HEPACAM2 (HEPACAM family member 2)

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Gene: HEPACAM2 (HEPACAM family member 2) Chlorocebus sabaeus

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Symbol:

HEPACAM2

Name:

HEPACAM family member 2

RGD ID:

18403256

Description:

INVOLVED IN centrosome cycle (inferred); ASSOCIATED WITH pleomorphic xanthoastrocytoma (ortholog); prostate cancer (ortholog); FOUND IN centrosome (inferred); cytoplasm (inferred); endomembrane system (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	55,788,028 - 55,829,876 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	55,788,084 - 55,824,890 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	48,476,241 - 48,518,452 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

pleomorphic xanthoastrocytoma (ISO)

prostate cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

centrosome cycle (IEA)

Cellular Component

centrosome (IEA)

cytoplasm (IEA)

endomembrane system (IEA)

Golgi apparatus (IEA)

intracellular membrane-bounded organelle (IEA)

membrane (IEA)

midbody (IEA)

mitotic spindle (IEA)

nucleoplasm (IEA)

spindle (IEA)

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

HEPACAM2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	55,788,028 - 55,829,876 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	55,788,084 - 55,824,890 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	48,476,241 - 48,518,452 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

HEPACAM2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	93,188,534 - 93,232,285 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	93,188,534 - 93,226,469 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	92,817,847 - 92,861,511 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	92,655,835 - 92,693,718 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	87,522,416 - 87,560,293 (-)	NCBI		Celera
Cytogenetic Map	7	q21.2	NCBI
HuRef	7	87,426,711 - 87,464,583 (-)	NCBI		HuRef
CHM1_1	7	92,747,951 - 92,785,828 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	94,430,593 - 94,474,339 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	92,147,226 - 92,185,103 (-)	NCBI

Hepacam2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	3,457,202 - 3,498,319 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	3,457,096 - 3,498,298 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	3,457,089 - 3,498,322 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	3,457,096 - 3,498,298 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	3,407,089 - 3,444,498 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	3,407,089 - 3,444,498 (-)	NCBI		MGSCv36	mm8
Celera	6	3,614,440 - 3,652,753 (-)	NCBI		Celera
Cytogenetic Map	6	A1	NCBI
cM Map	6	1.8	NCBI

Hepacam2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	32,400,523 - 32,435,936 (-)	NCBI		GRCr8
mRatBN7.2	4	31,446,195 - 31,480,859 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	31,446,169 - 31,480,953 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	36,418,895 - 36,453,532 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	32,345,009 - 32,379,640 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	30,702,637 - 30,737,653 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	28,402,862 - 28,437,722 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	28,403,125 - 28,437,676 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	28,306,417 - 28,340,959 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	28,266,853 - 28,301,151 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	28,280,224 - 28,314,967 (-)	NCBI
Celera	4	26,832,709 - 26,867,020 (-)	NCBI		Celera
Cytogenetic Map	4	q13	NCBI

Hepacam2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955432	10,086,698 - 10,128,238 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955432	10,088,162 - 10,128,169 (-)	NCBI	ChiLan1.0	ChiLan1.0

HEPACAM2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	111,032,485 - 111,076,452 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	159,297,128 - 159,341,095 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	85,145,026 - 85,183,278 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	98,739,782 - 98,777,713 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

HEPACAM2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	18,691,326 - 18,742,195 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	18,695,910 - 18,728,357 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	18,256,363 - 18,302,610 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	18,504,164 - 18,550,434 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	18,504,164 - 18,543,864 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	18,663,387 - 18,709,653 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	18,398,966 - 18,445,215 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	18,650,643 - 18,689,626 (-)	NCBI		UU_Cfam_GSD_1.0

Hepacam2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	32,106,315 - 32,148,426 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936803	656,770 - 693,499 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936803	663,950 - 693,530 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HEPACAM2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	73,020,281 - 73,067,520 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	73,020,279 - 73,074,872 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	79,735,226 - 79,743,982 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Hepacam2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624813	13,512 - 53,004 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624813	13,552 - 52,913 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
67	27	20	27	27	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007982148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007982149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007982150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007982151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007982152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005242413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000010719 ⟹ ENSCSAP00000008808

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	21	55,788,084 - 55,824,890 (+)	Ensembl

RefSeq Acc Id:

XM_007982149 ⟹ XP_007980340

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	21	55,788,029 - 55,829,876 (+)	NCBI
Vero_WHO_p1.0	NW_023666042	48,476,243 - 48,518,451 (-)	NCBI

Sequence:

show sequence

TCACAGAAGCAAGAGGCAAGATAGGGTCTGTTACCTCATTGCTAATTTCCCTAGCAAATAAACC
AGCAGCTGCTGGTCCAGGTTACCACCGAGAACAGGTCACTGCATGCATGGGACAGGATGCTTTC
ATGGAGCCCTTCGGTGACACACTTGGGGTCTTTCAGTGCAAACTATACCTCCTTCTTTTCGGTG
CTTGCTCGGGGCTGAGGGTGACAGTGCCATCACACACTGTCCATGGCATCAGAGGTCAGGCCCT
CTACCTACCCGTCCACTATGGCTTCCACACTCCAGCATCAGACATCCAGATCATATGGCTATTT
GAGAGACCCCACACGATGCCCAAATACTTATTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACT
TGGAATACCAACACAAGTTCACCATGATGCCACCCAATGCCTCTCTGCTAATCAACCCATTGCA
GTTCTCTGATGAAGGCAATTACATTGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCCTCC
AGTCAGAAGATACAAGTCACGGTTGATGATCCTGTCACAAAGCCAGTGGTGCAGATTCATCCTC
CCTCTGGGTCCGTGGAGTATGTGGGGAACATGACCCTGACATGCCAGGCGGAAGGGGGCACTCG
GCTAGTTTACCAATGGCTAAAAAATGGGAGACCTGCCCACACCAGCTCTACCTACTCCTTTTCT
CCCCAAAACAATACCCTTCATATTGCTCCAGTGACCAAGGAAGACATTGGGAATTACAGCTGCC
TGGTGAGGAACCCTGTCAGTGAAATGGAAAGTGATATCATTATGCCCATCATATATTATGGACC
TTATGGACTTCAAGTGAATTCTGATAAAGGGCTAAAAGTAGGGGAAGTGTTTACTGTTGACCTT
GGAGAGGCCATCCTATTTGACTGTTCTGCTGATTCTTATCCCCCCAACACCTACTCCTGGATTA
GGAGGACTGACAATACAACACATATCATTAAGCATGGGCCTCGCTTAGAAGTTGCATCTGAGAA
AGTAGCGCAGAAGACAACTGACTATGTGTGCTGTGCTTACAACAATATAACCGGCAGGCAAGAT
GAAACTCATTTCACAGTTATCATCACTTCTGTAGGACTGGAGAAGCTTGCACAAAAAGGAAAAT
CATTGTCACCTTTAGCAAGTATAACTGGAATATCACTATTTTTGATTATATCCATGTGTCTTCT
CTTCCTATGGAAAAAATATCAACCCTACAAAGTTATAAAACAGAAACTAGAAGGCAGGCCAGAA
ACAGAATACAGGAAAGCTCAAACATTTTCAGGCCATGAAGATGTTCTGGATGACTTCGGAATAT
ATGAATTTGTTGCTTTTCCAGATGCTTCTGGTGTTTCCAGGATCCCAAGCAGATCTGTTCCAGT
CTCTGATGGTATATCGGGACAAGATTTGCACAGTACAATATATGAAGTTATTCAGCACATCCCT
GCCCAGCAGCAAGACCAGCCAGAGATGGATGTAGCAATTCCAGAAGTGATATAAACATGCCGCA

hide sequence

RefSeq Acc Id:

XM_007982150 ⟹ XP_007980341

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	21	55,788,031 - 55,824,820 (+)	NCBI
Vero_WHO_p1.0	NW_023666042	48,481,721 - 48,518,448 (-)	NCBI

Sequence:

show sequence

ACAGAAGCAAGAGGCAAGATAGGGTCTGTTACCTCATTGCTAATTTCCCTAGCAAATAAACCAG
CAGCTGCTGGTCCAGGTTACCACCGAGAACAGGTCACTGCATGCATGGGACAGGATGCTTTCAT
GGAGCCCTTCGGTGACACACTTGGGGTCTTTCAGTGCAAACTATACCTCCTTCTTTTCGGTGCT
TGCTCGGGGCTGAGGGTGACAGTGCCATCACACACTGTCCATGGCATCAGAGGTCAGGCCCTCT
ACCTACCCGTCCACTATGGCTTCCACACTCCAGCATCAGACATCCAGATCATATGGCTATTTGA
GAGACCCCACACGATGCCCAAATACTTATTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTTG
GAATACCAACACAAGTTCACCATGATGCCACCCAATGCCTCTCTGCTAATCAACCCATTGCAGT
TCTCTGATGAAGGCAATTACATTGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCCTCCAG
TCAGAAGATACAAGTCACGGTTGATGATCCTGTCACAAAGCCAGTGGTGCAGATTCATCCTCCC
TCTGGGTCCGTGGAGTATGTGGGGAACATGACCCTGACATGCCAGGCGGAAGGGGGCACTCGGC
TAGTTTACCAATGGCTAAAAAATGGGAGACCTGCCCACACCAGCTCTACCTACTCCTTTTCTCC
CCAAAACAATACCCTTCATATTGCTCCAGTGACCAAGGAAGACATTGGGAATTACAGCTGCCTG
GTGAGGAACCCTGTCAGTGAAATGGAAAGTGATATCATTATGCCCATCATATATTATGGACCTT
ATGGACTTCAAGTGAATTCTGATAAAGGGCTAAAAGTAGGGGAAGTGTTTACTGTTGACCTTGG
AGAGGCCATCCTATTTGACTGTTCTGCTGATTCTTATCCCCCCAACACCTACTCCTGGATTAGG
AGGACTGACAATACAACACATATCATTAAGCATGGGCCTCGCTTAGAAGTTGCATCTGAGAAAG
TAGCGCAGAAGACAACTGACTATGTGTGCTGTGCTTACAACAATATAACCGGCAGGCAAGATGA
AACTCATTTCACAGTTATCATCACTTCTGTAGGACTGGAGAAGCTTGCACAAAAAGGAAAATCA
TTGTCACCTTTAGCAAGTATAACTGGAATATCACTATTTTTGATTATATCCATGTGTCTTCTCT
TCCTATGGAAAAAATATCAACCCTACAAAGTTATAAAACAGAAACTAGAAGGCAGGCCAGAAAC
AGAATACAGGAAAGCTCAAACATTTTCAGGCCATGAAGATGTTCTGGATGACTTCGGAATATAT
GAATTTGTTGCTTTTCCAGATGCTTCTGGTGTTTCCAGGATCCCAAGCAGATCTGTTCCAGTCT
CTGATGGTATATCGGGACAAGATTTGCACAGTACAATATATGAAGTTATTCAGCACATCCCTGC
CCAGCAGCAAGACCAGCCAGAGTGAACTCTCATGGGCTAAACAGCACATTAGAGTGAAATTCTG
AAGAAATATTTTAAGGAAAAACAGTGGAAAAGTATATTAATCTGGAATCAGTGAAGAAACCGAG
ACCAACACATCTTACTCATTACTCCTTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTG
CAGGTTTTTCAGCATATACACAATGTCTTGTGCAACAGAAAAACATGTTGAGGAAATATTCCTC
AGTGGGCAGTCTTTCTCATGCTGATGAGTAGAATGAAAATGACAGGGGTTTCCTCTTTCGTTTT
GTACGAAATATCTCTGCAAAGCTCAATTAGTTCCACTCTATACTTCCACTGTCATCAACACTGA
GACTATCCTGTCTCACCTACAAATGTGGAAACTTTACATTGTTAGATTTTTCAGCAGACTTTGT
TTTATTAAATTTTTATTAGTGTTAGGAATCCTAAATTTATGTTTCAATTTTATTTCCAAATTTC
TATCTTGTTATTTGTACAACAAAGTAATAAGGATGGTTGTCACAAAAACAAAACTATGCTTTCT
CTTTTTTTTCAATCACCAGTAGTATTTTTGAGAAGATTTGTACACAGTTAAGGAAATGACTATT
AAAGTCTTATTTTTATTTTTTTCGAGGAAAGATGGATTCAAATAAATTATTCTGTTTTTGCTTT
TA

hide sequence

RefSeq Acc Id:

XM_007982151 ⟹ XP_007980342

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	21	55,788,030 - 55,821,132 (+)	NCBI
Vero_WHO_p1.0	NW_023666042	48,485,381 - 48,518,451 (-)	NCBI

Sequence:

show sequence

CACAGAAGCAAGAGGCAAGATAGGGTCTGTTACCTCATTGCTAATTTCCCTAGCAAATAAACCA
GCAGCTGCTGGTCCAGGTTACCACCGAGAACAGGTCACTGCATGCATGGGACAGGATGCTTTCA
TGGAGCCCTTCGGTGACACACTTGGGGTCTTTCAGTGCAAACTATACCTCCTTCTTTTCGGTGC
TTGCTCGGGGCTGAGGGTGACAGTGCCATCACACACTGTCCATGGCATCAGAGGTCAGGCCCTC
TACCTACCCGTCCACTATGGCTTCCACACTCCAGCATCAGACATCCAGATCATATGGCTATTTG
AGAGACCCCACACGATGCCCAAATACTTATTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTT
GGAATACCAACACAAGTTCACCATGATGCCACCCAATGCCTCTCTGCTAATCAACCCATTGCAG
TTCTCTGATGAAGGCAATTACATTGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCCTCCA
GTCAGAAGATACAAGTCACGGTTGATGATCCTGTCACAAAGCCAGTGGTGCAGATTCATCCTCC
CTCTGGGTCCGTGGAGTATGTGGGGAACATGACCCTGACATGCCAGGCGGAAGGGGGCACTCGG
CTAGTTTACCAATGGCTAAAAAATGGGAGACCTGCCCACACCAGCTCTACCTACTCCTTTTCTC
CCCAAAACAATACCCTTCATATTGCTCCAGTGACCAAGGAAGACATTGGGAATTACAGCTGCCT
GGTGAGGAACCCTGTCAGTGAAATGGAAAGTGATATCATTATGCCCATCATATATTATGGACCT
TATGGACTTCAAGTGAATTCTGATAAAGGGCTAAAAGTAGGGGAAGTGTTTACTGTTGACCTTG
GAGAGGCCATCCTATTTGACTGTTCTGCTGATTCTTATCCCCCCAACACCTACTCCTGGATTAG
GAGGACTGACAATACAACACATATCATTAAGCATGGGCCTCGCTTAGAAGTTGCATCTGAGAAA
GTAGCGCAGAAGACAACTGACTATGTGTGCTGTGCTTACAACAATATAACCGGCAGGCAAGATG
AAACTCATTTCACAGTTATCATCACTTCTGTAGGACTGGAGAAGCTTGCACAAAAAGGAAAATC
ATTGTCACCTTTAGCAAGTATAACTGGAATATCACTATTTTTGATTATATCCATGTGTCTTCTC
TTCCTATGGAAAAAATATCAACCCTACAAAGTTATAAAACAGAAACTAGAAGGCAGGCCAGAAA
CAGAATACAGGAAAGCTCAAACATTTTCAGGCCATGAAGATGTTCTGGATGACTTCGGAATATA
TGAATTTGTTGCTTTTCCAGATGCTTCTGGTGTTTCCAGGGTTGGTTTTCCTAGTGGCTGATTA
ACCAAGAAGTAGAATTCTGCTTCACCAGAGGTATCCCAAGCAGATCTGTTCCAGTCTCTGATGG
TATATCGGGACAAGATTTGCACAGTACAATATATGAAGTTATTCAGCACATCCCTG

hide sequence

RefSeq Acc Id:

XM_007982152 ⟹ XP_007980343

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	21	55,795,178 - 55,824,820 (+)	NCBI
Vero_WHO_p1.0	NW_023666042	48,481,721 - 48,511,339 (-)	NCBI

Sequence:

show sequence

ATGTGGCTCAAGTTCTTCACAACCTTCCTTTCCTTTGCAACAGGTGCTTGCTCGGGGCTGAGGG
TGACAGTGCCATCACACACTGTCCATGGCATCAGAGGTCAGGCCCTCTACCTACCCGTCCACTA
TGGCTTCCACACTCCAGCATCAGACATCCAGATCATATGGCTATTTGAGAGACCCCACACGATG
CCCAAATACTTATTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTTGGAATACCAACACAAGT
TCACCATGATGCCACCCAATGCCTCTCTGCTAATCAACCCATTGCAGTTCTCTGATGAAGGCAA
TTACATTGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCCTCCAGTCAGAAGATACAAGTC
ACGGTTGATGATCCTGTCACAAAGCCAGTGGTGCAGATTCATCCTCCCTCTGGGTCCGTGGAGT
ATGTGGGGAACATGACCCTGACATGCCAGGCGGAAGGGGGCACTCGGCTAGTTTACCAATGGCT
AAAAAATGGGAGACCTGCCCACACCAGCTCTACCTACTCCTTTTCTCCCCAAAACAATACCCTT
CATATTGCTCCAGTGACCAAGGAAGACATTGGGAATTACAGCTGCCTGGTGAGGAACCCTGTCA
GTGAAATGGAAAGTGATATCATTATGCCCATCATATATTATGGACCTTATGGACTTCAAGTGAA
TTCTGATAAAGGGCTAAAAGTAGGGGAAGTGTTTACTGTTGACCTTGGAGAGGCCATCCTATTT
GACTGTTCTGCTGATTCTTATCCCCCCAACACCTACTCCTGGATTAGGAGGACTGACAATACAA
CACATATCATTAAGCATGGGCCTCGCTTAGAAGTTGCATCTGAGAAAGTAGCGCAGAAGACAAC
TGACTATGTGTGCTGTGCTTACAACAATATAACCGGCAGGCAAGATGAAACTCATTTCACAGTT
ATCATCACTTCTGTAGGACTGGAGAAGCTTGCACAAAAAGGAAAATCATTGTCACCTTTAGCAA
GTATAACTGGAATATCACTATTTTTGATTATATCCATGTGTCTTCTCTTCCTATGGAAAAAATA
TCAACCCTACAAAGGCCAGAAACAGAATACAGGAAAGCTCAAACATTTTCAGGCCATGAAGATG
TTCTGGATGACTTCGGAATATATGAATTTGTTGCTTTTCCAGATGCTTCTGGTGTTTCCAGGAT
CCCAAGCAGATCTGTTCCAGTCTCTGATGGTATATCGGGACAAGATTTGCACAGTACAATATAT
GAAGTTATTCAGCACATCCCTGCCCAGCAGCAAGACCAGCCAGAGTGAACTCTCATGGGCTAAA
CAGCACATTAGAGTGAAATTCTGAAGAAATATTTTAAGGAAAAACAGTGGAAAAGTATATTAAT
CTGGAATCAGTGAAGAAACCGAGACCAACACATCTTACTCATTACTCCTTTACATGCAGAATAG
AGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAACAGAAA
AACATGTTGAGGAAATATTCCTCAGTGGGCAGTCTTTCTCATGCTGATGAGTAGAATGAAAATG
ACAGGGGTTTCCTCTTTCGTTTTGTACGAAATATCTCTGCAAAGCTCAATTAGTTCCACTCTAT
ACTTCCACTGTCATCAACACTGAGACTATCCTGTCTCACCTACAAATGTGGAAACTTTACATTG
TTAGATTTTTCAGCAGACTTTGTTTTATTAAATTTTTATTAGTGTTAGGAATCCTAAATTTATG
TTTCAATTTTATTTCCAAATTTCTATCTTGTTATTTGTACAACAAAGTAATAAGGATGGTTGTC
ACAAAAACAAAACTATGCTTTCTCTTTTTTTTCAATCACCAGTAGTATTTTTGAGAAGATTTGT
ACACAGTTAAGGAAATGACTATTAAAGTCTTATTTTTATTTTTTTCGAGGAAAGATGGATTCAA
ATAAATTATTCTGTTTTTGCTTTTA

hide sequence

RefSeq Acc Id:

XR_005242413

Type:

NON-CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666042	48,476,241 - 48,518,452 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_007980340	(Get FASTA)	NCBI Sequence Viewer
	XP_007980341	(Get FASTA)	NCBI Sequence Viewer
	XP_007980342	(Get FASTA)	NCBI Sequence Viewer
	XP_007980343	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000008808.1

RefSeq Acc Id:	XP_007980340 ⟸ XM_007982149
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RJL9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007980342 ⟸ XM_007982151
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9RJL9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007980341 ⟸ XM_007982150
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RJL9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007980343 ⟸ XM_007982152
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSCSAP00000008808 ⟸ ENSCSAT00000010719

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000012630	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000010719.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	HEPACAM_domain	UniProtKB/TrEMBL
	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Ig_sub2	UniProtKB/TrEMBL
	Ig_V-set	UniProtKB/TrEMBL
NCBI Gene	HEPACAM2	ENTREZGENE
PANTHER	HEPACAM FAMILY MEMBER 2	UniProtKB/TrEMBL
	HEPACAM FAMILY MEMBER 2-RELATED	UniProtKB/TrEMBL
Pfam	Ig_3	UniProtKB/TrEMBL
	V-set	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
SMART	IGc2	UniProtKB/TrEMBL
	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	A0A0D9RJL9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar