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Gene: Spopfm2l1 (speckle-type BTB/POZ protein family member 2 like 1) Rattus norvegicus

Analyze

No known orthologs.

Symbol:

Spopfm2l1

Name:

speckle-type BTB/POZ protein family member 2 like 1

RGD ID:

1559714

Description:

Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and regulation of proteolysis. Predicted to be active in cytoplasm and nucleus; INTERACTS WITH atrazine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC502570; LOC689173; RGD1559714; RTDPOZ-T1; similar to TD and POZ domain containing 2; similar to TDPOZ3; TD and POZ domain-containing protein 5-like; Tdpoz; Tdpoz-T1; TDPOZ-T2-like; TRAF domain and POZ/BTB containing protein T1

RGD Orthologs

Alliance Orthologs

More Info

homologs ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	184,526,166 - 184,540,589 (-)	NCBI		GRCr8
mRatBN7.2	2	181,837,102 - 181,851,529 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	181,837,105 - 181,953,508 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	189,462,301 - 189,469,674 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	187,301,916 - 187,309,289 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	182,106,300 - 182,113,673 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	195,277,647 - 195,279,177 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	195,277,647 - 195,279,218 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	210,582,112 - 210,588,374 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	2	214,758,510 - 214,760,040 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	189,118,354 - 189,119,883 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Cytogenetic Map	2	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

atrazine (EXP)

bisphenol A (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

proteasome-mediated ubiquitin-dependent protein catabolic process (IBA)

regulation of proteolysis (IBA)

Cellular Component

cytoplasm (IBA)

nucleus (IBA)

Molecular Function

ubiquitin protein ligase binding (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:17071022	PMID:19630990

Genomics

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	242
Count of miRNA genes:	173
Interacting mature miRNAs:	187
Transcripts:	ENSRNOT00000048323
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358356	Srcrt1	Stress Responsive Cort QTL1	3.66		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	2	163997722	225110681	Rat
1578648	Bss11	Bone structure and strength QTL 11	4.7		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	2	169358774	214358774	Rat
1331734	Bp204	Blood pressure QTL 204	3.61192		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	170656145	239614549	Rat
631566	Bp90	Blood pressure QTL 90		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	149957381	221199885	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845370	229470703	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	83465462	229820014	Rat
1298076	Bp166	Blood pressure QTL 166		0.0009	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	138595962	205135428	Rat
1581576	Pur7	Proteinuria QTL 7		0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	80396178	220931218	Rat
1581578	Cm49	Cardiac mass QTL 49	4.9	0.01	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	145807215	220931416	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	78269809	208420281	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	0.0001	lumbar vertebra area (VT:0010570)	lumbar vertebra cross-sectional area (CMO:0001689)	2	122597372	215234002	Rat
12879836	Kidm61	Kidney mass QTL 61		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	154723085	199723085	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	80396178	220931218	Rat
10043136	Iddm54	Insulin dependent diabetes mellitus QTL 54	3.4	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	145807215	190807215	Rat
12879837	Am2	Aortic mass QTL 2		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	2	154723085	199723085	Rat
10043139	Iddm55	Insulin dependent diabetes mellitus QTL 55	3.1	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	150313808	195313808	Rat
12879838	Cm86	Cardiac mass QTL 86		0.002	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	154723085	199723085	Rat
1302793	Bw16	Body weight QTL 16	5	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	2	159440891	205135267	Rat
12879839	Cm85	Cardiac mass QTL 85		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	2	154723085	199723085	Rat
1549833	Bp257	Blood pressure QTL 257		0.003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	170652929	215652929	Rat
1358900	Bw48	Body weight QTL 48	4.88		body mass (VT:0001259)	body weight (CMO:0000012)	2	159440891	220931218	Rat
4889834	Pur24	Proteinuria QTL 24	5.8	0.014	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	171994826	205135428	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	143565208	188565208	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	4265106	205135428	Rat
12879840	Bw179	Body weight QTL 179		0.005	body mass (VT:0001259)	body weight (CMO:0000012)	2	154723085	199723085	Rat
1581502	Esta3	Estrogen-induced thymic atrophy QTL 3			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	2	139067258	192287892	Rat
1359032	Hrtrt18	Heart rate QTL 18			heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	2	159440760	195313808	Rat
2301966	Bp322	Blood pressure QTL 322	3.58		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	144882354	205135428	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845182	205135428	Rat
1357991	Ael2	Aortic elastin QTL 2	4.2	0.000071	aorta elastin amount (VT:0003905)	aortic elastin	2	169227906	214227906	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	83400752	223709938	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
1578671	Bmd10	Bone mineral density QTL 10	5.4		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	2	175931416	220931416	Rat
1641891	Alcrsp17	Alcohol response QTL 17			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	151869660	251712708	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	80396034	220931416	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	78269809	205135428	Rat
2300189	Bmd48	Bone mineral density QTL 48	5.8	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	182024327	227024327	Rat
8662843	Vetf9	Vascular elastic tissue fragility QTL 9	2.05		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	159440760	228950743	Rat
2301408	Kidm36	Kidney mass QTL 36		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	184482291	229482291	Rat
1331794	Bp202	Blood pressure QTL 202	3.66819		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	143344967	251712708	Rat
71113	Cari2	Carrageenan-induced inflammation QTL 2	2.7	0.009	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	2	143746578	205135428	Rat
1331805	Cm29	Cardiac mass QTL 29	3.50746		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	2	143344967	251712708	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	114384617	215381366	Rat
1598805	Memor8	Memory QTL 8	3		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	2	150096616	195096616	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
724568	Uae13	Urinary albumin excretion QTL 13	4.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	2	145306936	212705578	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
1300165	Rf9	Renal function QTL 9	3.28		kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	2	113746222	205135428	Rat
61401	Niddm2	Non-insulin dependent diabetes mellitus QTL 2	4.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	147287892	192287892	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	114384617	215381366	Rat
1641925	Alcrsp2	Alcohol response QTL 2			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	151869660	223841096	Rat
1354609	Niddm62	Non-insulin dependent diabetes mellitus QTL 62	4.72	0.000006	insulin secretion trait (VT:0003564)	plasma insulin level (CMO:0000342)	2	117415288	205135428	Rat
1598833	Bp295	Blood pressure QTL 295	3.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	150096616	195096616	Rat
61417	Cia10	Collagen induced arthritis QTL 10	3.4		joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	2	182635347	227635347	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	83465462	225110681	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	47856345	205135428	Rat
631522	Bp74	Blood pressure QTL 74		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	175008837	220008837	Rat
7488927	Bp365	Blood pressure QTL 365		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	165453811	210453811	Rat
7488925	Bp364	Blood pressure QTL 364		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	163253030	208253030	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	44537979	184731399	Rat
2306901	Bp337	Blood pressure QTL 337		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	166372086	229820014	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	76328396	209350714	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
8	3	12	34	53	54	24	21	24	4	103	45	18	23	53	30

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001100996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY902366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FJ004893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000085020 ⟹ ENSRNOP00000071619

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	9	117,439,148 - 117,439,951 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085565 ⟹ ENSRNOP00000069505

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	2	195,277,647 - 195,279,218 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096330 ⟹ ENSRNOP00000093939

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	181,837,105 - 181,852,192 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112900 ⟹ ENSRNOP00000081908

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	181,837,105 - 181,953,508 (-)	Ensembl

RefSeq Acc Id:

NM_001100996 ⟹ NP_001094466

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,526,166 - 184,540,589 (-)	NCBI
mRatBN7.2	2	181,837,102 - 181,851,529 (-)	NCBI
Rnor_6.0	2	195,277,647 - 195,279,177 (-)	NCBI
Rnor_5.0	2	210,582,112 - 210,588,374 (+)	NCBI
Rnor_5.0	2	214,758,510 - 214,760,040 (-)	NCBI
RGSC_v3.4	2	189,118,354 - 189,119,883 (-)	RGD

Sequence:

show sequence

GACCAACAGAGCAAGCACTGCAGTTCCAAGTCTGAAGAGGTCAGAACTCACCTGAAGAGTATGC
AGACTATGAGAACATAGAGCCAGTTCACTTAGAGACTCTGGATAGAAAAAAACACACCTTTAAT
CTGATTCCTGTGTCAGGAAATTACACACCTTTAATCCCGATTTTGAGACCAGAAGACTGGGCCA
CACCTTCTGCTGGAGGTCTATATAAGCTCATGGAAGAAGGAAGCTTTGTATCTTTGCCTGCTTG
CTTTCATCTTACTAGCAAGCCCATTTTTCATAGGCGTTAGAGCCCACTTCTTCAGAATTCCAGC
ATATACTGAAGAACGTGAACACCACAGACTTCAAACCTTGTGGACTAAATCAACTTTAACCTCC
AAACTACCTCCAGAAGACATGTCAAGGGACCTGGAAGTCAAGAGCTGTGGCTACATACACATCA
GTGTTCAGAATTTCTGCTATGAGTGGGCCATTAGAAACTTTTCATTTTGCATGGATGGAATTCG
GGAAAATATTACAAGCCCAGGGTTCTCATTAGAGGCCAGTGAAGAAGTACAATGGTGTTTGACA
ATATACCCAAATGGTGTTGATGAAGAAAGCACAGATTACCTGTCTGTTTACCTGGGTTTGCTCA
GTTGTCCAAAGAGCCCAGTTTGGGCAAAGGTACAGTTCTGGATCATAAATGCCCAAGGAGAGAA
ATATGTTATTACAAAGATCTCAGATGTTTTAAGGTTTCTGCCAAATCGATACTGGGGATGCAAA
AATTTCATCCTTCGAGATTTCCTCCTTTACCATAGTCATTGGCTTCTCCCTGAAGACAAGCTTA
CCCTGTGTTGCAAGGTGAGCATAATAGGACCCTACTTTAGCAGGCCTGGACAGAACATGCCACC
TGCAATCAGGGATCCAATGCAAATATTGGCAGAAGACCTAGGAGAGCTGTGGGAAAATTCCCTC
TTCACAGACTGCAGCCTGGTGGTAGCTGGCCAGGAAATCAGATCTCACAAGGCCATTCTAGCAG
CTCGCTCTCCAGTTTTCAGAGCCATGTTTGAACATGAAATGCTAGATAGCTTAAGAAACCGCAT
TGAGATCCATGACATTCATCTGCAAGTCTTTAAGGAAATGATGCATTTCATTTACACAGGGACG
GTACCACACCTCCACAACCGCTCAATGGCCACTGGTTTGTTGGCAGCTGCTGATTAGTATGCCC
TGCAGGGCTTGAAGGTCATGTGTGAGGATGCCCTGTTCAGCAACATCTCTGTGAAAAATGCTGT
ACCCACTCTCATCCTGGCTGACCTCCACAGAGCAGAGAACCTGAAGACTAAAGCTATGGATTTC
ATTATACTTCATGTTTCTGAAGTCTCTGATACCGTGGGGTGGAAGTCAATGGTGGAGTCACATC
CCTACTTGGTGGAGGAAACATTTCACTCCCTGGCTTCTATACATTGTCCTTGCTTGGAGCCCTC
ACTCAAATGCTGAAAGATATTTTAGGAGCTTGACAGCTATGACCTACACCTGTCTTCCAACAGC
AACAACCACTCATTTTACCAATGACTTCTGTTTAGACTACAGTATTGCTGGAGCATTTACAGTG
AATCTGGGCAAAGGCAGCCTGGATTTACAAGAGCTGTAATATGTCAAAATGGTGTGTGGGGAAA
GGGCAGCACTAGGGTCTTGGACACTCTACGGGATATCTACCCTGCTGATGTTTTATTCTTGTCT
GATGTCTTGAACCTGGGATTCAACTGGCCTGAAACACAGCTCAACTGACTCTTTGGAAAAACCT
GTCTGCATTATACTGAGCAGAACAGATGACCTAACTTAACTGGCATGTAAAAATTTTCACCTAA
TTTATGTGTATTATATATCTGCAAATAAAAATCTTTCAACCT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001094466	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAX86990	(Get FASTA)	NCBI Sequence Viewer
	ACH91368	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000081908.1
	ENSRNOP00000093939.1

RefSeq Acc Id:

NP_001094466 ⟸ NM_001100996

- UniProtKB:

A1KZS2 (UniProtKB/TrEMBL), B5TQV6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSRDLEVKSCGYIHISVQNFCYEWAIRNFSFCMDGIRENITSPGFSLEASEEVQWCLTIYPNGV
DEESTDYLSVYLGLLSCPKSPVWAKVQFWIINAQGEKYVITKISDVLRFLPNRYWGCKNFILRD
FLLYHSHWLLPEDKLTLCCKVSIIGPYFSRPGQNMPPAIRDPMQILAEDLGELWENSLFTDCSL
VVAGQEIRSHKAILAARSPVFRAMFEHEMLDSLRNRIEIHDIHLQVFKEMMHFIYTGTVPHLHN
RSMATGLLAAAD

hide sequence

Ensembl Acc Id:

ENSRNOP00000069505 ⟸ ENSRNOT00000085565

Ensembl Acc Id:

ENSRNOP00000071619 ⟸ ENSRNOT00000085020

Ensembl Acc Id:

ENSRNOP00000081908 ⟸ ENSRNOT00000112900

Ensembl Acc Id:

ENSRNOP00000093939 ⟸ ENSRNOT00000096330

Protein Domains

BTB MATH

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K0X7-F1-model_v2	AlphaFold	A0A0G2K0X7	1-268	view protein structure
AF-A0A0G2JVJ2-F1-model_v2	AlphaFold	A0A0G2JVJ2	1-269	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1559714	AgrOrtholog
BioCyc Gene	G2FUF-52173	BioCyc
Ensembl Genes	ENSRNOG00000059493	Ensembl
	ENSRNOG00000061251	Ensembl
	ENSRNOG00000071200	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000096330.1	UniProtKB/TrEMBL
	ENSRNOT00000112900.1	UniProtKB/TrEMBL
InterPro	BTB/POZ-like	UniProtKB/TrEMBL
	BTB/POZ_fold	UniProtKB/TrEMBL
	MATH	UniProtKB/TrEMBL
	TRAF-like	UniProtKB/TrEMBL
KEGG Report	rno:502570	UniProtKB/TrEMBL
NCBI Gene	502570	ENTREZGENE
PANTHER	SPECKLE-TYPE BTB/POZ PROTEIN FAMILY MEMBER 1-RELATED	UniProtKB/TrEMBL
	SPECKLE-TYPE POZ PROTEIN	UniProtKB/TrEMBL
Pfam	BTB	UniProtKB/TrEMBL
	MATH_2	UniProtKB/TrEMBL
PhenoGen	Spopfm2l1	PhenoGen
PROSITE	BTB	UniProtKB/TrEMBL
	MATH	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000059493	RatGTEx
	ENSRNOG00000061251	RatGTEx
	ENSRNOG00000071200	RatGTEx
SMART	BTB	UniProtKB/TrEMBL
	MATH	UniProtKB/TrEMBL
Superfamily-SCOP	BTB/POZ_fold	UniProtKB/TrEMBL
	TRAF domain-like	UniProtKB/TrEMBL
UniProt	A1KZS2	ENTREZGENE, UniProtKB/TrEMBL
	B5TQV6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-06-28	Spopfm2l1	speckle-type BTB/POZ protein family member 2 like 1	RGD1559714	similar to TDPOZ3	Name and Symbol changed	629549	APPROVED
2021-03-09	RGD1559714	similar to TDPOZ3	LOC689173	similar to TD and POZ domain containing 2	Data merged from RGD:1596131	737654	PROVISIONAL
2013-05-24	RGD1559714	similar to TDPOZ3	LOC100363049	TDPOZ-T2-like	Data merged from RGD:2324840	1643240	APPROVED
2010-05-12	LOC100363049	TDPOZ-T2-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-04-30	RGD1559714	similar to TDPOZ3	RGD1559714_predicted	similar to TDPOZ3 (predicted)	'predicted' is removed	2292626	APPROVED
2006-11-20	LOC689173	similar to TD and POZ domain containing 2			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-03-07	RGD1559714_predicted	similar to TDPOZ3 (predicted)	LOC502570	similar to TDPOZ3	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC502570	similar to TDPOZ3			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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