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Gene: RGD1560065 (similar to RIKEN cDNA 2410004B18) Rattus norvegicus
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Symbol: RGD1560065
Name: similar to RIKEN cDNA 2410004B18
RGD ID: 1560065
Description: Predicted to localize to nucleoplasm. Orthologous to human C1orf52 (chromosome 1 open reading frame 52); INTERACTS WITH bisphenol A; furan; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: hypothetical protein LOC499724; LOC499724; uncharacterized protein LOC499724; UPF0690 protein C1orf52 homolog
Orthologs:
Homo sapiens (human) : C1orf52 (chromosome 1 open reading frame 52)  HGNC  Alliance
Mus musculus (house mouse) : 2410004B18Rik (RIKEN cDNA 2410004B18 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102025376 (chromosome unknown open reading frame, human C1orf52)
Pan paniscus (bonobo/pygmy chimpanzee) : C1H1orf52 (chromosome 1 C1orf52 homolog)
Canis lupus familiaris (dog) : C6H1orf52 (chromosome 6 C1orf52 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH1orf52 (chromosome unknown C1orf52 homolog)
Sus scrofa (pig) : C4H1orf52 (chromosome 4 C1orf52 homolog)
Chlorocebus sabaeus (African green monkey) : C20H1orf52 (chromosome 20 open reading frame, human C1orf52)
Heterocephalus glaber (naked mole-rat) : CUNH1orf52 (chromosome unknown C1orf52 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02251,817,862 - 251,824,784 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2251,817,694 - 251,824,784 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02270,342,994 - 270,349,932 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42244,129,298 - 244,135,911 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2226,835,470 - 226,841,562 (+)NCBICelera
Cytogenetic Map2q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on RGD1560065
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560065
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.