Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Diabetic Nephropathies | | ISO | DGKH (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:20665664 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Diabetic Nephropathies | | ISO | DGKH (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:20665664 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | GOA pipeline | RGD automated data pipeline |
3. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
4. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
Dgkh (Rattus norvegicus - Norway rat) |
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DGKH (Homo sapiens - human) |
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Dgkh (Mus musculus - house mouse) |
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Dgkh (Chinchilla lanigera - long-tailed chinchilla) |
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DGKH (Pan paniscus - bonobo/pygmy chimpanzee) |
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DGKH (Canis lupus familiaris - dog) |
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Dgkh (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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DGKH (Sus scrofa - pig) |
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DGKH (Chlorocebus sabaeus - green monkey) |
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Dgkh (Heterocephalus glaber - naked mole-rat) |
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Variants in Dgkh
1211 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
D15Got66 |
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BE110031 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 4 | 6 | 10 | 2 | 11 | 8 | |||||||
Low | 3 | 43 | 38 | 26 | 13 | 26 | 8 | 8 | 64 | 33 | 30 | 3 | 8 |
Below cutoff | 14 | 14 | 14 | 3 |
RefSeq Transcripts | NM_001427603 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_001072779 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_003752832 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006222035 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006222036 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006252363 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006252364 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008770099 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008770918 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008770919 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008770920 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017599915 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017604938 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017604939 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039094035 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039094036 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039094038 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063274439 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063274440 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063274441 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063274442 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | FQ228184 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
JAXUCZ010000015 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000058079 ⟹ ENSRNOP00000054887 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000097320 ⟹ ENSRNOP00000077411 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000100616 ⟹ ENSRNOP00000089877 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001427603 ⟹ NP_001414532 | ||||||||
RefSeq Status: | VALIDATED | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_006252363 ⟹ XP_006252425 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_008770920 ⟹ XP_008769142 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039094035 ⟹ XP_038949963 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039094036 ⟹ XP_038949964 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039094038 ⟹ XP_038949966 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063274439 ⟹ XP_063130509 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063274440 ⟹ XP_063130510 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063274441 ⟹ XP_063130511 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063274442 ⟹ XP_063130512 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001414532 | (Get FASTA) | NCBI Sequence Viewer |
XP_006252425 | (Get FASTA) | NCBI Sequence Viewer | |
XP_008769142 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038949963 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038949964 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038949966 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063130509 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063130510 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063130511 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063130512 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000054887.4 | ||
ENSRNOP00000077411.1 | |||
ENSRNOP00000089877.1 |
RefSeq Acc Id: | XP_006252425 ⟸ XM_006252363 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8I6A873 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_008769142 ⟸ XM_008770920 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8I6A873 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000054887 ⟸ ENSRNOT00000058079 |
RefSeq Acc Id: | XP_038949963 ⟸ XM_039094035 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038949964 ⟸ XM_039094036 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038949966 ⟸ XM_039094038 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8I6A873 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSRNOP00000077411 ⟸ ENSRNOT00000097320 |
RefSeq Acc Id: | ENSRNOP00000089877 ⟸ ENSRNOT00000100616 |
RefSeq Acc Id: | NP_001414532 ⟸ NM_001427603 |
RefSeq Acc Id: | XP_063130509 ⟸ XM_063274439 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_063130510 ⟸ XM_063274440 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_063130511 ⟸ XM_063274441 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_063130512 ⟸ XM_063274442 |
- Peptide Label: | isoform X5 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-D3ZSZ6-F1-model_v2 | AlphaFold | D3ZSZ6 | 1-1210 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
Database | Acc Id | Source(s) |
AGR Gene | RGD:1561955 | AgrOrtholog |
BioCyc Gene | G2FUF-13011 | BioCyc |
Ensembl Genes | ENSRNOG00000010065 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000058079.5 | UniProtKB/TrEMBL |
ENSRNOT00000097320.1 | UniProtKB/TrEMBL | |
ENSRNOT00000100616.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.10.150.50 | UniProtKB/TrEMBL |
2.30.29.30 | UniProtKB/TrEMBL | |
2.60.200.40 | UniProtKB/TrEMBL | |
3.30.60.20 | UniProtKB/TrEMBL | |
InterPro | ATP-NAD_kinase_dom_1 | UniProtKB/TrEMBL |
ATP-NAD_kinase_PpnK-typ | UniProtKB/TrEMBL | |
C1-like_sf | UniProtKB/TrEMBL | |
C1_DGKeta_rpt2 | UniProtKB/TrEMBL | |
DGK | UniProtKB/TrEMBL | |
Diacylglycerol_kin_accessory | UniProtKB/TrEMBL | |
Diacylglycerol_kinase_cat_dom | UniProtKB/TrEMBL | |
PH_like_dom | UniProtKB/TrEMBL | |
Pleckstrin_homology | UniProtKB/TrEMBL | |
Prot_Kinase_C-like_PE/DAG-bd | UniProtKB/TrEMBL | |
SAM | UniProtKB/TrEMBL | |
SAM/pointed | UniProtKB/TrEMBL | |
NCBI Gene | 361076 | ENTREZGENE |
PANTHER | DIACYLGLYCEROL KINASE ETA | UniProtKB/TrEMBL |
PTHR11255 | UniProtKB/TrEMBL | |
Pfam | C1_1 | UniProtKB/TrEMBL |
DAGK_acc | UniProtKB/TrEMBL | |
DAGK_cat | UniProtKB/TrEMBL | |
PF00169 | UniProtKB/TrEMBL | |
SAM_2 | UniProtKB/TrEMBL | |
PhenoGen | Dgkh | PhenoGen |
PROSITE | DAGK | UniProtKB/TrEMBL |
PH_DOMAIN | UniProtKB/TrEMBL | |
SAM_DOMAIN | UniProtKB/TrEMBL | |
ZF_DAG_PE_1 | UniProtKB/TrEMBL | |
ZF_DAG_PE_2 | UniProtKB/TrEMBL | |
RatGTEx | ENSRNOG00000010065 | RatGTEx |
SMART | DAGKa | UniProtKB/TrEMBL |
DAGKc | UniProtKB/TrEMBL | |
SAM | UniProtKB/TrEMBL | |
SM00109 | UniProtKB/TrEMBL | |
SM00233 | UniProtKB/TrEMBL | |
Superfamily-SCOP | PH domain-like | UniProtKB/TrEMBL |
SAM_homology | UniProtKB/TrEMBL | |
SSF111331 | UniProtKB/TrEMBL | |
SSF57889 | UniProtKB/TrEMBL | |
UniProt | A0A8I5ZJG9_RAT | UniProtKB/TrEMBL |
A0A8I6A873 | ENTREZGENE, UniProtKB/TrEMBL | |
D3ZSZ6_RAT | UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2012-10-11 | Dgkh | diacylglycerol kinase, eta | RGD1561955 | similar to diacylglycerol kinase eta | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-04-30 | RGD1561955 | similar to diacylglycerol kinase eta | RGD1561955_predicted | similar to diacylglycerol kinase eta (predicted) | 'predicted' is removed | 2292626 | APPROVED |
2006-03-07 | RGD1561955_predicted | similar to diacylglycerol kinase eta (predicted) | LOC361076 | similar to diacylglycerol kinase eta | Symbol and Name status set to approved | 1299863 | APPROVED |
2006-02-09 | LOC361076 | similar to diacylglycerol kinase eta | Symbol and Name status set to provisional | 70820 | PROVISIONAL |