Sp6 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 96,904,395 - 96,915,565 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 96,904,220 - 96,915,560 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 97,013,569 - 97,024,739 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 97,013,394 - 97,024,734 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 96,874,883 - 96,886,052 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 96,829,659 - 96,840,824 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 106,665,454 - 106,676,055 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | D | NCBI | | | | | cM Map | 11 | 60.51 | NCBI | | | | |
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SP6 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 17 | 47,844,908 - 47,876,311 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 17 | 47,844,908 - 47,855,874 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 17 | 45,922,274 - 45,933,063 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 17 | 43,277,279 - 43,288,239 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 17 | 43,277,278 - 43,288,239 | NCBI | | | | | Celera | 17 | 42,375,084 - 42,386,045 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | q21.32 | NCBI | | | | | HuRef | 17 | 41,291,197 - 41,302,158 (-) | NCBI | | HuRef | | | CHM1_1 | 17 | 45,987,218 - 45,998,179 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 17 | 48,706,681 - 48,738,087 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Sp6 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 10 | 82,501,957 - 82,506,138 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 82,005,518 - 82,009,699 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 82,005,294 - 82,011,013 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 86,953,607 - 86,957,796 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 86,451,657 - 86,455,846 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 81,844,238 - 81,848,427 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 84,950,751 - 84,961,368 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 84,955,864 - 84,960,045 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 84,741,722 - 84,751,853 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 85,741,421 - 85,745,602 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 10 | 85,758,059 - 85,759,190 (+) | NCBI | | | | | Celera | 10 | 80,766,887 - 80,771,068 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q31 | NCBI | | | | |
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Sp6 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955451 | 13,264,756 - 13,270,104 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955451 | 13,264,537 - 13,270,104 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SP6 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 19 | 17,254,674 - 17,258,249 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 17 | 19,220,262 - 19,223,837 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 17 | 9,673,572 - 9,692,382 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 17 | 9,863,804 - 9,874,693 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 17 | 9,871,175 - 9,872,305 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SP6 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 9 | 24,175,979 - 24,183,245 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 24,178,438 - 24,179,568 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 23,644,007 - 23,652,241 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 24,971,025 - 24,979,266 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 24,973,486 - 24,974,616 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 23,741,134 - 23,749,372 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 24,001,979 - 24,010,212 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 24,128,664 - 24,136,901 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Sp6 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405602 | 23,607,525 - 23,613,413 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936490 | 13,456,393 - 13,465,684 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936490 | 13,456,393 - 13,466,813 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SP6 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 12 | 24,100,801 - 24,106,792 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 12 | 24,100,769 - 24,106,828 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 12 | 23,978,634 - 23,983,397 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SP6 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 16 | 68,243,319 - 68,276,951 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 16 | 68,247,695 - 68,248,825 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666077 | 39,295,985 - 39,302,284 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sp6 (Heterocephalus glaber - naked mole-rat) |
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