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Gene: Gipc2 (GIPC PDZ domain containing family, member 2) Rattus norvegicus
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Symbol: Gipc2
Name: GIPC PDZ domain containing family, member 2
Description: Predicted to have identical protein binding activity. Predicted to localize to the cytoplasm. Orthologous to human GIPC2 (GIPC PDZ domain containing family member 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC100361187; LOC365960; MGC116274; PDZ domain-containing protein GIPC2; semaF cytoplasmic domain associated protein 2; similar to semaF cytoplasmic domain associated protein 2
Orthologs:
Homo sapiens (human) : GIPC2 (GIPC PDZ domain containing family member 2)  HGNC  Alliance
Mus musculus (house mouse) : Gipc2 (GIPC PDZ domain containing family, member 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gipc2 (GIPC PDZ domain containing family member 2)
Pan paniscus (bonobo/pygmy chimpanzee) : GIPC2 (GIPC PDZ domain containing family member 2)
Canis lupus familiaris (dog) : GIPC2 (GIPC PDZ domain containing family member 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gipc2 (GIPC PDZ domain containing family member 2)
Sus scrofa (pig) : GIPC2 (GIPC PDZ domain containing family member 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02257,293,161 - 257,377,982 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2257,293,167 - 257,376,756 (-)Ensembl
Rnor_5.02275,974,237 - 276,052,941 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42250,704,151 - 250,733,988 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2232,967,285 - 233,044,841 (-)NCBICelera
Cytogenetic Map2q45NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Gipc2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560751
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.