Niddm54 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Niddm54 (Non-insulin dependent diabetes mellitus QTL 54) Rattus norvegicus

Symbol: Niddm54
Name: Non-insulin dependent diabetes mellitus QTL 54
RGD ID: 724545
Previously known as: Nidd17/of
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: blood glucose level area under curve (AUC)   (CMO:0000350)    
LOD Score: Not Available
P Value: 0.02
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21550,794,494 - 73,699,215RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01557,528,970 - 81,263,988RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01561,238,603 - 84,802,960RGDRnor5.0
RGSC_v3.41556,346,569 - 80,370,658RGDRGSC3.4
RGSC_v3.11556,362,349 - 80,386,438RGD
Cross Type: intercross
Strains Crossed: F344/DuCrlCrlj OLETF/Got 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Identification of epistatic interactions involved in non-insulin-dependent diabetes mellitus in the Otsuka Long-Evans Tokushima Fatty rat. Yamada T, etal., Exp Anim 2001 Apr;50(2):115-23.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
69350Pcdh8protocadherin 8155519847555203021Rat
2079Akap11A-kinase anchoring protein 11155391163553956138Rat
619721Rgccregulator of cell cycle155466248354675320Rat
3850Tsc22d1TSC22 domain family, member 1155175048951850958Rat
620176Cnmdchondromodulin155504154855066297Rat
620772Gtf2f2general transcription factor IIF subunit 2155120602751327166Rat
620697Elf1E74 like ETS transcription factor 1155489064454986721Rat
620784Tnfsf11TNF superfamily member 11155367499053705171Rat
620033Wbp4WW domain binding protein 4155486270054890668Rat
621623Tpt1tumor protein, translationally-controlled 1155115672851159629Rat
1305086Kbtbd6kelch repeat and BTB domain containing 6155484828554850042Rat
1306118Enox1ecto-NOX disulfide-thiol exchanger 1155251783353079752Rat
1307452Klhl1kelch-like family member 1157269818873142707Rat
1306348Pcdh9protocadherin 9156934010870237531Rat
1306441Spertlspermatid associated like157246415772468708Rat
1304753Pcdh17protocadherin 17156022208860316172Rat
1307254Gpalpp1GPALPP motifs containing 1155141188351429435Rat
1304555Cog3component of oligomeric golgi complex 3155102080851071288Rat
1308772Vwa8von Willebrand factor A domain containing 8155425270354576871Rat
1306297Pcdh20protocadherin 20156442553464431790Rat
1311708Olfm4olfactomedin 4155538510055429687Rat
1310185Lacc1laccase domain containing 1155239026752407630Rat
1307550Sugt1SGT1 homolog, MIS12 kinetochore complex assembly cochaperone155499141955032244Rat
1307154Dnajc15DnaJ heat shock protein family (Hsp40) member C15155318206053249675Rat
1310126Tdrd3tudor domain containing 3156334053163497208Rat
1561955Dgkhdiacylglycerol kinase, eta155398107954150470Rat
1359702Slc25a30solute carrier family 25, member 30155107699851099613Rat
1561044Cby2chibby family member 2155090943551004449Rat
1560137Fam216bfamily with sequence similarity 216, member B155348924353496717Rat
1563207Epsti1epithelial stromal interaction 1155328396453382192Rat
1566076Serp2stress-associated endoplasmic reticulum protein family member 2155187988451903965Rat
1584329Mtrf1mitochondrial translation release factor 1155477688554804699Rat
1584320Rps24-ps14ribosomal protein S24, pseudogene 14155481614854816642Rat
1584324Naa16N(alpha)-acetyltransferase 16, NatA auxiliary subunit155471162054770915Rat
1359440Nufip1nuclear FMR1 interacting protein 1155142951851460308Rat
1564564LOC306079similar to RIKEN cDNA 3100001N19155552033255531842Rat
1592157Cyp2c6_v1-ps6cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1, pseudogene 6155684739456863597Rat
1592145Sinhcaf-ps1SIN3-HDAC complex associated factor, pseudogene 1157231631972318425Rat
1592146Ngrn-ps3neugrin, neurite outgrowth associated, pseudogene 3157145020371453611Rat
1592168Siah3siah E3 ubiquitin protein ligase family member 3155077096350834278Rat
1592167Gabarapl2-ps2GABA type A receptor associated protein like 2, pseudogene 2155098554950986428Rat
1592151Phgdh-ps4phosphoglycerate dehydrogenase, pseudogene 4156580583465807366Rat
1592156Sord-ps6sorbitol dehydrogenase, pseudogene 6155712815857129211Rat
1595676Vdac1-ps13voltage-dependent anion channel 1, pseudogene 13157047334670479101Rat
1595677Nono-ps9non-POU domain containing, octamer-binding, pseudogene 9156738764167435806Rat
1593287Diaph3diaphanous-related formin 3156254337563013060Rat
1592111LOC290428similar to small nuclear ribonucleoparticle-associated protein157319364773194285Rat
1592113Pkm-ps18pyruvate kinase M1/2, pseudogene 18156431995864321551Rat
1594637Kctd4potassium channel tetramerization domain containing 4155126366451278030Rat
1590791LOC498555similar to 60S acidic ribosomal protein P2156763836567638804Rat
1597679Calm2-ps2calmodulin 2, pseudogene 2155811060058111718Rat
2320118Mtfr2-ps1mitochondrial fission regulator 2, pseudogene 1156542691565427910Rat
2320163Mfap1a-ps2microfibrillar-associated protein 1A, pseudogene 2156327575063276346Rat
2319690Cdk4-ps1cyclin-dependent kinase 4, pseudogene 1156737104667371603Rat
2320681LOC10036118040S ribosomal protein S17-like155717842557179006Rat
2321506Ccdc122coiled-coil domain containing 122155240780652470050Rat
2321527LOC100360731SNRPN upstream reading frame protein-like157319322273193407Rat
2321672Akip1-ps1A-kinase interacting protein 1, pseudogene 1157257613772579688Rat
2325470Mir759microRNA 759155514202255142118Rat
6491099Erich6bglutamate-rich 6B155097906651014394Rat
6501695Kbtbd7kelch repeat and BTB domain containing 7155480687854811457Rat
6496491Rpsa-ps1ribosomal protein SA, pseudogene 1156394891363949900Rat
6501416Rpl15-ps1ribosomal protein L15, pseudogene 1155482252954823866Rat
6501536Glul-ps1glutamate-ammonia ligase, pseudogene 1155470241154704851Rat
7631267LOC102556319uncharacterized LOC102556319155191597951929359Rat
7651565LOC102546653uncharacterized LOC102546653156686439666876742Rat
7661800LOC102549816uncharacterized LOC102549816155386129753864972Rat
7552264LOC102547864uncharacterized LOC102547864156655133366593853Rat
7607858Afg3l1-ps1AFG3 (ATPase family gene 3)-like 1, pseudogene 1157251057272511658Rat
7554821Envl-ps1MLV-related proviral Env polyprotein-like, pseudogene 1156673717466757250Rat
7695025LOC102549099uncharacterized LOC102549099155117522651192638Rat
7699265LOC102552389uncharacterized LOC102552389155114431451149510Rat
7700048LOC102546462uncharacterized LOC102546462155217781152273499Rat
7672387LOC102554138uncharacterized LOC102554138155806456458084413Rat
9094045LOC103693719uncharacterized LOC103693719155201892052027569Rat
9173655Hmga1-ps3high mobility group AT-hook 1, pseudogene 3155146046051463125Rat
9142262LOC103693717uncharacterized LOC103693717155139785351408059Rat
9082307LOC103690313uncharacterized LOC103690313155135980051362026Rat
9205700LOC103693880uncharacterized LOC103693880156019854560221983Rat
9333309LOC103693748uncharacterized LOC103693748156458992964832650Rat
9466192LOC103693740cytochrome b-c1 complex subunit 7 pseudogene155875934358759666Rat
9417610LOC103693758uncharacterized LOC103693758157231848772385670Rat
9685073Mir1297microRNA 1297155684843056848503Rat
11434381LOC108352947uncharacterized LOC108352947155520341055274301Rat
11436659LOC108353006ATP synthase subunit d, mitochondrial pseudogene155721053057211782Rat
11436928LOC108352945uncharacterized LOC108352945155186004751862572Rat
11447237LOC108353040uncharacterized LOC108353040155423194754235599Rat
11450795Trnae-uuc7transfer RNA glutamic acid (anticodon UUC) 7155148538351485454Rat
11410099LOC108353042uncharacterized LOC108353042157086763970872983Rat
11379167LOC108352949uncharacterized LOC108352949156023615860255653Rat
11379973Trnae-uuc8transfer RNA glutamic acid (anticodon UUC) 8155489080954890880Rat
11391647LOC108352944uncharacterized LOC108352944155171709651730024Rat
11507603LOC108352946uncharacterized LOC108352946155210784852112526Rat
11484738LOC108352943uncharacterized LOC108352943155153676051563422Rat
41086981LOC120097308U6 spliceosomal RNA155884001758840119Rat
41112163Eif5b-ps2eukaryotic translation initiation factor 5B, pseudogene 2155414997054151117Rat
41087576Rps15-ps5ribosomal protein S15, pseudogene 5155262460752625235Rat
41204718LOC120097281U2 spliceosomal RNA156877186068772017Rat
41277989LOC120097120uncharacterized LOC120097120155426877054269387Rat
41381972Tubal-ps1tubulin, alpha like, pseudogene 1156407140364072451Rat
41169285Ran-ps6RAN, member RAS oncogene family, pseudogene 6155141578451416614Rat
41251075LOC120097271small nucleolar RNA SNORA17157083639770836536Rat
41285695LOC120097042uncharacterized LOC120097042155115955151169131Rat
41325790LOC120097252small nucleolar RNA SNORA17156655180666551936Rat
41326155LOC120097228small nucleolar RNA SNORA48156366873363668876Rat
41287184LOC120097257small nucleolar RNA SNORA17156867010768670234Rat
41096054LOC120093128uncharacterized LOC120093128156393710263941299Rat
41148120LOC120097109uncharacterized LOC120097109155156630551571272Rat
41176091LOC120097266small nucleolar RNA SNORA17157169596971696057Rat
41261712LOC120097292U6 spliceosomal RNA157300867373008779Rat
41262856LOC120097242small nucleolar RNA SNORA17155906759759067728Rat
41365783LOC120097247small nucleolar RNA SNORA17156575091865751049Rat
41121265LOC120097225small nucleolar RNA SNORA2/SNORA34 family157176224671762373Rat
41189376LOC120097230small nucleolar RNA SNORA48156305046163050601Rat
41154596LOC120097113uncharacterized LOC120097113155186311051868135Rat
41101550LOC120097117uncharacterized LOC120097117155295910952960850Rat
41398796LOC120097040uncharacterized LOC120097040155082147550844771Rat
41070333Snora31small nucleolar RNA, H/ACA box 31155115922051159349Rat
41127910Atp5mj-ps2ATP synthase membrane subunit j, pseudogene 2156320208063202497Rat
41348002LOC120097114uncharacterized LOC120097114155190418951909465Rat
41271476LOC120097313U1 spliceosomal RNA156228193762282097Rat
41164845LOC120097049uncharacterized LOC120097049155395618653960792Rat
41109740LOC120097047uncharacterized LOC120097047155149876151512101Rat
40975150LOC120097286small nucleolar RNA U3155954783759548029Rat
40957543LOC120097141uncharacterized LOC120097141156968199469719442Rat
41000723LOC120097121uncharacterized LOC120097121155428709854296675Rat
40931825LOC120097110uncharacterized LOC120097110155154480951545331Rat
40958512LOC120097052uncharacterized LOC120097052155889457659015688Rat
41002785Trnav-aac40transfer RNA valine (anticodon AAC) 40156270754162707622Rat
41003131Hars1-ps1histidyl-tRNA synthetase 1, pseudogene 1155440661954416048Rat
40959529LOC120097187uncharacterized LOC120097187156649888566520540Rat
40983884LOC120097054uncharacterized LOC120097054156665172066661831Rat
40986166Trnap-ugg7transfer RNA proline (anticodon UGG) 7155272918152729261Rat
40964313LOC120097044uncharacterized LOC120097044155135805951361504Rat
40989554LOC120097194U6 spliceosomal RNA156219208462192173Rat
40939906LOC120097116uncharacterized LOC120097116155283995052863424Rat
40992298LOC12009704340S ribosomal protein S29-like155119379451199210Rat
40942556LOC120097218small nucleolar RNA SNORA5155128408451284223Rat
40995928LOC120097056uncharacterized LOC120097056156786285767953489Rat
40996552LOC120097046uncharacterized LOC120097046155140780651408246Rat
41311605LOC120097184uncharacterized LOC120097184155567877955691531Rat
41023963Snrk-ps1SNF related kinase, pseudogene 1157078688370789325Rat
41026458LOC120097310U6 spliceosomal RNA156374503163745137Rat
41027949LOC120097302U1 spliceosomal RNA156946362569463786Rat
41051620LOC120097140uncharacterized LOC120097140156950797869538198Rat
41079966LOC120097254small nucleolar RNA SNORA17156728878167288910Rat
41080237Tmem167a-ps1transmembrane protein 167A, pseudogene 1155894679058952210Rat
41029888LOC120097048uncharacterized LOC120097048155249305052501340Rat
41054013LOC120097265small nucleolar RNA SNORA17157166663371666721Rat
41257981LOC120097142uncharacterized LOC120097142156999016870006898Rat
41059337LOC120097108uncharacterized LOC120097108155154586951566802Rat
41315464LOC120097053uncharacterized LOC120097053156138063461394655Rat
41033512LOC120097256U2 spliceosomal RNA155477002654770188Rat
41059573LOC120097112uncharacterized LOC120097112155180841851822530Rat
41300597LOC120097055uncharacterized LOC120097055156664332566653880Rat
41226654LOC120097232small nucleolar RNA SNORA17156651097266511103Rat
41018907LOC120097188uncharacterized LOC120097188156747758567491791Rat
41042581LOC120097041uncharacterized LOC120097041155095973950975200Rat
41309137Rps29-ps6ribosomal protein S29, pseudogene 6155167644851680099Rat
41023740LOC120097057uncharacterized LOC120097057156848083468606048Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34094D15Mit8150155339471153394861Ratregion
34222D15Mgh8139157369051873690657Ratregion
34471D15Mgh3149155559495855596089Ratregion
34471D15Mgh3149155559593955596089Ratregion
37276D15Rat68132155648442056484560Ratregion
35230D15Rat22164157369906973699215Ratregion
35362D15Rat19170155079449450794652Ratregion
35455D15Rat20151155281302852813179Ratregion
37620D15Rat74176155260878152608962Ratregion
37696D15Rat59208155796459157964817Ratregion
37794D15Rat48200155530190755302115Ratregion
37918D15Rat39236155531575355315995Ratregion
36663D15Rat21159156832716568327360Ratregion
40554D15Rat93173155655405456554225Ratregion
39192D15Rat47200156644312766443335Ratregion
39458D15Rat95209156318067563180884Ratregion
39524D15Rat98146157369906973699205Ratregion
41926D15Rat37160155365631153656471Ratregion
42006D15Arb2219156099046860990698Ratregion
41332D15Rat94171156962579369625966Ratregion
43051D15Rat146205155081975550819957Ratregion
43052D15Rat148114155122942151229521Ratregion
42406D15Rat165125155317701353177138Ratregion
40882D15Rat97224157147706771477291Ratregion
41010D15Rat96157156520576265205939Ratregion
41636D15Rat123133155284790852848045Ratregion
41708D15Rat125135156272548662725621Ratregion
44552D9Wox21136156641797866418033Ratregion
45595D18Got3281157126847471270091Ratregion
60117D15Got70156155545954655459704Ratregion
60118D15Got73139155492565854925797Ratregion
45273D15Got111135155702911457029249Ratregion
45274D15Got72205155959517159595382Ratregion
45275D15Got60197155080401550804211Ratregion
625835D15Got115200155280070052800900Ratregion
60108D15Got61246155257993952580185Ratregion
60109D15Got62210155185289351853103Ratregion
60111D15Got64164155316034553160509Ratregion
60112D15Got65107155442203854422145Ratregion
60113D15Got66176155401940354019579Ratregion
60114D15Got67122155388807053888192Ratregion
60115D15Got68279155516674955167027Ratregion
60116D15Got69210155572901155729221Ratregion
62451D15Uia4178155554945555549633Ratregion
66545D15Mco15168155656425156564417Ratregion
1630632D15Got219138155361083053610968Ratregion
1631578D15Got231171156646680366466974Ratregion
1631763D15Got206123155495323354953351Ratregion
1631898D15Got228144157237680472376943Ratregion
1627753D15Got212172156794251067942682Ratregion
1628345D15Got233178156373476563734943Ratregion
1628726D15Got209163156669903966699202Ratregion
1629296D15Got210117156644314366443260Ratregion
1629889D15Got22296156409889464098985Ratregion
1640782D15Got243144156251061362510752Ratregion
1641695D15Got247188156205529562055483Ratregion
1635017D15Got225267156259464162594908Ratregion
1635632D15Got21177156954542869545505Ratregion
1637264D15Got208263156638915366389411Ratregion
1633890D15Got204145155492847454928621Ratregion
1634050D15Got213116157196046571960581Ratregion
7192222D15Mgh3149155559495755596089Ratregion
7192222D15Mgh3149155559593855596089Ratregion
5038840RH127363186155471277554713464Ratregion
5038878RH127385200157145368971453882Ratregion
7206534UniSTS:546922999156934024769341246Ratregion
7206748ha24360156538923565389920Ratregion
5036279Egr5-rs191155185044751850638Ratregion
5036336Hars129155441532054415449Ratregion
5039102RH127513215156763852467638739Ratregion
5039102RH127513215156763852467638739Ratregion
5036573AU048473163155616290656162948Ratregion
5036887AU049518237155463547254635711Ratregion
5037005AU049892298156862226168622559Ratregion
5035649RH45841138156934041069340548Ratregion
5031670AU047541219156620524666205458Ratregion
5031696AU047454131156734444167344572Ratregion
5029099RH143518275155441406454414339Ratregion
5029293RH144249100155127786851277968Ratregion
5029707BE096152169155240633152406500Ratregion
5029729BE102165149156989884869898997Ratregion
5032627RH134704217155457655254576824Ratregion
5027479AW31965586155107827451078360Ratregion
5033015RH137283212156254343062543642Ratregion
5025812RH129773152155445338854453540Ratregion
5051146RH134466180155140937251409551Ratregion
5056421RH144368156155480440854804564Ratregion
5051549U1961767155498595454986021Ratregion
5056763RH144566166155338197153382137Ratregion
5057388AA89300295155398107553981170Ratregion
5055049RH143576113155487727754877390Ratregion
5059692BE097649184155202716752027516Ratregion
5056457RH144389146155398950553989651Ratregion
505221542.MMHAP38FLF6.seq182155519900555199187Ratregion
5058064BF386528161155266616252666323Ratregion
5056757RH144562156156442641364426569Ratregion
5058976BE102662172156970588969706061Ratregion
5059830BE103347183155486422954864412Ratregion
5059960BF388234157156021385460214011Ratregion
5059976BF388284152155266521052665362Ratregion
5058400AI05870790155239029752390387Ratregion
5059068BF387401151155256060252560753Ratregion
5051090RH134434208155486286454863072Ratregion
5054137RH143051156155398671353986869Ratregion
5053325RH142583272156826804168268313Ratregion
5051547AI596460106155090954250909648Ratregion
5054597RH143315121155467522054675341Ratregion
5044734RH130773214155187992351880137Ratregion
5043800RH130235184155107874051078924Ratregion
5044378RH130568208155441559254415947Ratregion
5045590RH131265195155107703751077232Ratregion
5047642RH132445212155185061551850827Ratregion
5048844RH133138216155141195051412166Ratregion
5049366RH133440183155120622851206411Ratregion
5048182RH132755201155177610051776301Ratregion
5048188RH132759180156344601163446191Ratregion
5042076RH129225212156763852867638740Ratregion
5042076RH129225212156763852867638740Ratregion
5048638RH133019182155290842452908606Ratregion
5043022RH129784185155498473354984918Ratregion
5041340RH128801183155283960052839783Ratregion
5072828RH137077180155396051853960698Ratregion
5072758RH137036189155146009051460279Ratregion
5075270RH138497150155107833351078483Ratregion
5075530RH138647216155498621754986433Ratregion
5080566RH141654204155115976251159965Ratregion
5077262RH139655220155481122554811445Ratregion
5076044RH138946237155120515051205387Ratregion
5075074RH138383181155391434653914527Ratregion
5077580RH139838210155318285153183061Ratregion
5077600RH139849215155471164254711857Ratregion
5070812RH134720220155391178653912006Ratregion
5073714RH137596129155083791850838047Ratregion
5073794RH137642174155118957051189744Ratregion
5073160RH137274153155101954051019693Ratregion
5072094RH136647184156031344560313630Ratregion
5074298RH137936146157021274870212894Ratregion
5074568RH138092198156349629463496492Ratregion
5061816AI709754148155318218853182336Ratregion
5066762AU048166198155432442954324627Ratregion
5067952AU047438132155992864759928776Ratregion
5063980BE120363210155346783153468041Ratregion
5065504BE109148206155398713353987340Ratregion
5062694BF403868167155139800851398175Ratregion
5064352BI302068215156133510161335316Ratregion
5061980BF397056150155251626052516410Ratregion
5064868BE108656150156442551864425668Ratregion
5061600BF402156130155140591351406043Ratregion
5086903AI412797163155320392653204089Ratregion
5082443BE119407152156342617063426322Ratregion
5087452PMC18246P2242155811144958111691Ratregion
5089143AU048980150157338924573389395Ratregion
5089715AU049320261155492848054928743Ratregion
5082415BE119345209155295913752959346Ratregion
5088447AU048574199156876430068764499Ratregion
5088543AU048632239155957986159580084Ratregion
5085137BQ200206214156356020363560417Ratregion
5085337BE110031209155399208253992291Ratregion
5090511AU049794215157261218272612397Ratregion
5089027AU048911125157237684172376966Ratregion
5085998AW535983150155431435254314502Ratregion
5082941BF390452155155425416154254316Ratregion
5083019BF390670197156991371269913909Ratregion
5085609BQ201795220155481122554811445Ratregion
5083671BF418003121155288460252884723Ratregion
5086711BM386690213155557699155577204Ratregion
5503218UniSTS:237232198156254346062543658Ratregion
5504036px-39f10692156719200967192701Ratregion
5504066px-59g3108156430592064306028Ratregion
5506785G45372202156222617862226380Ratregion
5500873D8S18071641157324127173242912Ratregion
5502196MARC_8253-8254:996688461:1385155143302051433420Ratregion
5502774LOC144997109156031399760314106Ratregion
Position Markers

Flank 1: (D15Rat19)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21550,794,494 - 50,794,652 (+)MAPPER
Rnor_6.01557,528,970 - 57,529,125NCBI
Rnor_5.01561,238,603 - 61,238,758UniSTS
RGSC_v3.41556,346,569 - 56,346,725RGD
RGSC_v3.41556,346,570 - 56,346,725UniSTS
RGSC_v3.11556,362,349 - 56,362,505RGD
Celera1550,425,266 - 50,425,421UniSTS
SHRSP x BN Map1534.6299UniSTS
SHRSP x BN Map1534.6299RGD
FHH x ACI Map1547.47RGD
Cytogenetic Map15q11UniSTS
Flank 2: (D15Rat22)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21573,699,069 - 73,699,215 (+)MAPPER
Rnor_6.01581,263,843 - 81,263,988NCBI
Rnor_5.01584,802,815 - 84,802,960UniSTS
RGSC_v3.41580,370,512 - 80,370,658RGD
RGSC_v3.41580,370,513 - 80,370,658UniSTS
RGSC_v3.11580,386,293 - 80,386,438RGD
Celera1572,968,417 - 72,968,562UniSTS
RH 3.4 Map15521.0UniSTS
RH 3.4 Map15521.0RGD
RH 2.0 Map15385.2RGD
SHRSP x BN Map1543.6598RGD
Cytogenetic Map15 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
2293691Bmd37Bone mineral density QTL 376.60.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)153361105871477291Rat
2293686Bmd36Bone mineral density QTL 367.40.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)153361105871477291Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)153405413979054139Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)154063126898288169Rat
724545Niddm54Non-insulin dependent diabetes mellitus QTL 540.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)155079449473699215Rat
2317050Aia24Adjuvant induced arthritis QTL 242.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)155284790873690657Rat
1576315Schws6Schwannoma susceptibility QTL 60.0069nervous system integrity trait (VT:0010566)post-insult time of death (CMO:0002005)155380615298806152Rat
61477Aia4Adjuvant induced arthritis QTL 43joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)155559608991365858Rat
631516Gluco31Glucose level QTL 317blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)155559608995018120Rat
631655Bp126Blood pressure QTL 1264arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1558156477101769107Rat
2313080Bss65Bone structure and strength QTL 653.90.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)156099046873690657Rat
731177Uae26Urinary albumin excretion QTL 262.40.025urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1567588667101769107Rat
2300326Plaw1Placental weight QTL 1150.005placenta mass (VT:0004257)placenta wet weight (CMO:0002088)1568327165100062518Rat
724548Niddm55Non-insulin dependent diabetes mellitus QTL 550.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)156832736073699069Rat
1331724Bp223Blood pressure QTL 2233.53715arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)157369051895018228Rat
1641889Colcr6Colorectal carcinoma resistance QTL 62.90.0126intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)157369051899794247Rat
70182BpQTLcluster12Blood pressure QTL cluster 123.53arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)157369065795018120Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Niddm54

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general markers are 17.1 cM apart; have epistatic interaction with Niddm 52 619670