Dtx3 (deltex 3, E3 ubiquitin ligase) - Rat Genome Database

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Gene: Dtx3 (deltex 3, E3 ubiquitin ligase) Mus musculus
Analyze
Symbol: Dtx3
Name: deltex 3, E3 ubiquitin ligase
RGD ID: 1557271
MGI Page MGI
Description: Predicted to enable ubiquitin protein ligase activity. Acts upstream of or within Notch signaling pathway. Predicted to be located in cytoplasm. Predicted to be active in nucleoplasm. Is expressed in central nervous system and urinary system. Orthologous to human DTX3 (deltex E3 ubiquitin ligase 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: deltex 3 homolog; Deltex3; mDTX3; mg310; MGC106339; probable E3 ubiquitin-protein ligase DTX3; protein deltex-3; RING-type E3 ubiquitin transferase DTX3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910127,026,242 - 127,032,367 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10127,026,247 - 127,031,597 (-)EnsemblGRCm39 Ensembl
GRCm3810127,190,373 - 127,196,498 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10127,190,378 - 127,195,728 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710126,627,434 - 126,632,765 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610126,593,327 - 126,598,658 (-)NCBIMGSCv36mm8
Celera10129,583,408 - 129,588,773 (-)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1074.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dtx3Mousecataract 15 multiple types  ISODTX3 (Homo sapiens)8554872ClinVar Annotator: match by term: Cataract 15 multiple typesClinVarPMID:28492532
Dtx3MouseCharcot-Marie-Tooth disease axonal type 2U  ISODTX3 (Homo sapiens)8554872ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE more ...ClinVarPMID:28492532
Dtx3Mousefamilial melanoma  ISODTX3 (Homo sapiens)8554872ClinVar Annotator: match by term: Familial melanomaClinVarPMID:28492532
Dtx3MouseINTERSTITIAL LUNG AND LIVER DISEASE  ISODTX3 (Homo sapiens)8554872ClinVar Annotator: match by term: Interstitial lung and liver diseaseClinVarPMID:28492532
Dtx3Mouseparaplegia  ISODTX3 (Homo sapiens)8554872ClinVar Annotator: match by term: Spastic paraplegiaClinVarPMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dtx3MouseBreast Neoplasms  ISODTX3 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25151356

1 to 20 of 56 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dtx3Mouse1,2-dimethylhydrazine increases expressionEXP 64804641 and 2-Dimethylhydrazine results in increased expression of DTX3 mRNACTDPMID:22206623
Dtx3Mouse17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of DTX3 mRNACTDPMID:17942748
Dtx3Mouse17alpha-ethynylestradiol decreases expressionISODtx3 (Rattus norvegicus)6480464Ethinyl Estradiol results in decreased expression of DTX3 mRNACTDPMID:29097150
Dtx3Mouse17alpha-ethynylestradiol multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of DTX3 mRNACTDPMID:17942748
Dtx3Mouse17beta-estradiol decreases expressionISODTX3 (Homo sapiens)6480464Estradiol results in decreased expression of DTX3 mRNACTDPMID:31614463
Dtx3Mouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with AHR gene mutant form] results in increased expression of DTX3 mRNA and [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of DTX3 mRNACTDPMID:17942748 and PMID:19465110
Dtx3Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISODtx3 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of DTX3 mRNACTDPMID:34747641
Dtx3Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionISODTX3 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of DTX3 mRNACTDPMID:21296121
Dtx3Mouse4,4'-sulfonyldiphenol multiple interactionsISODtx3 (Rattus norvegicus)6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of DTX3 mRNACTDPMID:36041667
Dtx3Mouse6-propyl-2-thiouracil decreases expressionISODtx3 (Rattus norvegicus)6480464Propylthiouracil results in decreased expression of DTX3 mRNACTDPMID:30047161
Dtx3Mouseacrolein multiple interactionsISODTX3 (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with Ozone] results in decreased expression of DTX3 mRNACTDPMID:32845096
Dtx3Mouseaflatoxin B1 decreases methylationISODTX3 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of DTX3 geneCTDPMID:27153756
Dtx3Mouseamitrole decreases expressionISODtx3 (Rattus norvegicus)6480464Amitrole results in decreased expression of DTX3 mRNACTDPMID:30047161
Dtx3Mouseantirheumatic drug increases expressionISODTX3 (Homo sapiens)6480464Antirheumatic Agents results in increased expression of DTX3 mRNACTDPMID:24449571
Dtx3Mousebenzo[a]pyrene increases methylationISODTX3 (Homo sapiens)6480464Benzo(a)pyrene results in increased methylation of DTX3 promoterCTDPMID:27901495
Dtx3Mousebis(2-ethylhexyl) phthalate decreases expressionISODTX3 (Homo sapiens)6480464Diethylhexyl Phthalate results in decreased expression of DTX3 mRNACTDPMID:31163220
Dtx3Mousebis(2-ethylhexyl) phthalate increases expressionEXP 6480464Diethylhexyl Phthalate results in increased expression of DTX3 mRNACTDPMID:33754040
Dtx3Mousebisphenol A affects expressionISODtx3 (Rattus norvegicus)6480464bisphenol A affects the expression of DTX3 mRNACTDPMID:25181051
Dtx3Mousebisphenol A multiple interactionsISODtx3 (Rattus norvegicus)6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of DTX3 mRNACTDPMID:36041667
Dtx3Mousebisphenol A increases expressionISODtx3 (Rattus norvegicus)6480464bisphenol A results in increased expression of DTX3 mRNACTDPMID:34947998

1 to 20 of 56 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dtx3MouseNotch signaling pathway acts_upstream_of_or_withinIDA 2290270 PMID:11226752MGIPMID:11226752
Dtx3MouseNotch signaling pathway acts_upstream_of_or_withinTAS 2290270 PMID:11226752MGIPMID:11226752
Dtx3MouseNotch signaling pathway involved_inIBAPANTHER:PTN000289912 more ...2290270 GO_CentralGO_REF:0000033
Dtx3Mouseprotein ubiquitination involved_inIEAUniPathway:UPA001432290270 UniProtGO_REF:0000041
Dtx3Mouseprotein ubiquitination involved_inIBAPANTHER:PTN000289912 more ...2290270 GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dtx3Mousecytoplasm located_inIEAUniProtKB-SubCell:SL-00862290270 UniProtGO_REF:0000044
Dtx3Mousenucleoplasm is_active_inIBAPANTHER:PTN000289912 more ...2290270 GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dtx3Mouseprotein binding enablesIPIPR:Q8R3P22290270 PMID:11226752MGIPMID:11226752
Dtx3Mousetransferase activity enablesIEAUniProtKB-KW:KW-08082290270 UniProtGO_REF:0000043
Dtx3Mouseubiquitin protein ligase activity enablesIBAPANTHER:PTN000289912 more ...2290270 GO_CentralGO_REF:0000033
Dtx3Mousezinc ion binding enablesIEAUniProtKB-KW:KW-08632290270 UniProtGO_REF:0000043

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dtx3MouseNotch signaling pathway   IEA 6907045 KEGGmmu:04330
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dtx3Mousedecreased mean corpuscular hemoglobin  IEA 5509061 MGI 

#
Reference Title
Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11226752   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18287559  
PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22988430   PMID:24952961   PMID:34321999   PMID:38355793  



Dtx3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910127,026,242 - 127,032,367 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10127,026,247 - 127,031,597 (-)EnsemblGRCm39 Ensembl
GRCm3810127,190,373 - 127,196,498 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10127,190,378 - 127,195,728 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710126,627,434 - 126,632,765 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610126,593,327 - 126,598,658 (-)NCBIMGSCv36mm8
Celera10129,583,408 - 129,588,773 (-)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1074.5NCBI
DTX3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381257,604,824 - 57,609,802 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1257,604,622 - 57,609,804 (+)EnsemblGRCh38hg38GRCh38
GRCh371257,998,607 - 58,003,585 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361256,284,871 - 56,289,850 (+)NCBINCBI36Build 36hg18NCBI36
Build 341256,284,870 - 56,289,850NCBI
Celera1257,654,419 - 57,659,398 (+)NCBICelera
Cytogenetic Map12q13.3NCBI
HuRef1255,036,290 - 55,041,268 (+)NCBIHuRef
CHM1_11257,966,420 - 57,971,399 (+)NCBICHM1_1
T2T-CHM13v2.01257,572,308 - 57,578,021 (+)NCBIT2T-CHM13v2.0
Dtx3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8764,898,693 - 64,904,636 (-)NCBIGRCr8
mRatBN7.2763,013,769 - 63,018,431 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl763,013,371 - 63,018,522 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx764,903,070 - 64,907,731 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0767,105,474 - 67,110,135 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0766,906,542 - 66,911,203 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0770,476,737 - 70,482,852 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl770,476,729 - 70,481,796 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0770,654,378 - 70,660,222 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,145,276 - 67,149,937 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera760,155,333 - 60,160,117 (-)NCBICelera
Cytogenetic Map7q22NCBI
Dtx3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554585,328,725 - 5,334,092 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554585,328,723 - 5,334,092 (+)NCBIChiLan1.0ChiLan1.0
DTX3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21036,731,185 - 36,734,797 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11236,727,956 - 36,731,568 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01231,316,968 - 31,322,340 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11231,576,351 - 31,581,819 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1231,577,001 - 31,579,669 (-)Ensemblpanpan1.1panPan2
DTX3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1101,684,394 - 1,687,244 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl101,683,410 - 1,686,814 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha101,745,460 - 1,750,402 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0101,691,642 - 1,696,581 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl101,691,625 - 1,696,579 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1101,669,425 - 1,674,360 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0101,911,185 - 1,916,104 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0102,036,415 - 2,041,352 (+)NCBIUU_Cfam_GSD_1.0
Dtx3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494557,115,836 - 57,121,204 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366461,751,387 - 1,754,353 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366461,749,061 - 1,754,399 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DTX3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl522,867,711 - 22,873,393 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1522,867,691 - 22,873,413 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2524,734,097 - 24,820,351 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DTX3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11153,512,657 - 53,517,978 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1153,515,043 - 53,517,330 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037192,444,161 - 192,449,230 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dtx3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480210,354,077 - 10,359,769 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480210,353,488 - 10,359,690 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Dtx3
248 total Variants

Predicted Target Of
Summary Value
Count of predictions:1630
Count of miRNA genes:508
Interacting mature miRNAs:605
Transcripts:ENSMUST00000038217, ENSMUST00000116229, ENSMUST00000125254, ENSMUST00000130855, ENSMUST00000137151, ENSMUST00000144322
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 39 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142461Bmd25_mbone mineral density 25 (mouse)Not determined1097217101130530862Mouse
1301968Estq4_mestradiol regulated response QTL 4 (mouse)Not determined10100986516130530862Mouse
12904001Opfaq10_mopen field activity QTL 10 (mouse)10125633671129466375Mouse
12879490Frct3_mfear conditioning traits 3 (mouse)10122785970129466996Mouse
11049570Lmr25b_mleishmaniasis resistance 25b (mouse)10108575094130530862Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
11533921Mvb2_mmodifier of vibrator 2 (mouse)1097217101130530862Mouse
4141361Cfmq3_mcystic fibrosis modifier QTL 3 (mouse)Not determined10101497164130530862Mouse
4141487Tgq21_mtriglyceride QTL 21 (mouse)Not determined104110021130530862Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse

1 to 10 of 39 rows





1 to 30 of 52 rows
RefSeq Transcripts NM_001368332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB015425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC144852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 52 rows

Ensembl Acc Id: ENSMUST00000038217   ⟹   ENSMUSP00000044627
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10127,026,247 - 127,031,578 (-)Ensembl
GRCm38.p6 Ensembl10127,190,378 - 127,195,709 (-)Ensembl
Ensembl Acc Id: ENSMUST00000116229   ⟹   ENSMUSP00000111937
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10127,026,511 - 127,031,596 (-)Ensembl
GRCm38.p6 Ensembl10127,190,642 - 127,195,727 (-)Ensembl
Ensembl Acc Id: ENSMUST00000125254
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10127,029,417 - 127,031,588 (-)Ensembl
GRCm38.p6 Ensembl10127,193,548 - 127,195,719 (-)Ensembl
Ensembl Acc Id: ENSMUST00000130855   ⟹   ENSMUSP00000114776
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10127,026,247 - 127,031,578 (-)Ensembl
GRCm38.p6 Ensembl10127,190,378 - 127,195,709 (-)Ensembl
Ensembl Acc Id: ENSMUST00000137151   ⟹   ENSMUSP00000115302
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10127,026,694 - 127,030,335 (-)Ensembl
GRCm38.p6 Ensembl10127,190,825 - 127,194,466 (-)Ensembl
Ensembl Acc Id: ENSMUST00000144322   ⟹   ENSMUSP00000116510
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10127,028,888 - 127,031,597 (-)Ensembl
GRCm38.p6 Ensembl10127,193,019 - 127,195,728 (-)Ensembl
RefSeq Acc Id: NM_001368332   ⟹   NP_001355261
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,242 - 127,031,597 (-)NCBI
GRCm3810127,190,373 - 127,195,728 (-)NCBI
Sequence:
RefSeq Acc Id: NM_030714   ⟹   NP_109639
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,578 (-)NCBI
GRCm3810127,190,378 - 127,195,709 (-)NCBI
MGSCv3710126,627,434 - 126,632,765 (-)RGD
Celera10129,583,408 - 129,588,773 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514334   ⟹   XP_006514397
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,651 (-)NCBI
GRCm3810127,190,378 - 127,195,782 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514336   ⟹   XP_006514399
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,030,679 (-)NCBI
GRCm3810127,190,378 - 127,194,807 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514337   ⟹   XP_006514400
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,651 (-)NCBI
GRCm3810127,190,378 - 127,195,782 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245398   ⟹   XP_030101258
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,030,677 (-)NCBI
GRCm3810127,190,378 - 127,194,807 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245399   ⟹   XP_030101259
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,208 (-)NCBI
GRCm3810127,190,378 - 127,195,338 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245400   ⟹   XP_030101260
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,032,367 (-)NCBI
GRCm3810127,190,378 - 127,196,498 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245401   ⟹   XP_030101261
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,032,291 (-)NCBI
GRCm3810127,190,378 - 127,196,413 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245402   ⟹   XP_030101262
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,032,315 (-)NCBI
GRCm3810127,190,378 - 127,196,404 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245403   ⟹   XP_030101263
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,032,290 (-)NCBI
GRCm3810127,190,378 - 127,196,404 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245404   ⟹   XP_030101264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,206 (-)NCBI
GRCm3810127,190,378 - 127,195,336 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245405   ⟹   XP_030101265
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,436 (-)NCBI
GRCm3810127,190,378 - 127,195,567 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156115   ⟹   XP_036012008
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,457 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156116   ⟹   XP_036012009
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,032,291 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156117   ⟹   XP_036012010
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,570 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156118   ⟹   XP_036012011
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,032,291 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156119   ⟹   XP_036012012
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156120   ⟹   XP_036012013
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,815 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156121   ⟹   XP_036012014
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,570 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156122   ⟹   XP_036012015
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,031,807 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156123   ⟹   XP_036012016
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,026,247 - 127,032,255 (-)NCBI
Sequence:
1 to 30 of 33 rows
Protein RefSeqs NP_001355261 (Get FASTA)   NCBI Sequence Viewer  
  NP_109639 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514397 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514399 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514400 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101258 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101259 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101260 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101261 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101262 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101263 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101264 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101265 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012008 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012009 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012010 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012011 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012012 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012013 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012014 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012015 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012016 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH99687 (Get FASTA)   NCBI Sequence Viewer  
  AAI38305 (Get FASTA)   NCBI Sequence Viewer  
  AAI57900 (Get FASTA)   NCBI Sequence Viewer  
  BAB18942 (Get FASTA)   NCBI Sequence Viewer  
  BAE28557 (Get FASTA)   NCBI Sequence Viewer  
  EDL24483 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000044627
  ENSMUSP00000044627.8
1 to 30 of 33 rows
1 to 5 of 27 rows
1 to 5 of 27 rows
RefSeq Acc Id: NP_109639   ⟸   NM_030714
- Peptide Label: isoform 1
- UniProtKB: Q4FZD3 (UniProtKB/Swiss-Prot),   Q9ER06 (UniProtKB/Swiss-Prot),   Q80V91 (UniProtKB/Swiss-Prot),   Q3UFK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514397   ⟸   XM_006514334
- Peptide Label: isoform X1
- UniProtKB: Q3UFK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514400   ⟸   XM_006514337
- Peptide Label: isoform X2
- UniProtKB: E9Q3J1 (UniProtKB/TrEMBL),   Q3UFK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514399   ⟸   XM_006514336
- Peptide Label: isoform X1
- UniProtKB: Q3UFK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001355261   ⟸   NM_001368332
- Peptide Label: isoform 2
- UniProtKB: D3YV13 (UniProtKB/TrEMBL),   Q3UFK3 (UniProtKB/TrEMBL)
Deltex C-terminal   RING-type

Name Modeler Protein Id AA Range Protein Structure
AF-Q80V91-F1-model_v2 AlphaFold Q80V91 1-347 view protein structure

RGD ID:6819212
Promoter ID:MM_KWN:5874
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:OTTMUST00000084112
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610126,632,031 - 126,632,531 (-)MPROMDB
RGD ID:6819211
Promoter ID:MM_KWN:5876
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000116229,   NM_030714,   OTTMUST00000084107,   OTTMUST00000084109,   OTTMUST00000084110,   OTTMUST00000084111,   UC007HIN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610126,632,791 - 126,633,737 (-)MPROMDB
RGD ID:8673476
Promoter ID:EPDNEW_M14769
Type:multiple initiation site
Name:Dtx3_1
Description:Mus musculus deltex 3, E3 ubiquitin ligase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3810127,195,728 - 127,195,788EPDNEW


1 to 35 of 35 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000040415 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000038217 ENTREZGENE
  ENSMUST00000038217.14 UniProtKB/Swiss-Prot
  ENSMUST00000116229 ENTREZGENE
  ENSMUST00000130855 ENTREZGENE
Gene3D-CATH 3.30.390.130 UniProtKB/Swiss-Prot
  3.30.40.10 UniProtKB/Swiss-Prot
InterPro Deltex_C UniProtKB/Swiss-Prot
  Deltex_C_sf UniProtKB/Swiss-Prot
  Deltex_fam UniProtKB/Swiss-Prot
  Znf_RING UniProtKB/Swiss-Prot
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot
  Znf_RING_CS UniProtKB/Swiss-Prot
KEGG Report mmu:80904 UniProtKB/Swiss-Prot
MGD MGI:2135752 ENTREZGENE
NCBI Gene 80904 ENTREZGENE
PANTHER PTHR12622 UniProtKB/Swiss-Prot
Pfam DTC UniProtKB/Swiss-Prot
  zf-C3HC4_2 UniProtKB/Swiss-Prot
PhenoGen Dtx3 PhenoGen
PROSITE ZF_RING_1 UniProtKB/Swiss-Prot
  ZF_RING_2 UniProtKB/Swiss-Prot
SMART RING UniProtKB/Swiss-Prot
Superfamily-SCOP RING/U-box UniProtKB/Swiss-Prot
UniProt D3YUA4_MOUSE UniProtKB/TrEMBL
  D3YV13 ENTREZGENE, UniProtKB/TrEMBL
  D3Z4X6_MOUSE UniProtKB/TrEMBL
  DTX3_MOUSE UniProtKB/Swiss-Prot
  E9Q3J1 ENTREZGENE, UniProtKB/TrEMBL
  Q3UFK3 ENTREZGENE, UniProtKB/TrEMBL
  Q4FZD3 ENTREZGENE
  Q80V91 ENTREZGENE
  Q9ER06 ENTREZGENE
UniProt Secondary Q4FZD3 UniProtKB/Swiss-Prot
  Q9ER06 UniProtKB/Swiss-Prot
1 to 35 of 35 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-29 Dtx3  deltex 3, E3 ubiquitin ligase    deltex 3 homolog (Drosophila)  Symbol and/or name change 5135510 APPROVED