression of HEPACAM2 mRNA	CTD	PMID:25812627
HEPACAM2	Human	perfluorooctanoic acid	increases expression	EXP		6480464	perfluorooctanoic acid results in increased expression of HEPACAM2 mRNA	CTD	PMID:25812627
HEPACAM2	Human	S-(1,2-dichlorovinyl)-L-cysteine	multiple interactions	EXP		6480464	[S-(1 more ...	CTD	PMID:35811015
HEPACAM2	Human	S-(1,2-dichlorovinyl)-L-cysteine	increases expression	EXP		6480464	S-(1 and 2-dichlorovinyl)cysteine results in increased expression of HEPACAM2 mRNA	CTD	PMID:35811015
HEPACAM2	Human	silicon dioxide	decreases expression	ISO	Hepacam2 (Rattus norvegicus)	6480464	Silicon Dioxide results in decreased expression of HEPACAM2 mRNA	CTD	PMID:34779285
HEPACAM2	Human	sodium arsenite	increases expression	EXP		6480464	sodium arsenite results in increased expression of HEPACAM2 mRNA	CTD	PMID:38568856
HEPACAM2	Human	sulforaphane	decreases expression	ISO	Hepacam2 (Mus musculus)	6480464	sulforaphane results in decreased expression of HEPACAM2 mRNA	CTD	PMID:30529165
HEPACAM2	Human	terbufos	decreases methylation	EXP		6480464	terbufos results in decreased methylation of HEPACAM2 promoter	CTD	PMID:22847954
HEPACAM2	Human	titanium dioxide	increases expression	ISO	Hepacam2 (Rattus norvegicus)	6480464	titanium dioxide results in increased expression of HEPACAM2 mRNA	CTD	PMID:28181387
HEPACAM2	Human	titanium dioxide	increases expression	ISO	Hepacam2 (Mus musculus)	6480464	titanium dioxide results in increased expression of HEPACAM2 mRNA	CTD	PMID:35295148
HEPACAM2	Human	trimellitic anhydride	decreases expression	ISO	Hepacam2 (Mus musculus)	6480464	trimellitic anhydride results in decreased expression of HEPACAM2 mRNA	CTD	PMID:19042947
HEPACAM2	Human	triptonide	increases expression	ISO	Hepacam2 (Mus musculus)	6480464	triptonide results in increased expression of HEPACAM2 mRNA	CTD	PMID:33045310
HEPACAM2	Human	valproic acid	decreases methylation	EXP		6480464	Valproic Acid results in decreased methylation of HEPACAM2 gene	CTD	PMID:29154799

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HEPACAM2	Human	cell division	involved_in	IEA	UniProtKB-KW:KW-0132	150520179		UniProt	GO_REF:0000043
HEPACAM2	Human	centrosome cycle	involved_in	IMP		150520179	PMID:22864114	UniProt	PMID:22864114
HEPACAM2	Human	centrosome cycle	involved_in	IBA	PANTHER:PTN008689748 and UniProtKB:A8MVW5	150520179		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HEPACAM2	Human	centrosome	located_in	IEA	UniProtKB-SubCell:SL-0048	150520179		UniProt	GO_REF:0000044
HEPACAM2	Human	centrosome	is_active_in	IBA	PANTHER:PTN008689748 and UniProtKB:A8MVW5	150520179		GO_Central	GO_REF:0000033
HEPACAM2	Human	centrosome	located_in	IDA		150520179	PMID:22864114	UniProt	PMID:22864114
HEPACAM2	Human	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044
HEPACAM2	Human	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
HEPACAM2	Human	cytoskeleton	located_in	IEA	UniProtKB-KW:KW-0206	150520179		UniProt	GO_REF:0000043
HEPACAM2	Human	endomembrane system	located_in	IEA	UniProtKB-SubCell:SL-0147	150520179		UniProt	GO_REF:0000044
HEPACAM2	Human	Golgi apparatus	located_in	IDA		150520179	PMID:22864114	UniProt	PMID:22864114
HEPACAM2	Human	Golgi apparatus	is_active_in	IBA	PANTHER:PTN008689748 and UniProtKB:A8MVW5	150520179		GO_Central	GO_REF:0000033
HEPACAM2	Human	Golgi apparatus	located_in	IEA	UniProtKB-KW:KW-0333	150520179		UniProt	GO_REF:0000043
HEPACAM2	Human	Golgi membrane	located_in	IEA	UniProtKB-SubCell:SL-0134	150520179		UniProt	GO_REF:0000044
HEPACAM2	Human	intracellular membrane-bounded organelle	located_in	IDA		150520179		HPA	GO_REF:0000052
HEPACAM2	Human	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
HEPACAM2	Human	midbody	located_in	IEA	UniProtKB-SubCell:SL-0469	150520179		UniProt	GO_REF:0000044
HEPACAM2	Human	midbody	is_active_in	IBA	PANTHER:PTN008689748 and UniProtKB:A8MVW5	150520179		GO_Central	GO_REF:0000033
HEPACAM2	Human	midbody	located_in	IDA		150520179	PMID:22864114	UniProt	PMID:22864114
HEPACAM2	Human	mitotic spindle	located_in	IDA		150520179		HPA	GO_REF:0000052
HEPACAM2	Human	nucleoplasm	located_in	IDA		150520179		HPA	GO_REF:0000052
HEPACAM2	Human	spindle	located_in	IDA		150520179	PMID:22864114	UniProt	PMID:22864114
HEPACAM2	Human	spindle	is_active_in	IBA	PANTHER:PTN008689748 and UniProtKB:A8MVW5	150520179		GO_Central	GO_REF:0000033
HEPACAM2	Human	spindle	located_in	IEA	UniProtKB-SubCell:SL-0251	150520179		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HEPACAM2	Human	protein binding	enables	IPI	UniProtKB:O95271	150520179	PMID:22864114	UniProt	PMID:22864114

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HEPACAM2	Human	Pleomorphic xanthoastrocytoma		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Pleomorphic xanthoastrocytoma	ClinVar	PMID:28299358
HEPACAM2	Human	Prostate cancer		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Prostate cancer	ClinVar

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:12477932	PMID:12975309	PMID:14702039	PMID:16344560	PMID:19284880	PMID:19358830	PMID:20425829	PMID:21873635	PMID:22864114	PMID:25110502	PMID:26186194	PMID:28514442
PMID:33961781

HEPACAM2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	93,188,534 - 93,232,285 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	93,188,534 - 93,226,469 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	92,817,847 - 92,861,511 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	92,655,835 - 92,693,718 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	87,522,416 - 87,560,293 (-)	NCBI		Celera
Cytogenetic Map	7	q21.2	NCBI
HuRef	7	87,426,711 - 87,464,583 (-)	NCBI		HuRef
CHM1_1	7	92,747,951 - 92,785,828 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	94,430,593 - 94,474,339 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	92,147,226 - 92,185,103 (-)	NCBI

Hepacam2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	3,457,202 - 3,498,319 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	3,457,096 - 3,498,298 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	3,457,089 - 3,498,322 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	3,457,096 - 3,498,298 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	3,407,089 - 3,444,498 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	3,407,089 - 3,444,498 (-)	NCBI		MGSCv36	mm8
Celera	6	3,614,440 - 3,652,753 (-)	NCBI		Celera
Cytogenetic Map	6	A1	NCBI
cM Map	6	1.8	NCBI

Hepacam2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	32,400,523 - 32,435,936 (-)	NCBI		GRCr8
mRatBN7.2	4	31,446,195 - 31,480,859 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	31,446,169 - 31,480,953 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	36,418,895 - 36,453,532 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	32,345,009 - 32,379,640 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	30,702,637 - 30,737,653 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	28,402,862 - 28,437,722 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	28,403,125 - 28,437,676 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	28,306,417 - 28,340,959 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	28,266,853 - 28,301,151 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	28,280,224 - 28,314,967 (-)	NCBI
Celera	4	26,832,709 - 26,867,020 (-)	NCBI		Celera
Cytogenetic Map	4	q13	NCBI

Hepacam2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955432	10,086,698 - 10,128,238 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955432	10,088,162 - 10,128,169 (-)	NCBI	ChiLan1.0	ChiLan1.0

HEPACAM2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	111,032,485 - 111,076,452 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	159,297,128 - 159,341,095 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	85,145,026 - 85,183,278 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	98,739,782 - 98,777,713 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

HEPACAM2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	18,691,326 - 18,742,195 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	18,695,910 - 18,728,357 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	18,256,363 - 18,302,610 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	18,504,164 - 18,550,434 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	18,504,164 - 18,543,864 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	18,663,387 - 18,709,653 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	18,398,966 - 18,445,215 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	18,650,643 - 18,689,626 (-)	NCBI		UU_Cfam_GSD_1.0

Hepacam2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	32,106,315 - 32,148,426 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936803	656,770 - 693,499 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936803	663,950 - 693,530 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HEPACAM2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	73,020,281 - 73,067,520 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	73,020,279 - 73,074,872 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	79,735,226 - 79,743,982 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HEPACAM2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	55,788,028 - 55,829,876 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	55,788,084 - 55,824,890 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	48,476,241 - 48,518,452 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hepacam2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624813	13,512 - 53,004 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624813	13,552 - 52,913 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in HEPACAM2
40 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	909
Count of miRNA genes:	250
Interacting mature miRNAs:	281
Transcripts:	ENST00000341723, ENST00000394468, ENST00000440868, ENST00000453812, ENST00000492616
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
597063255	GWAS1159329_H	tonsillectomy risk measurement QTL GWAS1159329 (human)		0.000008	tonsillectomy risk measurement		7	93228572	93228574	Human

D7S623

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	92,833,530 - 92,833,776	UniSTS	GRCh37
Build 36	7	92,671,466 - 92,671,712	RGD	NCBI36
Celera	7	87,538,045 - 87,538,287	RGD
Cytogenetic Map	7	q21.3	UniSTS
HuRef	7	87,442,340 - 87,442,578	UniSTS
CRA_TCAGchr7v2	7	92,162,855 - 92,163,097	UniSTS
Marshfield Genetic Map	7	104.86	UniSTS
Marshfield Genetic Map	7	104.86	RGD
deCODE Assembly Map	7	103.48	UniSTS

RH103459

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	92,818,041 - 92,818,214	UniSTS	GRCh37
Build 36	7	92,655,977 - 92,656,150	RGD	NCBI36
Celera	7	87,522,558 - 87,522,731	RGD
Cytogenetic Map	7	q21.3	UniSTS
HuRef	7	87,426,853 - 87,427,026	UniSTS
CRA_TCAGchr7v2	7	92,147,368 - 92,147,541	UniSTS
GeneMap99-GB4 RH Map	7	490.31	UniSTS

G59810

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	92,836,192 - 92,836,393	UniSTS	GRCh37
Build 36	7	92,674,128 - 92,674,329	RGD	NCBI36
Celera	7	87,540,703 - 87,540,904	RGD
Cytogenetic Map	7	q21.3	UniSTS
HuRef	7	87,444,994 - 87,445,195	UniSTS
CRA_TCAGchr7v2	7	92,165,513 - 92,165,714	UniSTS
TNG Radiation Hybrid Map	7	40507.0	UniSTS
TNG Radiation Hybrid Map	7	40512.0	UniSTS

G33891

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	92,834,712 - 92,834,871	UniSTS	GRCh37
Build 36	7	92,672,648 - 92,672,807	RGD	NCBI36
Celera	7	87,539,223 - 87,539,382	RGD
Cytogenetic Map	7	q21.3	UniSTS
CRA_TCAGchr7v2	7	92,164,033 - 92,164,192	UniSTS

SHGC-23257

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	92,834,712 - 92,834,842	UniSTS	GRCh37
Build 36	7	92,672,648 - 92,672,778	RGD	NCBI36
Celera	7	87,539,223 - 87,539,353	RGD
Cytogenetic Map	7	q21.3	UniSTS
HuRef	7	87,443,514 - 87,443,644	UniSTS
CRA_TCAGchr7v2	7	92,164,033 - 92,164,163	UniSTS
TNG Radiation Hybrid Map	7	40502.0	UniSTS

RH36322

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	92,837,945 - 92,838,062	UniSTS	GRCh37
Build 36	7	92,675,881 - 92,675,998	RGD	NCBI36
Celera	7	87,542,456 - 87,542,573	RGD
Cytogenetic Map	7	q21.3	UniSTS
HuRef	7	87,446,747 - 87,446,864	UniSTS
CRA_TCAGchr7v2	7	92,167,266 - 92,167,383	UniSTS
GeneMap99-GB4 RH Map	7	490.31	UniSTS
NCBI RH Map	7	1043.8	UniSTS

D7S1762

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	7	92,836,192 - 92,836,395	UniSTS	GRCh37
Build 36	7	92,674,128 - 92,674,331	RGD	NCBI36
Celera	7	87,540,703 - 87,540,906	RGD
Cytogenetic Map	7	q21.3	UniSTS
HuRef	7	87,444,994 - 87,445,197	UniSTS
CRA_TCAGchr7v2	7	92,165,513 - 92,165,716	UniSTS
Whitehead-YAC Contig Map	7		UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
799	1928	1735	1084	4127	1143	1561	1	366	1477	207	1616	4636	4123	20	3268	1	678	1365	1097	163	1


RefSeq Transcripts	NG_051957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001039372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001288804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001288810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001346642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_198151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011516001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054357738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC000119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC002453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK096002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK298361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY358345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC046365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC136300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC136301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC139906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CD238020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH236949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DA426282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	H75859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KF458519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000341723 ⟹ ENSP00000340532

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	93,188,586 - 93,219,582 (-)	Ensembl

Ensembl Acc Id:

ENST00000394468 ⟹ ENSP00000377980

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	93,188,534 - 93,226,469 (-)	Ensembl

Ensembl Acc Id:

ENST00000440868 ⟹ ENSP00000389592

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	93,188,586 - 93,219,545 (-)	Ensembl

Ensembl Acc Id:

ENST00000453812 ⟹ ENSP00000390204

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	93,188,879 - 93,226,469 (-)	Ensembl

Ensembl Acc Id:

ENST00000492616

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	7	93,188,967 - 93,205,647 (-)	Ensembl

RefSeq Acc Id:

NM_001039372 ⟹ NP_001034461

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	93,188,534 - 93,226,469 (-)	NCBI
GRCh37	7	92,817,899 - 92,855,783 (-)	NCBI
Build 36	7	92,655,836 - 92,693,718 (-)	NCBI Archive
Celera	7	87,522,416 - 87,560,293 (-)	RGD
HuRef	7	87,426,711 - 87,464,633 (-)	NCBI
CHM1_1	7	92,747,951 - 92,785,878 (-)	NCBI
T2T-CHM13v2.0	7	94,430,593 - 94,468,523 (-)	NCBI
CRA_TCAGchr7v2	7	92,147,226 - 92,185,103 (-)	RGD

Sequence:

show sequence

ACTGAGAACAGGGCACTGCATGCATGGGACAGGATGCTTTCATGGAGCCCTTCGGTGACACACTTGGGGTCTTTCAGTGCAAAATATACCTCCTTCTCTTCGGTGCTTGCTCGGGGCTGAAGGTGACA
GTGCCATCACACACTGTCCATGGCGTCAGAGGTCAGGCCCTCTACCTACCCGTCCACTATGGCTTCCACACTCCAGCATCAGACATCCAGATCATATGGCTATTTGAGAGACCCCACACAATGCCCAA
ATACTTACTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTTGGAATACCAACACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGATGAAGGCAATTACA
TCGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCTGCCAGTCAGAAGATACAAGTCACGGTTGATGATCCTGTCACAAAGCCAGTGGTGCAGATTCATCCTCCCTCTGGGGCTGTGGAGTATGTG
GGGAACATGACCCTGACATGCCATGTGGAAGGGGGCACTCGGCTAGCTTACCAATGGCTAAAAAATGGGAGACCTGTCCACACCAGCTCCACCTACTCCTTTTCTCCCCAAAACAATACCCTTCATAT
TGCTCCAGTAACCAAGGAAGACATTGGGAATTACAGCTGCCTGGTGAGGAACCCTGTCAGTGAAATGGAAAGTGATATCATTATGCCCATCATATATTATGGACCTTATGGACTTCAAGTGAATTCTG
ATAAAGGGCTAAAAGTAGGGGAAGTGTTTACTGTTGACCTTGGAGAGGCCATCCTATTTGATTGTTCTGCTGATTCTCATCCCCCCAACACCTACTCCTGGATTAGGAGGACTGACAATACTACATAT
ATCATTAAGCATGGGCCTCGCTTAGAAGTTGCATCTGAGAAAGTAGCCCAGAAGACAATGGACTATGTGTGCTGTGCTTACAACAACATAACCGGCAGGCAAGATGAAACTCATTTCACAGTTATCAT
CACTTCCGTAGGACTGGAGAAGCTTGCACAGAAAGGAAAATCATTGTCACCTTTAGCAAGTATAACTGGAATATCACTATTTTTGATTATATCCATGTGTCTTCTCTTCCTATGGAAAAAATATCAAC
CCTACAAAGTTATAAAACAGAAACTAGAAGGCAGGCCAGAAACAGAATACAGGAAAGCTCAAACATTTTCAGGCCATGAAGATGCTCTGGATGACTTCGGAATATATGAATTTGTTGCTTTTCCAGAT
GTTTCTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAGCCTCTGATTGTGTATCGGGGCAAGATTTGCACAGTACAGTGTATGAAGTTATTCAGCACATCCCTGCCCAGCAGCAAGACCATCCAGA
GTGAACTTTCATGGGCTAAACAGTACATTCGAGTGAAATTCTGAAGAAACATTTTAAGGAAAAACAGTGGAAAAGTATATTAATCTGGAATCAGTGAAGAAACCAAGACCAACACCTCTTACTCATTA
TTCCTTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGC
TGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATAAGTTTTGTATGAAATATCTCTACAAACCTCAATTAGTTCTACTCTACACTTTCACTATCATCAACACTGAGACTATCCTGTCTCACCTACA
AATGTGGAAACTTTACATTGTTCGATTTTTCAGCAGACTTTGTTTTATTAAATTTTTATTAGTGTTAAGAATGCTAAATTTATGTTTCAATTTTATTTCCAAATTTCTATCTTGTTATTTGTACAACA
AAGTAATAAGGATGGTTGTCACAAAAACAAAACTATGCCTTCTCTTTTTTTTCAATCACCAGTAGTATTTTTGAGAAGACTTGTGAACACTTAAGGAAATGACTATTAAAGTCTTATTTTTATTTTTT
TCAAGGAAAGATGGATTCAAATAAATTATTCTGTTTTTGCTTTTATGTGGTCTTAATTCTTTGTCTTGTAGAGTAAAAATATTACATAAAAATCAGA

hide sequence

RefSeq Acc Id:

NM_001288804 ⟹ NP_001275733

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	93,188,534 - 93,226,469 (-)	NCBI
HuRef	7	87,426,711 - 87,464,633 (-)	NCBI
CHM1_1	7	92,747,951 - 92,785,878 (-)	NCBI
T2T-CHM13v2.0	7	94,430,593 - 94,468,523 (-)	NCBI

Sequence:

show sequence

ACTGAGAACAGGGCACTGCATGCATGGGACAGGATGCTTTCATGGAGCCCTTCGGTGACACACTTGGGGTCTTTCAGTGCAAAATATACCTCCTTCTCTTCGATATTGTTGCAAACTGTTTACTGCTT
CGTTTTAAGTTATCTGTCTCATCTTATGAAATATGGAAGAAAGGTGCTTGCTCGGGGCTGAAGGTGACAGTGCCATCACACACTGTCCATGGCGTCAGAGGTCAGGCCCTCTACCTACCCGTCCACTA
TGGCTTCCACACTCCAGCATCAGACATCCAGATCATATGGCTATTTGAGAGACCCCACACAATGCCCAAATACTTACTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTTGGAATACCAACACAAGT
TCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCTGCCAGTCAGAAGATACAAGTC
ACGGTTGATGATCCTGTCACAAAGCCAGTGGTGCAGATTCATCCTCCCTCTGGGGCTGTGGAGTATGTGGGGAACATGACCCTGACATGCCATGTGGAAGGGGGCACTCGGCTAGCTTACCAATGGCT
AAAAAATGGGAGACCTGTCCACACCAGCTCCACCTACTCCTTTTCTCCCCAAAACAATACCCTTCATATTGCTCCAGTAACCAAGGAAGACATTGGGAATTACAGCTGCCTGGTGAGGAACCCTGTCA
GTGAAATGGAAAGTGATATCATTATGCCCATCATATATTATGGACCTTATGGACTTCAAGTGAATTCTGATAAAGGGCTAAAAGTAGGGGAAGTGTTTACTGTTGACCTTGGAGAGGCCATCCTATTT
GATTGTTCTGCTGATTCTCATCCCCCCAACACCTACTCCTGGATTAGGAGGACTGACAATACTACATATATCATTAAGCATGGGCCTCGCTTAGAAGTTGCATCTGAGAAAGTAGCCCAGAAGACAAT
GGACTATGTGTGCTGTGCTTACAACAACATAACCGGCAGGCAAGATGAAACTCATTTCACAGTTATCATCACTTCCGTAGGACTGGAGAAGCTTGCACAGAAAGGAAAATCATTGTCACCTTTAGCAA
GTATAACTGGAATATCACTATTTTTGATTATATCCATGTGTCTTCTCTTCCTATGGAAAAAATATCAACCCTACAAAGTTATAAAACAGAAACTAGAAGGCAGGCCAGAAACAGAATACAGGAAAGCT
CAAACATTTTCAGGCCATGAAGATGCTCTGGATGACTTCGGAATATATGAATTTGTTGCTTTTCCAGATGTTTCTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAGCCTCTGATTGTGTATCGGG
GCAAGATTTGCACAGTACAGTGTATGAAGTTATTCAGCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTGAACTTTCATGGGCTAAACAGTACATTCGAGTGAAATTCTGAAGAAACATTTTAAGG
AAAAACAGTGGAAAAGTATATTAATCTGGAATCAGTGAAGAAACCAAGACCAACACCTCTTACTCATTATTCCTTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATA
TACACAATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATAAGTTTTGTATGAAATATCTCTA
CAAACCTCAATTAGTTCTACTCTACACTTTCACTATCATCAACACTGAGACTATCCTGTCTCACCTACAAATGTGGAAACTTTACATTGTTCGATTTTTCAGCAGACTTTGTTTTATTAAATTTTTAT
TAGTGTTAAGAATGCTAAATTTATGTTTCAATTTTATTTCCAAATTTCTATCTTGTTATTTGTACAACAAAGTAATAAGGATGGTTGTCACAAAAACAAAACTATGCCTTCTCTTTTTTTTCAATCAC
CAGTAGTATTTTTGAGAAGACTTGTGAACACTTAAGGAAATGACTATTAAAGTCTTATTTTTATTTTTTTCAAGGAAAGATGGATTCAAATAAATTATTCTGTTTTTGCTTTTATGTGGTCTTAATTC
TTTGTCTTGTAGAGTAAAAATATTACATAAAAATCAGA

hide sequence

RefSeq Acc Id:

NM_001288810 ⟹ NP_001275739

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	93,188,534 - 93,219,571 (-)	NCBI
HuRef	7	87,426,711 - 87,464,633 (-)	NCBI
CHM1_1	7	92,747,951 - 92,778,954 (-)	NCBI
T2T-CHM13v2.0	7	94,430,593 - 94,461,624 (-)	NCBI

Sequence:

show sequence

ACCTAGAAGCCACTCTTCTTTGAAAAGGATTATCACCTGATCAGGTTCTCTCTGCATTTGCCCC
TTTAGATTGTGAAATGTGGCTCAAGGTCTTCACAACTTTCCTTTCCTTTGCAACAGGTGCTTGCTCGGGGCTGAAGGTGACAGTGCCATCACACACTGTCCATGGCGTCAGAGGTCAGGCCCTCTACC
TACCCGTCCACTATGGCTTCCACACTCCAGCATCAGACATCCAGATCATATGGCTATTTGAGAGACCCCACACAATGCCCAAATACTTACTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTTGGAA
TACCAACACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCTGCCAGTCA
GAAGATACAAGTCACGGTTGATGATCCTGTCACAAAGCCAGTGGTGCAGATTCATCCTCCCTCTGGGGCTGTGGAGTATGTGGGGAACATGACCCTGACATGCCATGTGGAAGGGGGCACTCGGCTAG
CTTACCAATGGCTAAAAAATGGGAGACCTGTCCACACCAGCTCCACCTACTCCTTTTCTCCCCAAAACAATACCCTTCATATTGCTCCAGTAACCAAGGAAGACATTGGGAATTACAGCTGCCTGGTG
AGGAACCCTGTCAGTGAAATGGAAAGTGATATCATTATGCCCATCATATATTATGGACCTTATGGACTTCAAGTGAATTCTGATAAAGGGCTAAAAGTAGGGGAAGTGTTTACTGTTGACCTTGGAGA
GGCCATCCTATTTGATTGTTCTGCTGATTCTCATCCCCCCAACACCTACTCCTGGATTAGGAGGACTGACAATACTACATATATCATTAAGCATGGGCCTCGCTTAGAAGTTGCATCTGAGAAAGTAG
CCCAGAAGACAATGGACTATGTGTGCTGTGCTTACAACAACATAACCGGCAGGCAAGATGAAACTCATTTCACAGTTATCATCACTTCCGTAGGACTGGAGAAGCTTGCACAGAAAGGAAAATCATTG
TCACCTTTAGCAAGTATAACTGGAATATCACTATTTTTGATTATATCCATGTGTCTTCTCTTCCTATGGAAAAAATATCAACCCTACAAAGGCCAGAAACAGAATACAGGAAAGCTCAAACATTTTCA
GGCCATGAAGATGCTCTGGATGACTTCGGAATATATGAATTTGTTGCTTTTCCAGATGTTTCTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAGCCTCTGATTGTGTATCGGGGCAAGATTTGCA
CAGTACAGTGTATGAAGTTATTCAGCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTGAACTTTCATGGGCTAAACAGTACATTCGAGTGAAATTCTGAAGAAACATTTTAAGGAAAAACAGTGGA
AAAGTATATTAATCTGGAATCAGTGAAGAAACCAAGACCAACACCTCTTACTCATTATTCCTTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCT
TGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATAAGTTTTGTATGAAATATCTCTACAAACCTCAATT
AGTTCTACTCTACACTTTCACTATCATCAACACTGAGACTATCCTGTCTCACCTACAAATGTGGAAACTTTACATTGTTCGATTTTTCAGCAGACTTTGTTTTATTAAATTTTTATTAGTGTTAAGAA
TGCTAAATTTATGTTTCAATTTTATTTCCAAATTTCTATCTTGTTATTTGTACAACAAAGTAATAAGGATGGTTGTCACAAAAACAAAACTATGCCTTCTCTTTTTTTTCAATCACCAGTAGTATTTT
TGAGAAGACTTGTGAACACTTAAGGAAATGACTATTAAAGTCTTATTTTTATTTTTTTCAAGGAAAGATGGATTCAAATAAATTATTCTGTTTTTGCTTTTATGTGGTCTTAATTCTTTGTCTTGTAG
AGTAAAAATATTACATAAAAATCAGA

hide sequence

RefSeq Acc Id:

NM_001346642 ⟹ NP_001333571

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	93,188,534 - 93,232,198 (-)	NCBI
T2T-CHM13v2.0	7	94,430,593 - 94,474,252 (-)	NCBI

Sequence:

show sequence

TCAGAGCGACCACTGCGATCGCCGGTCTTACAAAGGTGCTTGCACTAGGCAGTAGCTACTCTTC
GGCGAGACGGAAACCTAAGTCACAGGTGCTTGCTCGGGGCTGAAGGTGACAGTGCCATCACACACTGTCCATGGCGTCAGAGGTCAGGCCCTCTACCTACCCGTCCACTATGGCTTCCACACTCCAGC
ATCAGACATCCAGATCATATGGCTATTTGAGAGACCCCACACAATGCCCAAATACTTACTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTTGGAATACCAACACAAGTTCACCATGATGCCACCCA
ATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCTGCCAGTCAGAAGATACAAGTCACGGTTGATGATCCTGTC
ACAAAGCCAGTGGTGCAGATTCATCCTCCCTCTGGGGCTGTGGAGTATGTGGGGAACATGACCCTGACATGCCATGTGGAAGGGGGCACTCGGCTAGCTTACCAATGGCTAAAAAATGGGAGACCTGT
CCACACCAGCTCCACCTACTCCTTTTCTCCCCAAAACAATACCCTTCATATTGCTCCAGTAACCAAGGAAGACATTGGGAATTACAGCTGCCTGGTGAGGAACCCTGTCAGTGAAATGGAAAGTGATA
TCATTATGCCCATCATATATTATGGACCTTATGGACTTCAAGTGAATTCTGATAAAGGGCTAAAAGTAGGGGAAGTGTTTACTGTTGACCTTGGAGAGGCCATCCTATTTGATTGTTCTGCTGATTCT
CATCCCCCCAACACCTACTCCTGGATTAGGAGGACTGACAATACTACATATATCATTAAGCATGGGCCTCGCTTAGAAGTTGCATCTGAGAAAGTAGCCCAGAAGACAATGGACTATGTGTGCTGTGC
TTACAACAACATAACCGGCAGGCAAGATGAAACTCATTTCACAGTTATCATCACTTCCGTAGGACTGGAGAAGCTTGCACAGAAAGGAAAATCATTGTCACCTTTAGCAAGTATAACTGGAATATCAC
TATTTTTGATTATATCCATGTGTCTTCTCTTCCTATGGAAAAAATATCAACCCTACAAAGTTATAAAACAGAAACTAGAAGGCAGGCCAGAAACAGAATACAGGAAAGCTCAAACATTTTCAGGCCAT
GAAGATGCTCTGGATGACTTCGGAATATATGAATTTGTTGCTTTTCCAGATGTTTCTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAGCCTCTGATTGTGTATCGGGGCAAGATTTGCACAGTAC
AGTGTATGAAGTTATTCAGCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTGAACTTTCATGGGCTAAACAGTACATTCGAGTGAAATTCTGAAGAAACATTTTAAGGAAAAACAGTGGAAAAGTA
TATTAATCTGGAATCAGTGAAGAAACCAAGACCAACACCTCTTACTCATTATTCCTTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCA
ACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATAAGTTTTGTATGAAATATCTCTACAAACCTCAATTAGTTCT
ACTCTACACTTTCACTATCATCAACACTGAGACTATCCTGTCTCACCTACAAATGTGGAAACTTTACATTGTTCGATTTTTCAGCAGACTTTGTTTTATTAAATTTTTATTAGTGTTAAGAATGCTAA
ATTTATGTTTCAATTTTATTTCCAAATTTCTATCTTGTTATTTGTACAACAAAGTAATAAGGATGGTTGTCACAAAAACAAAACTATGCCTTCTCTTTTTTTTCAATCACCAGTAGTATTTTTGAGAA
GACTTGTGAACACTTAAGGAAATGACTATTAAAGTCTTATTTTTATTTTTTTCAAGGAAAGATGGATTCAAATAAATTATTCTGTTTTTGCTTTTATGTGGTCTTAATTCTTTGTCTTGTAGAGTAAA
AATATTACATAAAAATCAGA

hide sequence

RefSeq Acc Id:

NM_198151 ⟹ NP_937794

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	93,188,534 - 93,219,571 (-)	NCBI
GRCh37	7	92,817,899 - 92,855,783 (-)	NCBI
Build 36	7	92,655,835 - 92,686,806 (-)	NCBI Archive
Celera	7	87,522,416 - 87,560,293 (-)	RGD
HuRef	7	87,426,711 - 87,464,633 (-)	NCBI
CHM1_1	7	92,747,951 - 92,778,954 (-)	NCBI
T2T-CHM13v2.0	7	94,430,593 - 94,461,624 (-)	NCBI
CRA_TCAGchr7v2	7	92,147,226 - 92,185,103 (-)	RGD

Sequence:

show sequence

ACCTAGAAGCCACTCTTCTTTGAAAAGGATTATCACCTGATCAGGTTCTCTCTGCATTTGCCCC
TTTAGATTGTGAAATGTGGCTCAAGGTCTTCACAACTTTCCTTTCCTTTGCAACAGGTGCTTGCTCGGGGCTGAAGGTGACAGTGCCATCACACACTGTCCATGGCGTCAGAGGTCAGGCCCTCTACC
TACCCGTCCACTATGGCTTCCACACTCCAGCATCAGACATCCAGATCATATGGCTATTTGAGAGACCCCACACAATGCCCAAATACTTACTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTTGGAA
TACCAACACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCTGCCAGTCA
GAAGATACAAGTCACGGTTGATGATCCTGTCACAAAGCCAGTGGTGCAGATTCATCCTCCCTCTGGGGCTGTGGAGTATGTGGGGAACATGACCCTGACATGCCATGTGGAAGGGGGCACTCGGCTAG
CTTACCAATGGCTAAAAAATGGGAGACCTGTCCACACCAGCTCCACCTACTCCTTTTCTCCCCAAAACAATACCCTTCATATTGCTCCAGTAACCAAGGAAGACATTGGGAATTACAGCTGCCTGGTG
AGGAACCCTGTCAGTGAAATGGAAAGTGATATCATTATGCCCATCATATATTATGGACCTTATGGACTTCAAGTGAATTCTGATAAAGGGCTAAAAGTAGGGGAAGTGTTTACTGTTGACCTTGGAGA
GGCCATCCTATTTGATTGTTCTGCTGATTCTCATCCCCCCAACACCTACTCCTGGATTAGGAGGACTGACAATACTACATATATCATTAAGCATGGGCCTCGCTTAGAAGTTGCATCTGAGAAAGTAG
CCCAGAAGACAATGGACTATGTGTGCTGTGCTTACAACAACATAACCGGCAGGCAAGATGAAACTCATTTCACAGTTATCATCACTTCCGTAGGACTGGAGAAGCTTGCACAGAAAGGAAAATCATTG
TCACCTTTAGCAAGTATAACTGGAATATCACTATTTTTGATTATATCCATGTGTCTTCTCTTCCTATGGAAAAAATATCAACCCTACAAAGTTATAAAACAGAAACTAGAAGGCAGGCCAGAAACAGA
ATACAGGAAAGCTCAAACATTTTCAGGCCATGAAGATGCTCTGGATGACTTCGGAATATATGAATTTGTTGCTTTTCCAGATGTTTCTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAGCCTCTG
ATTGTGTATCGGGGCAAGATTTGCACAGTACAGTGTATGAAGTTATTCAGCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTGAACTTTCATGGGCTAAACAGTACATTCGAGTGAAATTCTGAAG
AAACATTTTAAGGAAAAACAGTGGAAAAGTATATTAATCTGGAATCAGTGAAGAAACCAAGACCAACACCTCTTACTCATTATTCCTTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAG
GTTTTTCAGCATATACACAATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATAAGTTTTGTA
TGAAATATCTCTACAAACCTCAATTAGTTCTACTCTACACTTTCACTATCATCAACACTGAGACTATCCTGTCTCACCTACAAATGTGGAAACTTTACATTGTTCGATTTTTCAGCAGACTTTGTTTT
ATTAAATTTTTATTAGTGTTAAGAATGCTAAATTTATGTTTCAATTTTATTTCCAAATTTCTATCTTGTTATTTGTACAACAAAGTAATAAGGATGGTTGTCACAAAAACAAAACTATGCCTTCTCTT
TTTTTTCAATCACCAGTAGTATTTTTGAGAAGACTTGTGAACACTTAAGGAAATGACTATTAAAGTCTTATTTTTATTTTTTTCAAGGAAAGATGGATTCAAATAAATTATTCTGTTTTTGCTTTTAT
GTGGTCTTAATTCTTTGTCTTGTAGAGTAAAAATATTACATAAAAATCAGA

hide sequence

RefSeq Acc Id:

XM_011516001 ⟹ XP_011514303

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	93,188,534 - 93,232,285 (-)	NCBI

Sequence:

show sequence

GGTAGCAACGATGAACTAAAGTGGCCAACCCAGGGACTACATCTCCCAGCAAGCAAAAGAGCGG
GTGCTTCAGTTAAGCCGGTGCTTGCTCGGGGCTGAAGGTGACAGTGCCATCACACACTGTCCATGGCGTCAGAGGTCAGGCCCTCTACCTACCCGTCCACTATGGCTTCCACACTCCAGCATCAGACA
TCCAGATCATATGGCTATTTGAGAGACCCCACACAATGCCCAAATACTTACTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTTGGAATACCAACACAAGTTCACCATGATGCCACCCAATGCATCT
CTGCTTATCAACCCACTGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCTGCCAGTCAGAAGATACAAGTCACGGTTGATGATCCTGTCACAAAGCC
AGTGGTGCAGATTCATCCTCCCTCTGGGGCTGTGGAGTATGTGGGGAACATGACCCTGACATGCCATGTGGAAGGGGGCACTCGGCTAGCTTACCAATGGCTAAAAAATGGGAGACCTGTCCACACCA
GCTCCACCTACTCCTTTTCTCCCCAAAACAATACCCTTCATATTGCTCCAGTAACCAAGGAAGACATTGGGAATTACAGCTGCCTGGTGAGGAACCCTGTCAGTGAAATGGAAAGTGATATCATTATG
CCCATCATATATTATGGACCTTATGGACTTCAAGTGAATTCTGATAAAGGGCTAAAAGTAGGGGAAGTGTTTACTGTTGACCTTGGAGAGGCCATCCTATTTGATTGTTCTGCTGATTCTCATCCCCC
CAACACCTACTCCTGGATTAGGAGGACTGACAATACTACATATATCATTAAGCATGGGCCTCGCTTAGAAGTTGCATCTGAGAAAGTAGCCCAGAAGACAATGGACTATGTGTGCTGTGCTTACAACA
ACATAACCGGCAGGCAAGATGAAACTCATTTCACAGTTATCATCACTTCCGTAGGACTGGAGAAGCTTGCACAGAAAGGAAAATCATTGTCACCTTTAGCAAGTATAACTGGAATATCACTATTTTTG
ATTATATCCATGTGTCTTCTCTTCCTATGGAAAAAATATCAACCCTACAAAGTTATAAAACAGAAACTAGAAGGCAGGCCAGAAACAGAATACAGGAAAGCTCAAACATTTTCAGGCCATGAAGATGC
TCTGGATGACTTCGGAATATATGAATTTGTTGCTTTTCCAGATGTTTCTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAGCCTCTGATTGTGTATCGGGGCAAGATTTGCACAGTACAGTGTATG
AAGTTATTCAGCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTGAACTTTCATGGGCTAAACAGTACATTCGAGTGAAATTCTGAAGAAACATTTTAAGGAAAAACAGTGGAAAAGTATATTAATC
TGGAATCAGTGAAGAAACCAAGACCAACACCTCTTACTCATTATTCCTTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAACAGAAAA
ACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATAAGTTTTGTATGAAATATCTCTACAAACCTCAATTAGTTCTACTCTACA
CTTTCACTATCATCAACACTGAGACTATCCTGTCTCACCTACAAATGTGGAAACTTTACATTGTTCGATTTTTCAGCAGACTTTGTTTTATTAAATTTTTATTAGTGTTAAGAATGCTAAATTTATGT
TTCAATTTTATTTCCAAATTTCTATCTTGTTATTTGTACAACAAAGTAATAAGGATGGTTGTCACAAAAACAAAACTATGCCTTCTCTTTTTTTTCAATCACCAGTAGTATTTTTGAGAAGACTTGTG
AACACTTAAGGAAATGACTATTAAAGTCTTATTTTTATTTTTTTCAAGGAAAGATGGATTCAAATAAATTATTCTGTTTTTGCTTTTA

hide sequence

RefSeq Acc Id:

XM_054357738 ⟹ XP_054213713

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	7	94,430,593 - 94,474,339 (-)	NCBI


Protein RefSeqs	NP_001034461	(Get FASTA)	NCBI Sequence Viewer
	NP_001275733	(Get FASTA)	NCBI Sequence Viewer
	NP_001275739	(Get FASTA)	NCBI Sequence Viewer
	NP_001333571	(Get FASTA)	NCBI Sequence Viewer
	NP_937794	(Get FASTA)	NCBI Sequence Viewer
	XP_011514303	(Get FASTA)	NCBI Sequence Viewer
	XP_054213713	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	A8MVW5	(Get FASTA)	NCBI Sequence Viewer
	AAI36301	(Get FASTA)	NCBI Sequence Viewer
	AAI36302	(Get FASTA)	NCBI Sequence Viewer
	AAI39907	(Get FASTA)	NCBI Sequence Viewer
	AAQ88711	(Get FASTA)	NCBI Sequence Viewer
	BAG53196	(Get FASTA)	NCBI Sequence Viewer
	BAG60603	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000340532
	ENSP00000340532.4
	ENSP00000377980
	ENSP00000377980.2
	ENSP00000389592
	ENSP00000390204
	ENSP00000390204.2

RefSeq Acc Id:	NP_937794 ⟸ NM_198151
- Peptide Label:	isoform 2 precursor
- UniProtKB:	A8MVW5 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MWLKVFTTFLSFATGACSGLKVTVPSHTVHGVRGQALYLPVHYGFHTPASDIQIIWLFERPHTMPKYLLGSVNKSVVPDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSASQKIQV TVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIMPIIYYGPYGLQVNSDKGLKVGEVFTVDLGEAILF DCSADSHPPNTYSWIRRTDNTTYIIKHGPRLEVASEKVAQKTMDYVCCAYNNITGRQDETHFTVIITSVGLEKLAQKGKSLSPLASITGISLFLIISMCLLFLWKKYQPYKVIKQKLEGRPETEYRKA QTFSGHEDALDDFGIYEFVAFPDVSGVSRIPSRSVPASDCVSGQDLHSTVYEVIQHIPAQQQDHPE hide sequence

RefSeq Acc Id:	NP_001034461 ⟸ NM_001039372
- Peptide Label:	isoform 1 precursor
- UniProtKB:	E9PDV5 (UniProtKB/Swiss-Prot), B9EG93 (UniProtKB/Swiss-Prot), B4DPJ1 (UniProtKB/Swiss-Prot), B3KTT4 (UniProtKB/Swiss-Prot), Q6UXI0 (UniProtKB/Swiss-Prot), A8MVW5 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGQDAFMEPFGDTLGVFQCKIYLLLFGACSGLKVTVPSHTVHGVRGQALYLPVHYGFHTPASDIQIIWLFERPHTMPKYLLGSVNKSVVPDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQG NGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIMPIIYYGPYGLQVNSDKGLKVGE VFTVDLGEAILFDCSADSHPPNTYSWIRRTDNTTYIIKHGPRLEVASEKVAQKTMDYVCCAYNNITGRQDETHFTVIITSVGLEKLAQKGKSLSPLASITGISLFLIISMCLLFLWKKYQPYKVIKQK LEGRPETEYRKAQTFSGHEDALDDFGIYEFVAFPDVSGVSRIPSRSVPASDCVSGQDLHSTVYEVIQHIPAQQQDHPE hide sequence

RefSeq Acc Id:	NP_001275733 ⟸ NM_001288804
- Peptide Label:	isoform 3
- UniProtKB:	A8MVW5 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGQDAFMEPFGDTLGVFQCKIYLLLFDIVANCLLLRFKLSVSSYEIWKKGACSGLKVTVPSHTVHGVRGQALYLPVHYGFHTPASDIQIIWLFERPHTMPKYLLGSVNKSVVPDLEYQHKFTMMPPNA SLLINPLQFPDEGNYIVKVNIQGNGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDII MPIIYYGPYGLQVNSDKGLKVGEVFTVDLGEAILFDCSADSHPPNTYSWIRRTDNTTYIIKHGPRLEVASEKVAQKTMDYVCCAYNNITGRQDETHFTVIITSVGLEKLAQKGKSLSPLASITGISLF LIISMCLLFLWKKYQPYKVIKQKLEGRPETEYRKAQTFSGHEDALDDFGIYEFVAFPDVSGVSRIPSRSVPASDCVSGQDLHSTVYEVIQHIPAQQQDHPE hide sequence

RefSeq Acc Id:	NP_001275739 ⟸ NM_001288810
- Peptide Label:	isoform 4 precursor
- UniProtKB:	C9JN07 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWLKVFTTFLSFATGACSGLKVTVPSHTVHGVRGQALYLPVHYGFHTPASDIQIIWLFERPHTMPKYLLGSVNKSVVPDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSASQKIQV TVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIMPIIYYGPYGLQVNSDKGLKVGEVFTVDLGEAILF DCSADSHPPNTYSWIRRTDNTTYIIKHGPRLEVASEKVAQKTMDYVCCAYNNITGRQDETHFTVIITSVGLEKLAQKGKSLSPLASITGISLFLIISMCLLFLWKKYQPYKGQKQNTGKLKHFQAMKM LWMTSEYMNLLLFQMFLVFPGSQAGLFQPLIVYRGKICTVQCMKLFSTSLPSSKTIQSELSWAKQYIRVKF hide sequence

RefSeq Acc Id:

XP_011514303 ⟸ XM_011516001

- Peptide Label:

isoform X1

- Sequence:

show sequence

MPKYLLGSVNKSVVPDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTRLAYQWLKNGRPVHTSSTYSFSPQNNT
LHIAPVTKEDIGNYSCLVRNPVSEMESDIIMPIIYYGPYGLQVNSDKGLKVGEVFTVDLGEAILFDCSADSHPPNTYSWIRRTDNTTYIIKHGPRLEVASEKVAQKTMDYVCCAYNNITGRQDETHFT
VIITSVGLEKLAQKGKSLSPLASITGISLFLIISMCLLFLWKKYQPYKVIKQKLEGRPETEYRKAQTFSGHEDALDDFGIYEFVAFPDVSGVSRIPSRSVPASDCVSGQDLHSTVYEVIQHIPAQQQD
HPE

hide sequence

Protein Domains

Ig-like Ig-like C2-type

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A8MVW5-F1-model_v2	AlphaFold	A8MVW5	1-462	view protein structure

RGD ID:

6805771

Promoter ID:

HG_KWN:58598

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

K562

Transcripts:

OTTHUMT00000317480, UC010LFF.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	7	92,686,716 - 92,687,267 (-)	MPROMDB

RGD ID:

7211081

Promoter ID:

EPDNEW_H11286

Type:

initiation region

Name:

HEPACAM2_1

Description:

HEPACAM family member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	7	93,219,504 - 93,219,564	EPDNEW

Database	Acc Id	Source(s)
COSMIC	HEPACAM2	COSMIC
Ensembl Genes	ENSG00000188175	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000341723	ENTREZGENE
	ENST00000341723.8	UniProtKB/Swiss-Prot
	ENST00000394468	ENTREZGENE
	ENST00000394468.7	UniProtKB/Swiss-Prot
	ENST00000440868	ENTREZGENE
	ENST00000453812	ENTREZGENE
	ENST00000453812.2	UniProtKB/Swiss-Prot
Gene3D-CATH	2.60.40.10	UniProtKB/Swiss-Prot
GTEx	ENSG00000188175	GTEx
HGNC ID	HGNC:27364	ENTREZGENE
Human Proteome Map	HEPACAM2	Human Proteome Map
InterPro	HEPACAM_domain	UniProtKB/Swiss-Prot
	Ig-like_dom	UniProtKB/Swiss-Prot
	Ig-like_dom_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Ig_sub	UniProtKB/Swiss-Prot
	Ig_sub2	UniProtKB/Swiss-Prot
KEGG Report	hsa:253012	UniProtKB/Swiss-Prot
NCBI Gene	253012	ENTREZGENE
OMIM	614133	OMIM
PANTHER	HEPACAM FAMILY MEMBER 2	UniProtKB/Swiss-Prot
	HEPACAM FAMILY MEMBER 2-RELATED	UniProtKB/Swiss-Prot
Pfam	Ig_3	UniProtKB/Swiss-Prot
PharmGKB	PA162390849	PharmGKB
PROSITE	IG_LIKE	UniProtKB/Swiss-Prot
SMART	IGc2	UniProtKB/Swiss-Prot
	SM00409	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48726	UniProtKB/Swiss-Prot
UniProt	A8MVW5	ENTREZGENE
	B3KTT4	ENTREZGENE
	B4DPJ1	ENTREZGENE
	B9EG93	ENTREZGENE
	C9JN07	ENTREZGENE, UniProtKB/TrEMBL
	E9PDV5	ENTREZGENE
	HECA2_HUMAN	UniProtKB/Swiss-Prot
	L8EC70_HUMAN	UniProtKB/TrEMBL
	Q6UXI0	ENTREZGENE
UniProt Secondary	B3KTT4	UniProtKB/Swiss-Prot
	B4DPJ1	UniProtKB/Swiss-Prot
	B9EG93	UniProtKB/Swiss-Prot
	E9PDV5	UniProtKB/Swiss-Prot
	Q6UXI0	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Human Phenotype Annotations - ClinVar

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Imported Disease Annotations - ClinVar

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