Rpl27l3 (ribosomal protein L27 like 3) - Rat Genome Database

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Gene: Rpl27l3 (ribosomal protein L27 like 3) Rattus norvegicus
Analyze
Symbol: Rpl27l3
Name: ribosomal protein L27 like 3
RGD ID: 1585829
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L27-like; large ribosomal subunit protein eL27-like; LOC680960; similar to ribosomal protein L27
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81131,456,953 - 31,457,307 (-)NCBIGRCr8
mRatBN7.21117,970,051 - 17,970,433 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01117,853,867 - 17,854,268 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01121,500,314 - 21,500,710 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41118,332,428 - 18,346,425 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1117,934,889 - 17,935,291 (-)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline

Genomics

Variants

.
Variants in Rpl27l3
1 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
2290451Scl58Serum cholesterol level QTL 583.48blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)111283104625121472Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11135331169Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
634341Bw121Body weight QTL 1213.56abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)11121836709Rat
1641927Alcrsp10Alcohol response QTL 10alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)11843667453436674Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)111647204744285911Rat


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_039088728   ⟹   XP_038944656
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81131,456,953 - 31,457,307 (-)NCBI
mRatBN7.21117,970,051 - 17,970,433 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038944656 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_038944656   ⟸   XM_039088728


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-22122 BioCyc
NCBI Gene 680960 ENTREZGENE
PhenoGen Rpl27l3 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Rpl27l3  ribosomal protein L27 like 3  LOC680960  similar to ribosomal protein L27  Symbol and Name Changed 1299863 APPROVED
2006-11-19 LOC680960  similar to ribosomal protein L27      Symbol and Name status set to provisional 70820 PROVISIONAL