Ubn2 (ubinuclein 2) - Rat Genome Database

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Gene: Ubn2 (ubinuclein 2) Mus musculus
Analyze
Symbol: Ubn2
Name: ubinuclein 2
RGD ID: 1558459
MGI Page MGI
Description: Predicted to be involved in chromatin organization. Predicted to be located in nucleoplasm. Predicted to be active in nucleus. Is expressed in central nervous system and retina. Orthologous to human UBN2 (ubinuclein 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2900060J04Rik; 6030408G03Rik; BC060116; D130059P03Rik; mKIAA2030; ubinuclein-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm6418  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39638,410,860 - 38,489,698 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl638,410,885 - 38,501,760 (+)EnsemblGRCm39 Ensembl
GRCm38638,433,925 - 38,512,763 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl638,433,950 - 38,524,825 (+)EnsemblGRCm38mm10GRCm38
MGSCv37638,383,925 - 38,462,763 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36638,363,558 - 38,432,208 (+)NCBIMGSCv36mm8
Celera638,414,640 - 38,493,684 (+)NCBICelera
Cytogenetic Map6B1NCBI
cM Map617.79NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (IEA,ISO)
nucleus  (IBA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15226823   PMID:15368895   PMID:15582152   PMID:16141072  
PMID:16141073   PMID:16602821   PMID:16919269   PMID:20362542   PMID:21267068   PMID:21677750   PMID:21873635   PMID:28671696   PMID:30285846   PMID:30595499   PMID:31077711   PMID:38355793  


Genomics

Comparative Map Data
Ubn2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39638,410,860 - 38,489,698 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl638,410,885 - 38,501,760 (+)EnsemblGRCm39 Ensembl
GRCm38638,433,925 - 38,512,763 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl638,433,950 - 38,524,825 (+)EnsemblGRCm38mm10GRCm38
MGSCv37638,383,925 - 38,462,763 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36638,363,558 - 38,432,208 (+)NCBIMGSCv36mm8
Celera638,414,640 - 38,493,684 (+)NCBICelera
Cytogenetic Map6B1NCBI
cM Map617.79NCBI
UBN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387139,231,237 - 139,330,428 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7139,230,356 - 139,308,236 (+)EnsemblGRCh38hg38GRCh38
GRCh377138,915,983 - 138,992,982 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367138,566,991 - 138,643,522 (+)NCBINCBI36Build 36hg18NCBI36
Celera7133,654,387 - 133,731,150 (+)NCBICelera
Cytogenetic Map7q34NCBI
HuRef7133,226,153 - 133,302,818 (+)NCBIHuRef
CHM1_17138,849,976 - 138,926,728 (+)NCBICHM1_1
T2T-CHM13v2.07140,544,524 - 140,642,706 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27138,260,797 - 138,337,551 (+)NCBI
Ubn2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8468,130,497 - 68,218,471 (+)NCBIGRCr8
mRatBN7.2467,165,278 - 67,251,562 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl467,166,346 - 67,230,491 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx472,107,959 - 72,171,977 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0468,029,054 - 68,093,070 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0466,426,812 - 66,490,803 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0466,164,639 - 66,254,297 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl466,165,845 - 66,233,230 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0465,976,696 - 66,065,746 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4465,999,406 - 66,064,325 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1466,275,556 - 66,339,887 (+)NCBI
Celera462,184,683 - 62,248,122 (+)NCBICelera
Cytogenetic Map4q23NCBI
Ubn2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554943,758,616 - 3,834,887 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554943,734,414 - 3,828,174 (-)NCBIChiLan1.0ChiLan1.0
UBN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26176,030,630 - 176,111,081 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1728,044,251 - 28,121,335 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07131,179,164 - 131,256,244 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17143,664,282 - 143,741,053 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7143,664,596 - 143,730,647 (+)Ensemblpanpan1.1panPan2
UBN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1169,446,345 - 9,510,925 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl169,446,345 - 9,510,625 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1610,284,611 - 10,352,577 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0169,343,004 - 9,430,188 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl169,344,195 - 9,429,826 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1169,293,499 - 9,380,630 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0169,137,439 - 9,224,523 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0169,208,600 - 9,295,741 (-)NCBIUU_Cfam_GSD_1.0
Ubn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511815,657,534 - 15,736,458 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365923,483,373 - 3,553,618 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365923,483,124 - 3,554,890 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UBN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1810,377,077 - 10,451,255 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11810,371,121 - 10,451,243 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21810,841,038 - 10,933,658 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UBN2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121107,974,621 - 108,075,403 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21107,975,193 - 108,043,523 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660724,802,477 - 4,902,105 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ubn2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476519,628,458 - 19,756,040 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476519,627,442 - 19,737,408 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:5211
Count of miRNA genes:994
Interacting mature miRNAs:1505
Transcripts:ENSMUST00000039127, ENSMUST00000159215, ENSMUST00000159447, ENSMUST00000159925, ENSMUST00000160583, ENSMUST00000161280, ENSMUST00000162026, ENSMUST00000162423, ENSMUST00000162593
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
4140989Spqq2_msperm quality QTL 2 (mouse)Not determined1771159851711719Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080576983Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348703611Mouse
10043869Cia6a_mcollagen induced arthritis QTL 6a (mouse)Not determined61211797146118069Mouse
11252142Mom12_mModifier of Min 12 (mouse)63387226167872400Mouse
10043868Cia6b_mcollagen induced arthritis QTL 6b (mouse)Not determined63471159838946537Mouse
1301850Fglu_mfasting glucose (mouse)Not determined61771159851711719Mouse
4141749Obrq2_mobesity resistance QTL 2 (mouse)Not determined1275122146751333Mouse
1300959Lxw2_mlupus BXSB x NZW 2 (mouse)Not determined63387226167872400Mouse
1300767Aliq4_macute lung injury QTL 4 (mouse)Not determined63627333270273435Mouse
1301724Pcd4ts1_mp-glycoprotein positive CD4 T cell subset 1 (mouse)Not determined61771159851711719Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
14746995Manh60_mmandible shape 60 (mouse)63720266271202662Mouse
10412107Desp4_mdespair 4 (mouse)Not determined62004983054049830Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414773364675Mouse
4141094Hrtr1_mheart rate 1 (mouse)Not determined3674146370741463Mouse
4141988Obrq3_mobesity resistance QTL 3 (mouse)Not determined2829099362291115Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348703611Mouse
11353840Bmiq2_mbody mass index QTL 2 (mouse)6450382345291115Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487403016Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
12904940Edlmmq5_mextensor digitorum longus muscle mass QTL 5 (mouse)61961634653616346Mouse
4141782Mrdq5_mmodifier of retinal degeneration QTL 5 (mouse)Not determined3282758578215957Mouse
12904943Tammq4_mtibialis anterior muscle mass QTL 4 (mouse)61961634653616346Mouse
10412213Sxbq2_mSGC/Knj cross B6 QTL 2 (mouse)Not determined61991268571299759Mouse
12880425V25Dq5_mvitamin D inactive form serum level QTL 5 (mouse)63267698066676980Mouse
1302051Sluc7_msusceptibility to lung cancer 7 (mouse)Not determined6929707443297168Mouse
4141454Obrq4_mobesity resistance QTL 4 (mouse)Not determined3170349965703611Mouse
14700690Ccs6_mcolon cancer susceptibility 6 (mouse)62377693457776934Mouse
1357539Bsbob3_mBSB obesity 3 (mouse)Not determined63644845670448576Mouse
27226726Tibmd7_mtibia midshaft diameter 7, 16 week (mouse)61769999953476985Mouse
12904952Gmmq4_mgastrocnemius muscle mass QTL 4 (mouse)61961634653616346Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348703611Mouse
1301998Bts2_mbladder tumor susceptibility 2 (mouse)Not determined61275122146751333Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62499999979976983Mouse

Markers in Region
D6Mit154  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38638,512,024 - 38,512,131UniSTSGRCm38
MGSCv37638,462,024 - 38,462,131UniSTSGRCm37
Celera638,492,945 - 38,493,052UniSTS
Cytogenetic Map6B1UniSTS
cM Map615.3UniSTS
Whitehead Genetic67.7UniSTS
Whitehead_YAC6 UniSTS
UniSTS:235415  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38638,448,198 - 38,448,422UniSTSGRCm38
MGSCv37638,398,198 - 38,398,422UniSTSGRCm37
Celera638,428,729 - 38,428,953UniSTS
Cytogenetic Map6B1UniSTS
UniSTS:235416  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38638,485,668 - 38,485,897UniSTSGRCm38
MGSCv37638,435,668 - 38,435,897UniSTSGRCm37
Celera638,466,590 - 38,466,819UniSTS
Cytogenetic Map6B1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_177185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC124762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC127273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC043095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC044744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC060116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF545710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ172473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000039127   ⟹   ENSMUSP00000036188
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl638,411,108 - 38,479,514 (+)Ensembl
GRCm38.p6 Ensembl638,434,173 - 38,502,579 (+)Ensembl
Ensembl Acc Id: ENSMUST00000159215
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl638,460,180 - 38,465,279 (+)Ensembl
GRCm38.p6 Ensembl638,483,245 - 38,488,344 (+)Ensembl
Ensembl Acc Id: ENSMUST00000159447   ⟹   ENSMUSP00000123836
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl638,467,939 - 38,501,760 (+)Ensembl
GRCm38.p6 Ensembl638,491,004 - 38,524,825 (+)Ensembl
Ensembl Acc Id: ENSMUST00000159925
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl638,461,028 - 38,479,514 (+)Ensembl
GRCm38.p6 Ensembl638,484,093 - 38,502,579 (+)Ensembl
Ensembl Acc Id: ENSMUST00000160583   ⟹   ENSMUSP00000124043
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl638,410,885 - 38,489,698 (+)Ensembl
GRCm38.p6 Ensembl638,433,950 - 38,512,763 (+)Ensembl
Ensembl Acc Id: ENSMUST00000161280
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl638,440,676 - 38,461,789 (+)Ensembl
GRCm38.p6 Ensembl638,463,741 - 38,484,854 (+)Ensembl
Ensembl Acc Id: ENSMUST00000162026
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl638,439,738 - 38,440,517 (+)Ensembl
GRCm38.p6 Ensembl638,462,803 - 38,463,582 (+)Ensembl
Ensembl Acc Id: ENSMUST00000162423
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl638,460,082 - 38,464,395 (+)Ensembl
GRCm38.p6 Ensembl638,483,147 - 38,487,460 (+)Ensembl
Ensembl Acc Id: ENSMUST00000162593   ⟹   ENSMUSP00000124352
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl638,417,468 - 38,501,726 (+)Ensembl
GRCm38.p6 Ensembl638,440,533 - 38,524,791 (+)Ensembl
RefSeq Acc Id: NM_177185   ⟹   NP_796159
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39638,410,860 - 38,489,698 (+)NCBI
GRCm38638,433,925 - 38,512,763 (+)ENTREZGENE
MGSCv37638,383,925 - 38,462,763 (+)RGD
Celera638,414,640 - 38,493,684 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_796159   ⟸   NM_177185
- UniProtKB: Q8BQ40 (UniProtKB/Swiss-Prot),   Q80ZZ9 (UniProtKB/Swiss-Prot),   Q69Z27 (UniProtKB/Swiss-Prot),   Q8BRI2 (UniProtKB/Swiss-Prot),   Q80WC1 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000123836   ⟸   ENSMUST00000159447
Ensembl Acc Id: ENSMUSP00000124043   ⟸   ENSMUST00000160583
Ensembl Acc Id: ENSMUSP00000036188   ⟸   ENSMUST00000039127
Ensembl Acc Id: ENSMUSP00000124352   ⟸   ENSMUST00000162593
Protein Domains
Hpc2-related   Ubinuclein middle

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80WC1-F1-model_v2 AlphaFold Q80WC1 1-1314 view protein structure

Promoters
RGD ID:6838700
Promoter ID:MM_KWN:45624
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:BC048567_1700021L22RIK,   ENSMUST00000090271,   NM_177185
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36638,383,201 - 38,384,772 (-)MPROMDB
RGD ID:6889364
Promoter ID:EPDNEW_M8133
Type:initiation region
Name:Ubn2_1
Description:Mus musculus ubinuclein 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38638,433,925 - 38,433,985EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2444236 AgrOrtholog
Ensembl Genes ENSMUSG00000038538 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000039127.15 UniProtKB/Swiss-Prot
  ENSMUST00000159447.2 UniProtKB/TrEMBL
  ENSMUST00000160583 ENTREZGENE
  ENSMUST00000160583.8 UniProtKB/Swiss-Prot
  ENSMUST00000162593.2 UniProtKB/TrEMBL
InterPro HRD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UBN_middle_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:320538 UniProtKB/Swiss-Prot
MGD MGI:2444236 ENTREZGENE
NCBI Gene 320538 ENTREZGENE
PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR21669:SF10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HUN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UBN_AB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ubn2 PhenoGen
UniProt F6TB64_MOUSE UniProtKB/TrEMBL
  F6UTU1_MOUSE UniProtKB/TrEMBL
  Q69Z27 ENTREZGENE
  Q80WC1 ENTREZGENE
  Q80ZZ9 ENTREZGENE
  Q8BQ40 ENTREZGENE
  Q8BRI2 ENTREZGENE
  UBN2_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q69Z27 UniProtKB/Swiss-Prot
  Q80ZZ9 UniProtKB/Swiss-Prot
  Q8BQ40 UniProtKB/Swiss-Prot
  Q8BRI2 UniProtKB/Swiss-Prot