Ints1 (integrator complex subunit 1) - Rat Genome Database

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Gene: Ints1 (integrator complex subunit 1) Mus musculus
Analyze
Symbol: Ints1
Name: integrator complex subunit 1
RGD ID: 1558510
MGI Page MGI
Description: Acts upstream of or within several processes, including U2 snRNA 3'-end processing; inner cell mass cell proliferation; and negative regulation of cysteine-type endopeptidase activity involved in apoptotic process. Located in nucleus. Is expressed in early conceptus. Human ortholog(s) of this gene implicated in neurodevelopmental disorder with cataracts, poor growth, and dysmorphic facies. Orthologous to human INTS1 (integrator complex subunit 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110015K06Rik; int1; KIAA1440
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395139,737,037 - 139,761,455 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5139,737,037 - 139,761,429 (-)EnsemblGRCm39 Ensembl
GRCm385139,751,282 - 139,775,702 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5139,751,282 - 139,775,674 (-)EnsemblGRCm38mm10GRCm38
MGSCv375140,227,236 - 140,251,632 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365140,003,757 - 140,028,127 (-)NCBIMGSCv36mm8
Celera5136,806,422 - 136,830,799 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map578.8NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
integrator complex  (IBA,IEA,ISO)
nuclear membrane  (IEA)
nucleus  (IDA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:16807365   PMID:17544522   PMID:20562862   PMID:21873635   PMID:23892456   PMID:24457600   PMID:26206133   PMID:28378742   PMID:30550785   PMID:31138677   PMID:32325033  


Genomics

Comparative Map Data
Ints1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395139,737,037 - 139,761,455 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5139,737,037 - 139,761,429 (-)EnsemblGRCm39 Ensembl
GRCm385139,751,282 - 139,775,702 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5139,751,282 - 139,775,674 (-)EnsemblGRCm38mm10GRCm38
MGSCv375140,227,236 - 140,251,632 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365140,003,757 - 140,028,127 (-)NCBIMGSCv36mm8
Celera5136,806,422 - 136,830,799 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map578.8NCBI
INTS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3871,470,277 - 1,504,389 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl71,470,277 - 1,504,389 (-)EnsemblGRCh38hg38GRCh38
GRCh3771,509,913 - 1,544,025 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3671,476,439 - 1,513,199 (-)NCBINCBI36Build 36hg18NCBI36
Celera71,477,287 - 1,511,447 (-)NCBICelera
Cytogenetic Map7p22.3NCBI
HuRef71,430,650 - 1,464,808 (-)NCBIHuRef
CHM1_171,509,565 - 1,543,671 (-)NCBICHM1_1
T2T-CHM13v2.071,582,409 - 1,619,912 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v271,562,263 - 1,596,426 (-)NCBI
Ints1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81219,975,166 - 19,999,893 (+)NCBIGRCr8
mRatBN7.21214,861,312 - 14,886,048 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1214,861,318 - 14,886,037 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01216,950,704 - 16,974,896 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1218,074,033 - 18,082,197 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01218,941,392 - 18,965,564 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01220,063,577 - 20,071,720 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41215,339,114 - 15,364,370 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11215,353,150 - 15,394,295 (+)NCBI
Celera1216,620,196 - 16,644,819 (+)NCBICelera
Cytogenetic Map12q11NCBI
Ints1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554609,116,891 - 9,143,120 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554609,116,650 - 9,149,470 (-)NCBIChiLan1.0ChiLan1.0
INTS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v266,420,370 - 6,454,596 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1754,745,070 - 54,779,296 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v071,719,254 - 1,753,150 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.171,838,001 - 1,871,974 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl71,838,302 - 1,871,554 (-)Ensemblpanpan1.1panPan2
INTS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1615,453,491 - 15,483,240 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl615,447,391 - 15,483,239 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha616,921,168 - 16,950,886 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0615,579,451 - 15,609,172 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl615,579,248 - 15,609,165 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1615,382,213 - 15,411,928 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0615,309,000 - 15,338,719 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0615,596,044 - 15,625,763 (+)NCBIUU_Cfam_GSD_1.0
Ints1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344143,383,776 - 143,412,780 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367541,597,575 - 1,626,398 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367541,597,574 - 1,626,578 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
INTS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3979,405 - 1,005,527 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13979,403 - 1,005,584 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.231,094,038 - 1,120,192 (-)NCBISscrofa10.2Sscrofa10.2susScr3
INTS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12820,098,155 - 20,132,683 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2820,098,586 - 20,132,859 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660901,581,188 - 1,618,582 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ints1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474026,956,688 - 26,983,394 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474026,952,076 - 26,983,595 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:208
Count of miRNA genes:177
Interacting mature miRNAs:191
Transcripts:ENSMUST00000072607
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
1301363Pbwg13_mpostnatal body weight growth 13 (mouse)Not determined5125133457151758149Mouse
1301715Elmaz2_melevated maze behavior 2 (mouse)Not determined5125178229141700466Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
10412191Bbaa24_mB.burgdorferi-associated arthritis 24 (mouse)Not determined5119945037141700466Mouse
1300913Bwefm_mbody weight females and males day 10 (mouse)Not determined5109439348143439459Mouse
13464143Bbaa2b_mB.burgdorferi-associated arthritis 2b (mouse)5133052969140709801Mouse
4141081Nidd7k_mNidd7 on KK-A (mouse)Not determined119945037149347326Mouse
11528552Scram1_mspinal cord resistance to astrocytoma modifier 1 (mouse)5121455402151758149Mouse
1300827Cora1_mcorrelation in cytokine production 1 (mouse)Not determined5115156883149157015Mouse
10043890Trigq4_mtriglyceride QTL 4 (mouse)Not determined5107906299141906412Mouse
1302079Lbw3_mlupus NZB x NZW 3 (mouse)Not determined5124700335151758149Mouse
13504737Ifvrq5_minfluenza virus resistance QTL 5 (mouse)5139509801151658149Mouse
1301986Bpq4_mblood pressure QTL 4 (mouse)Not determined5121555236151758149Mouse
13504735Ifvrq7_minfluenza virus resistance QTL 7 (mouse)5139509801151658149Mouse
1301857Bglq14_mbody growth late QTL 14 (mouse)Not determined5118948964151758149Mouse
12880406Jcdq2_mjoint cartilage degeneration QTL 2 (mouse)5129787831151758149Mouse
4142473Chlq11_mcirculating hormone level QTL 11 (mouse)Not determined5107906299141906412Mouse
13464251Ahl21_mage related hearing loss, early onset 21 (mouse)5109167240143167381Mouse
1301226Bbaa2_mB.burgdorferi-associated arthritis 2 (mouse)Not determined5115156883149157015Mouse
10412197Bbaa25_mB.burgdorferi-associated arthritis 25 (mouse)Not determined5109167240143167381Mouse
4141218Ath24_matherosclerosis 24 (mouse)Not determined129520084151758149Mouse
11049557Lmr26_mleishmaniasis resistance 26 (mouse)5133925558151758149Mouse
13464243Ahl20_mage related hearing loss, early onset 20 (mouse)5107906299141906412Mouse

Markers in Region
D5Dcr20  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385139,766,932 - 139,767,030UniSTSGRCm38
MGSCv375140,242,886 - 140,242,984UniSTSGRCm37
Celera5136,822,072 - 136,822,164UniSTS
Cytogenetic Map5G1UniSTS
cM Map5 UniSTS
Ints1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385139,762,043 - 139,762,463UniSTSGRCm38
MGSCv375140,237,997 - 140,238,417UniSTSGRCm37
Celera5136,817,183 - 136,817,603UniSTS
Cytogenetic Map5G1UniSTS
cM Map5 UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_026748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003955703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003955704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB257854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB257859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC167333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU701490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY198842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA327279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB526682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000072607   ⟹   ENSMUSP00000072406
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5139,737,037 - 139,761,428 (-)Ensembl
GRCm38.p6 Ensembl5139,751,282 - 139,775,673 (-)Ensembl
Ensembl Acc Id: ENSMUST00000196319
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5139,750,839 - 139,753,653 (-)Ensembl
GRCm38.p6 Ensembl5139,765,084 - 139,767,898 (-)Ensembl
Ensembl Acc Id: ENSMUST00000196379
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5139,752,853 - 139,761,429 (-)Ensembl
GRCm38.p6 Ensembl5139,767,098 - 139,775,674 (-)Ensembl
Ensembl Acc Id: ENSMUST00000196864   ⟹   ENSMUSP00000142362
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5139,737,037 - 139,761,429 (-)Ensembl
GRCm38.p6 Ensembl5139,772,618 - 139,775,674 (-)Ensembl
Ensembl Acc Id: ENSMUST00000197156
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5139,755,129 - 139,757,486 (-)Ensembl
GRCm38.p6 Ensembl5139,769,374 - 139,771,731 (-)Ensembl
Ensembl Acc Id: ENSMUST00000197187   ⟹   ENSMUSP00000143274
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5139,737,041 - 139,740,733 (-)Ensembl
GRCm38.p6 Ensembl5139,751,286 - 139,754,978 (-)Ensembl
Ensembl Acc Id: ENSMUST00000197727
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5139,747,342 - 139,748,250 (-)Ensembl
GRCm38.p6 Ensembl5139,761,587 - 139,762,495 (-)Ensembl
Ensembl Acc Id: ENSMUST00000198615
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5139,737,040 - 139,740,613 (-)Ensembl
GRCm38.p6 Ensembl5139,751,285 - 139,754,858 (-)Ensembl
Ensembl Acc Id: ENSMUST00000200339
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5139,753,179 - 139,754,209 (-)Ensembl
GRCm38.p6 Ensembl5139,767,424 - 139,768,454 (-)Ensembl
Ensembl Acc Id: ENSMUST00000200393   ⟹   ENSMUSP00000143789
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5139,737,040 - 139,761,393 (-)Ensembl
GRCm38.p6 Ensembl5139,751,285 - 139,775,638 (-)Ensembl
RefSeq Acc Id: NM_026748   ⟹   NP_081024
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395139,737,040 - 139,761,429 (-)NCBI
GRCm385139,751,282 - 139,775,678 (-)NCBI
MGSCv375140,227,236 - 140,251,632 (-)RGD
Celera5136,806,422 - 136,830,799 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006504727   ⟹   XP_006504790
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395139,737,037 - 139,761,451 (-)NCBI
GRCm385139,751,282 - 139,775,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504728   ⟹   XP_006504791
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395139,737,037 - 139,761,451 (-)NCBI
GRCm385139,751,282 - 139,775,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504729   ⟹   XP_006504792
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395139,737,037 - 139,761,451 (-)NCBI
GRCm385139,751,282 - 139,775,697 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003955703
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395139,737,037 - 139,761,455 (-)NCBI
GRCm385139,751,282 - 139,775,702 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003955704
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395139,737,732 - 139,761,455 (-)NCBI
GRCm385139,751,977 - 139,775,702 (-)NCBI
Sequence:
RefSeq Acc Id: NP_081024   ⟸   NM_026748
- UniProtKB: Q91Z01 (UniProtKB/Swiss-Prot),   Q80UQ7 (UniProtKB/Swiss-Prot),   Q6P4S8 (UniProtKB/Swiss-Prot),   Q0KK58 (UniProtKB/Swiss-Prot),   Q9CTF7 (UniProtKB/Swiss-Prot),   A0A0G2JDG8 (UniProtKB/TrEMBL),   K3W4P2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006504790   ⟸   XM_006504727
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JH17 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006504792   ⟸   XM_006504729
- Peptide Label: isoform X3
- UniProtKB: A0A0G2JH17 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006504791   ⟸   XM_006504728
- Peptide Label: isoform X2
- UniProtKB: A0A0G2JH17 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000143274   ⟸   ENSMUST00000197187
Ensembl Acc Id: ENSMUSP00000072406   ⟸   ENSMUST00000072607
Ensembl Acc Id: ENSMUSP00000142362   ⟸   ENSMUST00000196864
Ensembl Acc Id: ENSMUSP00000143789   ⟸   ENSMUST00000200393
Protein Domains
Integrator complex subunit 1 INTS2-binding   Integrator complex subunit 1 R3   Integrator complex subunit 1 R4   Integrator complex subunit 1 RPB2-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6P4S8-F1-model_v2 AlphaFold Q6P4S8 1-2195 view protein structure

Promoters
RGD ID:6888572
Promoter ID:EPDNEW_M7737
Type:initiation region
Name:Ints1_1
Description:Mus musculus integrator complex subunit 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385139,775,674 - 139,775,734EPDNEW
RGD ID:6837738
Promoter ID:MM_KWN:44626
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung,   Spleen
Transcripts:UC009AGZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365140,230,391 - 140,231,242 (-)MPROMDB
RGD ID:6837768
Promoter ID:MM_KWN:44628
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_026748,   UC009AHA.1,   UC009AHC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365140,251,336 - 140,251,836 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915760 AgrOrtholog
Ensembl Genes ENSMUSG00000029547 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000072607 ENTREZGENE
  ENSMUST00000072607.9 UniProtKB/TrEMBL
  ENSMUST00000196864.3 UniProtKB/TrEMBL
  ENSMUST00000197187.2 UniProtKB/TrEMBL
  ENSMUST00000200393 ENTREZGENE
  ENSMUST00000200393.5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF3677 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  INT1_R3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  INTS1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  INTS1_INTS2-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  INTS1_R4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:68510 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1915760 ENTREZGENE
NCBI Gene 68510 ENTREZGENE
PANTHER INTEGRATOR COMPLEX SUBUNIT 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR21224 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF3677 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  INT1_R3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  INTS1_INTS2-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  INTS1_R4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ints1 PhenoGen
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JDG8 ENTREZGENE
  A0A0G2JFR3_MOUSE UniProtKB/TrEMBL
  A0A0G2JH17 ENTREZGENE, UniProtKB/TrEMBL
  INT1_MOUSE UniProtKB/Swiss-Prot
  K3W4P2 ENTREZGENE, UniProtKB/TrEMBL
  Q0KK58 ENTREZGENE
  Q3U1N8_MOUSE UniProtKB/TrEMBL
  Q6P4S8 ENTREZGENE
  Q80UQ7 ENTREZGENE
  Q91Z01 ENTREZGENE
  Q9CTF7 ENTREZGENE
UniProt Secondary A0A0G2JDG8 UniProtKB/TrEMBL
  Q0KK58 UniProtKB/Swiss-Prot
  Q80UQ7 UniProtKB/Swiss-Prot
  Q91Z01 UniProtKB/Swiss-Prot
  Q9CTF7 UniProtKB/Swiss-Prot